2015-09-29T07:23:52.069Z,1443511432.069 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T07:23:52.072Z,1443511432.072 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T07:23:52.072Z,1443511432.072 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T07:23:52.073Z,1443511432.073 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T07:23:52.075Z,1443511432.075 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T07:23:52.075Z,1443511432.075 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T07:23:52.078Z,1443511432.078 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T07:23:52.091Z,1443511432.091 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T07:23:52.095Z,1443511432.095 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T07:23:52.095Z,1443511432.095 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T07:23:52.096Z,1443511432.096 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T07:23:52.099Z,1443511432.099 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T07:23:52.099Z,1443511432.099 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T07:23:52.101Z,1443511432.101 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T07:23:52.102Z,1443511432.102 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T07:23:52.105Z,1443511432.105 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T07:23:52.500Z,1443511432.500 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T07:23:52.502Z,1443511432.502 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T07:23:52.695Z,1443511432.695 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T07:23:52.697Z,1443511432.697 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T07:23:52.844Z,1443511432.844 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T07:23:52.844Z,1443511432.844 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T07:23:52.992Z,1443511432.992 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T07:23:52.992Z,1443511432.992 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T07:23:53.087Z,1443511433.087 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T07:23:53.307Z,1443511433.307 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T07:23:53.308Z,1443511433.308 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T07:23:53.403Z,1443511433.403 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T07:23:53.404Z,1443511433.404 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T07:23:53.720Z,1443511433.720 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T07:23:53.721Z,1443511433.721 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T07:23:54.120Z,1443511434.120 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T07:23:54.121Z,1443511434.121 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T07:23:54.472Z,1443511434.472 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T07:23:54.474Z,1443511434.474 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T07:23:55.076Z,1443511435.076 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T07:23:55.077Z,1443511435.077 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T07:23:55.308Z,1443511435.308 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T07:23:55.308Z,1443511435.308 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T07:23:55.419Z,1443511435.419 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T07:23:55.420Z,1443511435.420 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T07:23:55.950Z,1443511435.950 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T07:23:55.950Z,1443511435.950 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T07:23:56.070Z,1443511436.070 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T07:23:56.072Z,1443511436.072 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T07:23:56.072Z,1443511436.072 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T07:23:56.077Z,1443511436.077 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T07:23:56.153Z,1443511436.153 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T07:23:56.290Z,1443511436.290 [VerticalControl] Loaded
2015-09-29T07:23:56.290Z,1443511436.290 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T07:23:56.291Z,1443511436.291 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T07:23:56.374Z,1443511436.374 [HorizontalControl] Loaded
2015-09-29T07:23:56.374Z,1443511436.374 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T07:23:56.375Z,1443511436.375 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T07:23:56.385Z,1443511436.385 [SpeedControl] Loaded
2015-09-29T07:23:56.386Z,1443511436.386 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T07:23:56.386Z,1443511436.386 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T07:23:56.387Z,1443511436.387 [LoopControl] Loaded
2015-09-29T07:23:56.387Z,1443511436.387 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T07:23:56.388Z,1443511436.388 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T07:23:56.388Z,1443511436.388 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T07:23:56.554Z,1443511436.554 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T07:23:56.570Z,1443511436.570 [SBIT] Loaded
2015-09-29T07:23:56.571Z,1443511436.571 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T07:23:56.571Z,1443511436.571 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T07:23:56.602Z,1443511436.602 [IBIT] Loaded
2015-09-29T07:23:56.602Z,1443511436.602 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T07:23:56.608Z,1443511436.608 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T07:23:56.767Z,1443511436.767 [CBIT] Loaded
2015-09-29T07:23:56.767Z,1443511436.767 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T07:23:56.767Z,1443511436.767 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T07:23:56.768Z,1443511436.768 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T07:23:56.810Z,1443511436.810 [DepthRateCalculator] Loaded
2015-09-29T07:23:56.810Z,1443511436.810 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T07:23:56.816Z,1443511436.816 [PitchRateCalculator] Loaded
2015-09-29T07:23:56.816Z,1443511436.816 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T07:23:56.832Z,1443511436.832 [SpeedCalculator] Loaded
2015-09-29T07:23:56.833Z,1443511436.833 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T07:23:56.850Z,1443511436.850 [TempGradientCalculator] Loaded
2015-09-29T07:23:56.851Z,1443511436.851 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T07:23:56.872Z,1443511436.872 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T07:23:56.873Z,1443511436.873 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T07:23:56.878Z,1443511436.878 [YawRateCalculator] Loaded
2015-09-29T07:23:56.879Z,1443511436.879 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T07:23:56.879Z,1443511436.879 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T07:23:56.880Z,1443511436.880 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T07:23:56.998Z,1443511436.998 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T07:23:56.998Z,1443511436.998 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T07:23:56.998Z,1443511436.998 [StratificationFrontDetector] Loaded
2015-09-29T07:23:56.998Z,1443511436.998 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T07:23:56.999Z,1443511436.999 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T07:23:56.000Z,1443511437.000 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T07:23:57.300Z,1443511437.300 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T07:23:57.300Z,1443511437.300 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T07:23:57.436Z,1443511437.436 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T07:23:57.436Z,1443511437.436 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T07:23:57.498Z,1443511437.498 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T07:23:57.498Z,1443511437.498 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T07:23:57.520Z,1443511437.520 [NavChart] Loaded
2015-09-29T07:23:57.521Z,1443511437.521 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T07:23:57.526Z,1443511437.526 [UniversalFixResidualReporter] Loaded
2015-09-29T07:23:57.526Z,1443511437.526 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T07:23:57.527Z,1443511437.527 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T07:23:57.527Z,1443511437.527 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T07:23:57.536Z,1443511437.536 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T07:23:57.537Z,1443511437.537 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T07:23:57.841Z,1443511437.841 [CTD_NeilBrown] Loaded
2015-09-29T07:23:57.842Z,1443511437.842 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T07:23:57.851Z,1443511437.851 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T07:23:57.851Z,1443511437.851 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T07:23:57.864Z,1443511437.864 [ISUS] Loaded
2015-09-29T07:23:57.865Z,1443511437.865 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T07:23:57.884Z,1443511437.884 [PAR_Licor] Loaded
2015-09-29T07:23:57.884Z,1443511437.884 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T07:23:57.941Z,1443511437.941 [WetLabsBB2FL] Loaded
2015-09-29T07:23:57.941Z,1443511437.941 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T07:23:57.943Z,1443511437.943 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T07:23:57.943Z,1443511437.943 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T07:23:57.944Z,1443511437.944 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T07:23:57.944Z,1443511437.944 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T07:23:58.686Z,1443511438.686 [AHRS_sp3003D] Loaded
2015-09-29T07:23:58.686Z,1443511438.686 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T07:23:58.872Z,1443511438.872 [DataOverHttps] Loaded
2015-09-29T07:23:58.872Z,1443511438.872 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T07:23:58.886Z,1443511438.886 [Depth_Keller] Loaded
2015-09-29T07:23:58.886Z,1443511438.886 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T07:23:58.896Z,1443511438.896 [DropWeight] Loaded
2015-09-29T07:23:58.896Z,1443511438.896 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T07:23:59.055Z,1443511439.055 [DVL_micro] Loaded
2015-09-29T07:23:59.056Z,1443511439.056 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T07:23:59.162Z,1443511439.162 [NAL9602] Loaded
2015-09-29T07:23:59.162Z,1443511439.162 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T07:23:59.210Z,1443511439.210 [Onboard] Loaded
2015-09-29T07:23:59.211Z,1443511439.211 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T07:23:59.227Z,1443511439.227 [Radio_Surface] Loaded
2015-09-29T07:23:59.227Z,1443511439.227 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T07:23:59.231Z,1443511439.231 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T07:23:59.231Z,1443511439.231 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T07:23:59.394Z,1443511439.394 [DAT] Loaded
2015-09-29T07:23:59.394Z,1443511439.394 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T07:23:59.401Z,1443511439.401 [SCPI] Loaded
2015-09-29T07:23:59.401Z,1443511439.401 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T07:23:59.402Z,1443511439.402 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T07:23:59.403Z,1443511439.403 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T07:23:59.541Z,1443511439.541 [BuoyancyServo] Loaded
2015-09-29T07:23:59.541Z,1443511439.541 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T07:23:59.554Z,1443511439.554 [ElevatorServo] Loaded
2015-09-29T07:23:59.554Z,1443511439.554 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T07:23:59.566Z,1443511439.566 [MassServo] Loaded
2015-09-29T07:23:59.567Z,1443511439.567 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T07:23:59.583Z,1443511439.583 [RudderServo] Loaded
2015-09-29T07:23:59.583Z,1443511439.583 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T07:23:59.595Z,1443511439.595 [ThrusterServo] Loaded
2015-09-29T07:23:59.595Z,1443511439.595 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T07:23:59.596Z,1443511439.596 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T07:23:59.596Z,1443511439.596 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T07:23:59.801Z,1443511439.801 [InternalSim] Loaded
2015-09-29T07:23:59.801Z,1443511439.801 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T07:23:59.802Z,1443511439.802 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T07:23:59.803Z,1443511439.803 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T07:23:59.847Z,1443511439.847 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T07:23:59.851Z,1443511439.851 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T07:23:59.852Z,1443511439.852 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T07:23:59.858Z,1443511439.858 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T07:23:59.863Z,1443511439.863 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T07:23:59.863Z,1443511439.863 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T07:23:59.868Z,1443511439.868 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T07:23:59.868Z,1443511439.868 [Supervisor](DEBUG): Running supervisor.
2015-09-29T07:23:59.869Z,1443511439.869 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T07:23:59.875Z,1443511439.875 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T07:23:59.876Z,1443511439.876 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T07:23:59.877Z,1443511439.877 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T07:23:59.878Z,1443511439.878 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T07:23:59.879Z,1443511439.879 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T07:23:59.880Z,1443511439.880 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T07:23:59.880Z,1443511439.880 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T07:23:59.881Z,1443511439.881 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T07:23:59.882Z,1443511439.882 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T07:23:59.882Z,1443511439.882 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T07:23:59.883Z,1443511439.883 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T07:23:59.884Z,1443511439.884 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T07:23:59.885Z,1443511439.885 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T07:23:59.885Z,1443511439.885 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T07:23:59.885Z,1443511439.885 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T07:23:59.885Z,1443511439.885 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T07:23:59.886Z,1443511439.886 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T07:23:59.886Z,1443511439.886 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T07:23:59.886Z,1443511439.886 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T07:23:59.887Z,1443511439.887 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T07:23:59.888Z,1443511439.888 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T07:23:59.888Z,1443511439.888 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T07:23:59.889Z,1443511439.889 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T07:23:59.889Z,1443511439.889 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T07:23:59.890Z,1443511439.890 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T07:23:59.890Z,1443511439.890 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T07:23:59.890Z,1443511439.890 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T07:23:59.891Z,1443511439.891 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T07:23:59.891Z,1443511439.891 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T07:23:59.896Z,1443511439.896 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T07:23:59.919Z,1443511439.919 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T07:23:59.959Z,1443511439.959 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T07:24:00.031Z,1443511440.031 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T07:24:00.039Z,1443511440.039 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T07:24:00.119Z,1443511440.119 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T07:24:00.134Z,1443511440.134 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T07:24:00.139Z,1443511440.139 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T07:24:00.140Z,1443511440.140 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T07:24:00.140Z,1443511440.140 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T07:24:00.140Z,1443511440.140 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T07:24:00.140Z,1443511440.140 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T07:24:00.140Z,1443511440.140 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T07:24:00.141Z,1443511440.141 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T07:24:00.141Z,1443511440.141 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T07:24:00.171Z,1443511440.171 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T07:24:00.260Z,1443511440.260 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T07:24:00.270Z,1443511440.270 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T07:24:00.287Z,1443511440.287 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T07:24:00.336Z,1443511440.336 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T07:24:00.337Z,1443511440.337 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T07:24:00.388Z,1443511440.388 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T07:24:00.390Z,1443511440.390 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T07:24:00.413Z,1443511440.413 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T07:24:00.416Z,1443511440.416 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T07:24:00.428Z,1443511440.428 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T07:24:00.635Z,1443511440.635 [DVL_micro](INFO): Initializing
2015-09-29T07:24:00.792Z,1443511440.792 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:24:00.816Z,1443511440.816 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:24:00.932Z,1443511440.932 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T07:24:00.943Z,1443511440.943 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T07:24:00.971Z,1443511440.971 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T07:24:00.990Z,1443511440.990 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T07:24:00.996Z,1443511440.996 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T07:24:01.239Z,1443511441.239 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:24:01.240Z,1443511441.240 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:24:10.359Z,1443511450.359 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:10.715Z,1443511450.715 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:10.841Z,1443511450.841 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:11.242Z,1443511451.242 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T07:24:11.245Z,1443511451.245 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:11.640Z,1443511451.640 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:12.040Z,1443511452.040 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:12.440Z,1443511452.440 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:12.841Z,1443511452.841 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:13.240Z,1443511453.240 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:13.639Z,1443511453.639 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:14.039Z,1443511454.039 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:14.445Z,1443511454.445 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:14.840Z,1443511454.840 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:15.249Z,1443511455.249 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:15.639Z,1443511455.639 [NAL9602](INFO): No messages in MT queue
2015-09-29T07:24:15.640Z,1443511455.640 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:16.049Z,1443511456.049 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:16.449Z,1443511456.449 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:16.849Z,1443511456.849 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:17.249Z,1443511457.249 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:17.649Z,1443511457.649 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:18.049Z,1443511458.049 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:18.449Z,1443511458.449 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:18.847Z,1443511458.847 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:19.239Z,1443511459.239 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:19.639Z,1443511459.639 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:20.040Z,1443511460.040 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:20.439Z,1443511460.439 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:20.474Z,1443511460.474 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T07:24:20.840Z,1443511460.840 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:21.240Z,1443511461.240 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:21.640Z,1443511461.640 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:22.040Z,1443511462.040 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:22.440Z,1443511462.440 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:22.840Z,1443511462.840 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:23.240Z,1443511463.240 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:23.641Z,1443511463.641 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:24.040Z,1443511464.040 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:24.440Z,1443511464.440 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:24:24.840Z,1443511464.840 [D