2015-09-29T07:00:10.491Z,1443510010.491 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T07:00:10.494Z,1443510010.494 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T07:00:10.494Z,1443510010.494 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T07:00:10.495Z,1443510010.495 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T07:00:10.498Z,1443510010.498 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T07:00:10.498Z,1443510010.498 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T07:00:10.501Z,1443510010.501 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T07:00:10.514Z,1443510010.514 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T07:00:10.518Z,1443510010.518 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T07:00:10.518Z,1443510010.518 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T07:00:10.519Z,1443510010.519 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T07:00:10.522Z,1443510010.522 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T07:00:10.522Z,1443510010.522 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T07:00:10.524Z,1443510010.524 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T07:00:10.525Z,1443510010.525 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T07:00:10.528Z,1443510010.528 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T07:00:10.971Z,1443510010.971 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T07:00:10.973Z,1443510010.973 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T07:00:11.182Z,1443510011.182 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T07:00:11.184Z,1443510011.184 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T07:00:11.343Z,1443510011.343 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T07:00:11.343Z,1443510011.343 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T07:00:11.499Z,1443510011.499 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T07:00:11.499Z,1443510011.499 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T07:00:11.599Z,1443510011.599 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T07:00:11.834Z,1443510011.834 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T07:00:11.835Z,1443510011.835 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T07:00:11.934Z,1443510011.934 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T07:00:11.935Z,1443510011.935 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T07:00:12.283Z,1443510012.283 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T07:00:12.284Z,1443510012.284 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T07:00:12.719Z,1443510012.719 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T07:00:12.720Z,1443510012.720 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T07:00:13.111Z,1443510013.111 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T07:00:13.113Z,1443510013.113 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T07:00:13.773Z,1443510013.773 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T07:00:13.774Z,1443510013.774 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T07:00:14.038Z,1443510014.038 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T07:00:14.039Z,1443510014.039 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T07:00:14.209Z,1443510014.209 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T07:00:14.210Z,1443510014.210 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T07:00:14.775Z,1443510014.775 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T07:00:14.776Z,1443510014.776 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T07:00:14.910Z,1443510014.910 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T07:00:14.912Z,1443510014.912 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T07:00:14.913Z,1443510014.913 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T07:00:14.917Z,1443510014.917 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T07:00:14.999Z,1443510014.999 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T07:00:15.146Z,1443510015.146 [VerticalControl] Loaded
2015-09-29T07:00:15.146Z,1443510015.146 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T07:00:15.147Z,1443510015.147 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T07:00:15.240Z,1443510015.240 [HorizontalControl] Loaded
2015-09-29T07:00:15.240Z,1443510015.240 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T07:00:15.241Z,1443510015.241 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T07:00:15.247Z,1443510015.247 [SpeedControl] Loaded
2015-09-29T07:00:15.248Z,1443510015.248 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T07:00:15.248Z,1443510015.248 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T07:00:15.249Z,1443510015.249 [LoopControl] Loaded
2015-09-29T07:00:15.249Z,1443510015.249 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T07:00:15.250Z,1443510015.250 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T07:00:15.251Z,1443510015.251 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T07:00:15.425Z,1443510015.425 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T07:00:15.438Z,1443510015.438 [SBIT] Loaded
2015-09-29T07:00:15.438Z,1443510015.438 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T07:00:15.439Z,1443510015.439 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T07:00:15.476Z,1443510015.476 [IBIT] Loaded
2015-09-29T07:00:15.476Z,1443510015.476 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T07:00:15.478Z,1443510015.478 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T07:00:15.653Z,1443510015.653 [CBIT] Loaded
2015-09-29T07:00:15.653Z,1443510015.653 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T07:00:15.654Z,1443510015.654 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T07:00:15.655Z,1443510015.655 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T07:00:15.698Z,1443510015.698 [DepthRateCalculator] Loaded
2015-09-29T07:00:15.698Z,1443510015.698 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T07:00:15.705Z,1443510015.705 [PitchRateCalculator] Loaded
2015-09-29T07:00:15.705Z,1443510015.705 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T07:00:15.718Z,1443510015.718 [SpeedCalculator] Loaded
2015-09-29T07:00:15.718Z,1443510015.718 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T07:00:15.741Z,1443510015.741 [TempGradientCalculator] Loaded
2015-09-29T07:00:15.742Z,1443510015.742 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T07:00:15.765Z,1443510015.765 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T07:00:15.765Z,1443510015.765 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T07:00:15.771Z,1443510015.771 [YawRateCalculator] Loaded
2015-09-29T07:00:15.772Z,1443510015.772 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T07:00:15.772Z,1443510015.772 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T07:00:15.773Z,1443510015.773 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T07:00:15.901Z,1443510015.901 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T07:00:15.905Z,1443510015.905 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T07:00:15.906Z,1443510015.906 [StratificationFrontDetector] Loaded
2015-09-29T07:00:15.906Z,1443510015.906 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T07:00:15.907Z,1443510015.907 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T07:00:15.907Z,1443510015.907 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T07:00:16.241Z,1443510016.241 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T07:00:16.242Z,1443510016.242 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T07:00:16.386Z,1443510016.386 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T07:00:16.386Z,1443510016.386 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T07:00:16.454Z,1443510016.454 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T07:00:16.454Z,1443510016.454 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T07:00:16.478Z,1443510016.478 [NavChart] Loaded
2015-09-29T07:00:16.478Z,1443510016.478 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T07:00:16.484Z,1443510016.484 [UniversalFixResidualReporter] Loaded
2015-09-29T07:00:16.484Z,1443510016.484 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T07:00:16.484Z,1443510016.484 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T07:00:16.485Z,1443510016.485 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T07:00:16.494Z,1443510016.494 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T07:00:16.495Z,1443510016.495 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T07:00:16.820Z,1443510016.820 [CTD_NeilBrown] Loaded
2015-09-29T07:00:16.820Z,1443510016.820 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T07:00:16.822Z,1443510016.822 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T07:00:16.822Z,1443510016.822 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T07:00:16.836Z,1443510016.836 [ISUS] Loaded
2015-09-29T07:00:16.837Z,1443510016.837 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T07:00:16.857Z,1443510016.857 [PAR_Licor] Loaded
2015-09-29T07:00:16.857Z,1443510016.857 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T07:00:16.919Z,1443510016.919 [WetLabsBB2FL] Loaded
2015-09-29T07:00:16.920Z,1443510016.920 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T07:00:16.922Z,1443510016.922 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T07:00:16.922Z,1443510016.922 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T07:00:16.923Z,1443510016.923 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T07:00:16.923Z,1443510016.923 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T07:00:17.681Z,1443510017.681 [AHRS_sp3003D] Loaded
2015-09-29T07:00:17.681Z,1443510017.681 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T07:00:17.877Z,1443510017.877 [DataOverHttps] Loaded
2015-09-29T07:00:17.878Z,1443510017.878 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T07:00:17.892Z,1443510017.892 [Depth_Keller] Loaded
2015-09-29T07:00:17.893Z,1443510017.893 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T07:00:17.898Z,1443510017.898 [DropWeight] Loaded
2015-09-29T07:00:17.899Z,1443510017.899 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T07:00:18.072Z,1443510018.072 [DVL_micro] Loaded
2015-09-29T07:00:18.072Z,1443510018.072 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T07:00:18.192Z,1443510018.192 [NAL9602] Loaded
2015-09-29T07:00:18.193Z,1443510018.193 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T07:00:18.249Z,1443510018.249 [Onboard] Loaded
2015-09-29T07:00:18.249Z,1443510018.249 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T07:00:18.262Z,1443510018.262 [Radio_Surface] Loaded
2015-09-29T07:00:18.262Z,1443510018.262 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T07:00:18.266Z,1443510018.266 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T07:00:18.266Z,1443510018.266 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T07:00:18.443Z,1443510018.443 [DAT] Loaded
2015-09-29T07:00:18.443Z,1443510018.443 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T07:00:18.451Z,1443510018.451 [SCPI] Loaded
2015-09-29T07:00:18.451Z,1443510018.451 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T07:00:18.452Z,1443510018.452 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T07:00:18.452Z,1443510018.452 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T07:00:18.600Z,1443510018.600 [BuoyancyServo] Loaded
2015-09-29T07:00:18.600Z,1443510018.600 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T07:00:18.614Z,1443510018.614 [ElevatorServo] Loaded
2015-09-29T07:00:18.615Z,1443510018.615 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T07:00:18.631Z,1443510018.631 [MassServo] Loaded
2015-09-29T07:00:18.632Z,1443510018.632 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T07:00:18.645Z,1443510018.645 [RudderServo] Loaded
2015-09-29T07:00:18.645Z,1443510018.645 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T07:00:18.657Z,1443510018.657 [ThrusterServo] Loaded
2015-09-29T07:00:18.658Z,1443510018.658 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T07:00:18.658Z,1443510018.658 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T07:00:18.659Z,1443510018.659 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T07:00:18.892Z,1443510018.892 [InternalSim] Loaded
2015-09-29T07:00:18.892Z,1443510018.892 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T07:00:18.893Z,1443510018.893 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T07:00:18.893Z,1443510018.893 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T07:00:18.939Z,1443510018.939 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T07:00:18.944Z,1443510018.944 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T07:00:18.944Z,1443510018.944 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T07:00:18.951Z,1443510018.951 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T07:00:18.954Z,1443510018.954 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T07:00:18.954Z,1443510018.954 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T07:00:18.959Z,1443510018.959 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T07:00:18.959Z,1443510018.959 [Supervisor](DEBUG): Running supervisor.
2015-09-29T07:00:18.960Z,1443510018.960 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T07:00:18.966Z,1443510018.966 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T07:00:18.967Z,1443510018.967 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T07:00:18.967Z,1443510018.967 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T07:00:18.969Z,1443510018.969 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T07:00:18.970Z,1443510018.970 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T07:00:18.971Z,1443510018.971 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T07:00:18.971Z,1443510018.971 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T07:00:18.972Z,1443510018.972 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T07:00:18.973Z,1443510018.973 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T07:00:18.973Z,1443510018.973 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T07:00:18.974Z,1443510018.974 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T07:00:18.975Z,1443510018.975 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T07:00:18.976Z,1443510018.976 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T07:00:18.976Z,1443510018.976 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T07:00:18.976Z,1443510018.976 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T07:00:18.976Z,1443510018.976 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T07:00:18.977Z,1443510018.977 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T07:00:18.977Z,1443510018.977 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T07:00:18.977Z,1443510018.977 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T07:00:18.978Z,1443510018.978 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T07:00:18.979Z,1443510018.979 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T07:00:18.979Z,1443510018.979 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T07:00:18.980Z,1443510018.980 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T07:00:18.980Z,1443510018.980 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T07:00:18.981Z,1443510018.981 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T07:00:18.981Z,1443510018.981 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T07:00:18.981Z,1443510018.981 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T07:00:18.982Z,1443510018.982 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T07:00:18.982Z,1443510018.982 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T07:00:18.987Z,1443510018.987 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T07:00:19.022Z,1443510019.022 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T07:00:19.126Z,1443510019.126 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T07:00:19.146Z,1443510019.146 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T07:00:19.190Z,1443510019.190 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T07:00:19.210Z,1443510019.210 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T07:00:19.222Z,1443510019.222 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T07:00:19.258Z,1443510019.258 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T07:00:19.262Z,1443510019.262 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T07:00:19.262Z,1443510019.262 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T07:00:19.263Z,1443510019.263 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T07:00:19.263Z,1443510019.263 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T07:00:19.263Z,1443510019.263 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T07:00:19.263Z,1443510019.263 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T07:00:19.264Z,1443510019.264 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T07:00:19.264Z,1443510019.264 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T07:00:19.329Z,1443510019.329 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T07:00:19.345Z,1443510019.345 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T07:00:19.354Z,1443510019.354 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T07:00:19.412Z,1443510019.412 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T07:00:19.413Z,1443510019.413 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T07:00:19.443Z,1443510019.443 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T07:00:19.463Z,1443510019.463 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T07:00:19.489Z,1443510019.489 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T07:00:19.492Z,1443510019.492 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T07:00:19.498Z,1443510019.498 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T07:00:19.742Z,1443510019.742 [DVL_micro](INFO): Initializing
2015-09-29T07:00:19.898Z,1443510019.898 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:00:19.905Z,1443510019.905 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:00:20.038Z,1443510020.038 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T07:00:20.052Z,1443510020.052 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T07:00:20.062Z,1443510020.062 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T07:00:20.079Z,1443510020.079 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T07:00:20.087Z,1443510020.087 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T07:00:20.342Z,1443510020.342 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:00:20.343Z,1443510020.343 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:00:29.377Z,1443510029.377 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:29.757Z,1443510029.757 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:29.877Z,1443510029.877 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:30.249Z,1443510030.249 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T07:00:30.252Z,1443510030.252 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:30.647Z,1443510030.647 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:31.048Z,1443510031.048 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:31.447Z,1443510031.447 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:31.846Z,1443510031.846 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:32.246Z,1443510032.246 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:32.647Z,1443510032.647 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:33.046Z,1443510033.046 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:33.446Z,1443510033.446 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:33.848Z,1443510033.848 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:34.247Z,1443510034.247 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:34.645Z,1443510034.645 [NAL9602](INFO): No messages in MT queue
2015-09-29T07:00:34.646Z,1443510034.646 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:35.046Z,1443510035.046 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:35.446Z,1443510035.446 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:35.846Z,1443510035.846 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:36.247Z,1443510036.247 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:36.646Z,1443510036.646 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:37.046Z,1443510037.046 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:37.446Z,1443510037.446 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:37.846Z,1443510037.846 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:38.246Z,1443510038.246 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:38.647Z,1443510038.647 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:39.046Z,1443510039.046 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:39.447Z,1443510039.447 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:39.460Z,1443510039.460 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T07:00:39.846Z,1443510039.846 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:40.247Z,1443510040.247 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:40.646Z,1443510040.646 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:41.047Z,1443510041.047 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:41.447Z,1443510041.447 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:41.846Z,1443510041.846 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:42.247Z,1443510042.247 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:42.646Z,1443510042.646 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:43.046Z,1443510043.046 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:43.446Z,1443510043.446 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:00:43.847Z,1443510043.847 [D