2015-09-29T07:15:55.367Z,1443510955.367 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T07:15:55.370Z,1443510955.370 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T07:15:55.370Z,1443510955.370 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T07:15:55.371Z,1443510955.371 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T07:15:55.374Z,1443510955.374 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T07:15:55.374Z,1443510955.374 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T07:15:55.377Z,1443510955.377 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T07:15:55.391Z,1443510955.391 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T07:15:55.394Z,1443510955.394 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T07:15:55.394Z,1443510955.394 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T07:15:55.395Z,1443510955.395 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T07:15:55.398Z,1443510955.398 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T07:15:55.398Z,1443510955.398 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T07:15:55.401Z,1443510955.401 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T07:15:55.401Z,1443510955.401 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T07:15:55.405Z,1443510955.405 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T07:15:55.831Z,1443510955.831 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T07:15:55.833Z,1443510955.833 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T07:15:56.038Z,1443510956.038 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T07:15:56.040Z,1443510956.040 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T07:15:56.191Z,1443510956.191 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T07:15:56.191Z,1443510956.191 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T07:15:56.347Z,1443510956.347 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T07:15:56.347Z,1443510956.347 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T07:15:56.447Z,1443510956.447 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T07:15:56.679Z,1443510956.679 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T07:15:56.680Z,1443510956.680 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T07:15:56.778Z,1443510956.778 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T07:15:56.779Z,1443510956.779 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T07:15:57.109Z,1443510957.109 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T07:15:57.110Z,1443510957.110 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T07:15:57.527Z,1443510957.527 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T07:15:57.528Z,1443510957.528 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T07:15:57.909Z,1443510957.909 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T07:15:57.911Z,1443510957.911 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T07:15:58.537Z,1443510958.537 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T07:15:58.538Z,1443510958.538 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T07:15:58.798Z,1443510958.798 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T07:15:58.799Z,1443510958.799 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T07:15:58.967Z,1443510958.967 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T07:15:58.967Z,1443510958.967 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T07:15:59.515Z,1443510959.515 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T07:15:59.516Z,1443510959.516 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T07:15:59.645Z,1443510959.645 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T07:15:59.648Z,1443510959.648 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T07:15:59.648Z,1443510959.648 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T07:15:59.653Z,1443510959.653 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T07:15:59.727Z,1443510959.727 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T07:15:59.866Z,1443510959.866 [VerticalControl] Loaded
2015-09-29T07:15:59.866Z,1443510959.866 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T07:15:59.867Z,1443510959.867 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T07:15:59.950Z,1443510959.950 [HorizontalControl] Loaded
2015-09-29T07:15:59.950Z,1443510959.950 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T07:15:59.951Z,1443510959.951 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T07:15:59.961Z,1443510959.961 [SpeedControl] Loaded
2015-09-29T07:15:59.962Z,1443510959.962 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T07:15:59.962Z,1443510959.962 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T07:15:59.963Z,1443510959.963 [LoopControl] Loaded
2015-09-29T07:15:59.963Z,1443510959.963 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T07:15:59.964Z,1443510959.964 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T07:15:59.965Z,1443510959.965 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T07:16:00.125Z,1443510960.125 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T07:16:00.138Z,1443510960.138 [SBIT] Loaded
2015-09-29T07:16:00.138Z,1443510960.138 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T07:16:00.139Z,1443510960.139 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T07:16:00.178Z,1443510960.178 [IBIT] Loaded
2015-09-29T07:16:00.179Z,1443510960.179 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T07:16:00.181Z,1443510960.181 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T07:16:00.334Z,1443510960.334 [CBIT] Loaded
2015-09-29T07:16:00.334Z,1443510960.334 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T07:16:00.335Z,1443510960.335 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T07:16:00.336Z,1443510960.336 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T07:16:00.377Z,1443510960.377 [DepthRateCalculator] Loaded
2015-09-29T07:16:00.377Z,1443510960.377 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T07:16:00.383Z,1443510960.383 [PitchRateCalculator] Loaded
2015-09-29T07:16:00.383Z,1443510960.383 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T07:16:00.395Z,1443510960.395 [SpeedCalculator] Loaded
2015-09-29T07:16:00.395Z,1443510960.395 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T07:16:00.417Z,1443510960.417 [TempGradientCalculator] Loaded
2015-09-29T07:16:00.418Z,1443510960.418 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T07:16:00.439Z,1443510960.439 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T07:16:00.440Z,1443510960.440 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T07:16:00.445Z,1443510960.445 [YawRateCalculator] Loaded
2015-09-29T07:16:00.446Z,1443510960.446 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T07:16:00.446Z,1443510960.446 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T07:16:00.447Z,1443510960.447 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T07:16:00.569Z,1443510960.569 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T07:16:00.569Z,1443510960.569 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T07:16:00.570Z,1443510960.570 [StratificationFrontDetector] Loaded
2015-09-29T07:16:00.570Z,1443510960.570 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T07:16:00.571Z,1443510960.571 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T07:16:00.571Z,1443510960.571 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T07:16:00.869Z,1443510960.869 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T07:16:00.870Z,1443510960.870 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T07:16:01.002Z,1443510961.002 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T07:16:01.002Z,1443510961.002 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T07:16:01.068Z,1443510961.068 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T07:16:01.068Z,1443510961.068 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T07:16:01.087Z,1443510961.087 [NavChart] Loaded
2015-09-29T07:16:01.087Z,1443510961.087 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T07:16:01.092Z,1443510961.092 [UniversalFixResidualReporter] Loaded
2015-09-29T07:16:01.093Z,1443510961.093 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T07:16:01.093Z,1443510961.093 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T07:16:01.094Z,1443510961.094 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T07:16:01.104Z,1443510961.104 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T07:16:01.104Z,1443510961.104 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T07:16:01.404Z,1443510961.404 [CTD_NeilBrown] Loaded
2015-09-29T07:16:01.404Z,1443510961.404 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T07:16:01.406Z,1443510961.406 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T07:16:01.406Z,1443510961.406 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T07:16:01.420Z,1443510961.420 [ISUS] Loaded
2015-09-29T07:16:01.420Z,1443510961.420 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T07:16:01.435Z,1443510961.435 [PAR_Licor] Loaded
2015-09-29T07:16:01.435Z,1443510961.435 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T07:16:01.496Z,1443510961.496 [WetLabsBB2FL] Loaded
2015-09-29T07:16:01.497Z,1443510961.497 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T07:16:01.502Z,1443510961.502 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T07:16:01.502Z,1443510961.502 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T07:16:01.503Z,1443510961.503 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T07:16:01.504Z,1443510961.504 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T07:16:02.234Z,1443510962.234 [AHRS_sp3003D] Loaded
2015-09-29T07:16:02.234Z,1443510962.234 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T07:16:02.431Z,1443510962.431 [DataOverHttps] Loaded
2015-09-29T07:16:02.431Z,1443510962.431 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T07:16:02.445Z,1443510962.445 [Depth_Keller] Loaded
2015-09-29T07:16:02.446Z,1443510962.446 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T07:16:02.451Z,1443510962.451 [DropWeight] Loaded
2015-09-29T07:16:02.451Z,1443510962.451 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T07:16:02.610Z,1443510962.610 [DVL_micro] Loaded
2015-09-29T07:16:02.610Z,1443510962.610 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T07:16:02.719Z,1443510962.719 [NAL9602] Loaded
2015-09-29T07:16:02.720Z,1443510962.720 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T07:16:02.768Z,1443510962.768 [Onboard] Loaded
2015-09-29T07:16:02.768Z,1443510962.768 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T07:16:02.780Z,1443510962.780 [Radio_Surface] Loaded
2015-09-29T07:16:02.780Z,1443510962.780 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T07:16:02.782Z,1443510962.782 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T07:16:02.782Z,1443510962.782 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T07:16:02.944Z,1443510962.944 [DAT] Loaded
2015-09-29T07:16:02.944Z,1443510962.944 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T07:16:02.951Z,1443510962.951 [SCPI] Loaded
2015-09-29T07:16:02.952Z,1443510962.952 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T07:16:02.952Z,1443510962.952 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T07:16:02.953Z,1443510962.953 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T07:16:03.089Z,1443510963.089 [BuoyancyServo] Loaded
2015-09-29T07:16:03.089Z,1443510963.089 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T07:16:03.103Z,1443510963.103 [ElevatorServo] Loaded
2015-09-29T07:16:03.103Z,1443510963.103 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T07:16:03.115Z,1443510963.115 [MassServo] Loaded
2015-09-29T07:16:03.116Z,1443510963.116 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T07:16:03.132Z,1443510963.132 [RudderServo] Loaded
2015-09-29T07:16:03.132Z,1443510963.132 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T07:16:03.144Z,1443510963.144 [ThrusterServo] Loaded
2015-09-29T07:16:03.145Z,1443510963.145 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T07:16:03.145Z,1443510963.145 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T07:16:03.146Z,1443510963.146 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T07:16:03.350Z,1443510963.350 [InternalSim] Loaded
2015-09-29T07:16:03.350Z,1443510963.350 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T07:16:03.351Z,1443510963.351 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T07:16:03.352Z,1443510963.352 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T07:16:03.395Z,1443510963.395 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T07:16:03.399Z,1443510963.399 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T07:16:03.400Z,1443510963.400 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T07:16:03.407Z,1443510963.407 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T07:16:03.410Z,1443510963.410 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T07:16:03.410Z,1443510963.410 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T07:16:03.415Z,1443510963.415 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T07:16:03.416Z,1443510963.416 [Supervisor](DEBUG): Running supervisor.
2015-09-29T07:16:03.416Z,1443510963.416 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T07:16:03.422Z,1443510963.422 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T07:16:03.423Z,1443510963.423 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T07:16:03.424Z,1443510963.424 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T07:16:03.426Z,1443510963.426 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T07:16:03.426Z,1443510963.426 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T07:16:03.427Z,1443510963.427 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T07:16:03.427Z,1443510963.427 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T07:16:03.428Z,1443510963.428 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T07:16:03.429Z,1443510963.429 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T07:16:03.430Z,1443510963.430 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T07:16:03.431Z,1443510963.431 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T07:16:03.431Z,1443510963.431 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T07:16:03.432Z,1443510963.432 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T07:16:03.432Z,1443510963.432 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T07:16:03.432Z,1443510963.432 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T07:16:03.433Z,1443510963.433 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T07:16:03.433Z,1443510963.433 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T07:16:03.433Z,1443510963.433 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T07:16:03.433Z,1443510963.433 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T07:16:03.434Z,1443510963.434 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T07:16:03.435Z,1443510963.435 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T07:16:03.435Z,1443510963.435 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T07:16:03.436Z,1443510963.436 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T07:16:03.436Z,1443510963.436 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T07:16:03.437Z,1443510963.437 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T07:16:03.437Z,1443510963.437 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T07:16:03.437Z,1443510963.437 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T07:16:03.438Z,1443510963.438 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T07:16:03.438Z,1443510963.438 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T07:16:03.443Z,1443510963.443 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T07:16:03.478Z,1443510963.478 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T07:16:03.566Z,1443510963.566 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T07:16:03.575Z,1443510963.575 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T07:16:03.617Z,1443510963.617 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T07:16:03.635Z,1443510963.635 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T07:16:03.645Z,1443510963.645 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T07:16:03.655Z,1443510963.655 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T07:16:03.662Z,1443510963.662 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T07:16:03.663Z,1443510963.663 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T07:16:03.663Z,1443510963.663 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T07:16:03.663Z,1443510963.663 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T07:16:03.663Z,1443510963.663 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T07:16:03.664Z,1443510963.664 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T07:16:03.664Z,1443510963.664 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T07:16:03.664Z,1443510963.664 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T07:16:03.711Z,1443510963.711 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T07:16:03.748Z,1443510963.748 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T07:16:03.749Z,1443510963.749 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T07:16:03.822Z,1443510963.822 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T07:16:03.823Z,1443510963.823 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T07:16:03.850Z,1443510963.850 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T07:16:03.873Z,1443510963.873 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T07:16:03.900Z,1443510963.900 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T07:16:03.910Z,1443510963.910 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T07:16:03.924Z,1443510963.924 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T07:16:04.142Z,1443510964.142 [DVL_micro](INFO): Initializing
2015-09-29T07:16:04.294Z,1443510964.294 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:16:04.307Z,1443510964.307 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:16:04.416Z,1443510964.416 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T07:16:04.442Z,1443510964.442 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T07:16:04.458Z,1443510964.458 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T07:16:04.471Z,1443510964.471 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T07:16:04.482Z,1443510964.482 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T07:16:04.720Z,1443510964.720 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:16:04.721Z,1443510964.721 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:16:13.654Z,1443510973.654 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:13.981Z,1443510973.981 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:14.112Z,1443510974.112 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:14.514Z,1443510974.514 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T07:16:14.517Z,1443510974.517 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:14.911Z,1443510974.911 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:15.311Z,1443510975.311 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:15.711Z,1443510975.711 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:16.110Z,1443510976.110 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:16.511Z,1443510976.511 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:16.920Z,1443510976.920 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:17.311Z,1443510977.311 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:17.711Z,1443510977.711 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:18.111Z,1443510978.111 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:18.511Z,1443510978.511 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:18.909Z,1443510978.909 [NAL9602](INFO): No messages in MT queue
2015-09-29T07:16:18.910Z,1443510978.910 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:19.310Z,1443510979.310 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:19.712Z,1443510979.712 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:20.111Z,1443510980.111 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:20.511Z,1443510980.511 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:20.911Z,1443510980.911 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:21.311Z,1443510981.311 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:21.711Z,1443510981.711 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:22.111Z,1443510982.111 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:22.511Z,1443510982.511 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:22.925Z,1443510982.925 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:23.310Z,1443510983.310 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:23.710Z,1443510983.710 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:24.111Z,1443510984.111 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:24.144Z,1443510984.144 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T07:16:24.510Z,1443510984.510 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:24.911Z,1443510984.911 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:25.312Z,1443510985.312 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:25.711Z,1443510985.711 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:26.111Z,1443510986.111 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:26.511Z,1443510986.511 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:26.911Z,1443510986.911 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:27.311Z,1443510987.311 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:27.710Z,1443510987.710 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:16:28.111Z,1443510988.111 [D