2015-09-29T06:52:11.668Z,1443509531.668 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T06:52:11.671Z,1443509531.671 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T06:52:11.672Z,1443509531.672 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T06:52:11.672Z,1443509531.672 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T06:52:11.675Z,1443509531.675 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T06:52:11.676Z,1443509531.676 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T06:52:11.679Z,1443509531.679 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T06:52:11.691Z,1443509531.691 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T06:52:11.695Z,1443509531.695 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T06:52:11.696Z,1443509531.696 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T06:52:11.697Z,1443509531.697 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T06:52:11.699Z,1443509531.699 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T06:52:11.700Z,1443509531.700 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T06:52:11.702Z,1443509531.702 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T06:52:11.702Z,1443509531.702 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T06:52:11.706Z,1443509531.706 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T06:52:12.123Z,1443509532.123 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T06:52:12.125Z,1443509532.125 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T06:52:12.320Z,1443509532.320 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T06:52:12.322Z,1443509532.322 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T06:52:12.468Z,1443509532.468 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T06:52:12.469Z,1443509532.469 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T06:52:12.620Z,1443509532.620 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T06:52:12.621Z,1443509532.621 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T06:52:12.717Z,1443509532.717 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T06:52:12.944Z,1443509532.944 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T06:52:12.945Z,1443509532.945 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T06:52:13.044Z,1443509533.044 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T06:52:13.045Z,1443509533.045 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T06:52:13.368Z,1443509533.368 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T06:52:13.369Z,1443509533.369 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T06:52:13.784Z,1443509533.784 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T06:52:13.785Z,1443509533.785 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T06:52:14.150Z,1443509534.150 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T06:52:14.156Z,1443509534.156 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T06:52:14.773Z,1443509534.773 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T06:52:14.774Z,1443509534.774 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T06:52:15.017Z,1443509535.017 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T06:52:15.017Z,1443509535.017 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T06:52:15.131Z,1443509535.131 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T06:52:15.132Z,1443509535.132 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T06:52:15.729Z,1443509535.729 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T06:52:15.730Z,1443509535.730 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T06:52:15.860Z,1443509535.860 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T06:52:15.862Z,1443509535.862 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T06:52:15.862Z,1443509535.862 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T06:52:15.867Z,1443509535.867 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T06:52:15.944Z,1443509535.944 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T06:52:16.081Z,1443509536.081 [VerticalControl] Loaded
2015-09-29T06:52:16.081Z,1443509536.081 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T06:52:16.082Z,1443509536.082 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T06:52:16.164Z,1443509536.164 [HorizontalControl] Loaded
2015-09-29T06:52:16.165Z,1443509536.165 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T06:52:16.165Z,1443509536.165 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T06:52:16.175Z,1443509536.175 [SpeedControl] Loaded
2015-09-29T06:52:16.176Z,1443509536.176 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T06:52:16.176Z,1443509536.176 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T06:52:16.177Z,1443509536.177 [LoopControl] Loaded
2015-09-29T06:52:16.177Z,1443509536.177 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T06:52:16.178Z,1443509536.178 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T06:52:16.178Z,1443509536.178 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T06:52:16.349Z,1443509536.349 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T06:52:16.361Z,1443509536.361 [SBIT] Loaded
2015-09-29T06:52:16.362Z,1443509536.362 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T06:52:16.362Z,1443509536.362 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T06:52:16.397Z,1443509536.397 [IBIT] Loaded
2015-09-29T06:52:16.397Z,1443509536.397 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T06:52:16.399Z,1443509536.399 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T06:52:16.553Z,1443509536.553 [CBIT] Loaded
2015-09-29T06:52:16.554Z,1443509536.554 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T06:52:16.554Z,1443509536.554 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T06:52:16.555Z,1443509536.555 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T06:52:16.594Z,1443509536.594 [DepthRateCalculator] Loaded
2015-09-29T06:52:16.595Z,1443509536.595 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T06:52:16.605Z,1443509536.605 [PitchRateCalculator] Loaded
2015-09-29T06:52:16.605Z,1443509536.605 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T06:52:16.617Z,1443509536.617 [SpeedCalculator] Loaded
2015-09-29T06:52:16.617Z,1443509536.617 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T06:52:16.634Z,1443509536.634 [TempGradientCalculator] Loaded
2015-09-29T06:52:16.635Z,1443509536.635 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T06:52:16.656Z,1443509536.656 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T06:52:16.657Z,1443509536.657 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T06:52:16.662Z,1443509536.662 [YawRateCalculator] Loaded
2015-09-29T06:52:16.663Z,1443509536.663 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T06:52:16.663Z,1443509536.663 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T06:52:16.668Z,1443509536.668 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T06:52:16.795Z,1443509536.795 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T06:52:16.795Z,1443509536.795 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T06:52:16.795Z,1443509536.795 [StratificationFrontDetector] Loaded
2015-09-29T06:52:16.795Z,1443509536.795 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T06:52:16.796Z,1443509536.796 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T06:52:16.797Z,1443509536.797 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T06:52:17.099Z,1443509537.099 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T06:52:17.100Z,1443509537.100 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T06:52:17.236Z,1443509537.236 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T06:52:17.236Z,1443509537.236 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T06:52:17.298Z,1443509537.298 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T06:52:17.298Z,1443509537.298 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T06:52:17.321Z,1443509537.321 [NavChart] Loaded
2015-09-29T06:52:17.321Z,1443509537.321 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T06:52:17.326Z,1443509537.326 [UniversalFixResidualReporter] Loaded
2015-09-29T06:52:17.327Z,1443509537.327 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T06:52:17.327Z,1443509537.327 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T06:52:17.328Z,1443509537.328 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T06:52:17.336Z,1443509537.336 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T06:52:17.337Z,1443509537.337 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T06:52:17.635Z,1443509537.635 [CTD_NeilBrown] Loaded
2015-09-29T06:52:17.635Z,1443509537.635 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T06:52:17.643Z,1443509537.643 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T06:52:17.644Z,1443509537.644 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T06:52:17.657Z,1443509537.657 [ISUS] Loaded
2015-09-29T06:52:17.657Z,1443509537.657 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T06:52:17.676Z,1443509537.676 [PAR_Licor] Loaded
2015-09-29T06:52:17.677Z,1443509537.677 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T06:52:17.734Z,1443509537.734 [WetLabsBB2FL] Loaded
2015-09-29T06:52:17.734Z,1443509537.734 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T06:52:17.735Z,1443509537.735 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T06:52:17.736Z,1443509537.736 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T06:52:17.736Z,1443509537.736 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T06:52:17.737Z,1443509537.737 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T06:52:18.486Z,1443509538.486 [AHRS_sp3003D] Loaded
2015-09-29T06:52:18.487Z,1443509538.487 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T06:52:18.685Z,1443509538.685 [DataOverHttps] Loaded
2015-09-29T06:52:18.685Z,1443509538.685 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T06:52:18.699Z,1443509538.699 [Depth_Keller] Loaded
2015-09-29T06:52:18.699Z,1443509538.699 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T06:52:18.705Z,1443509538.705 [DropWeight] Loaded
2015-09-29T06:52:18.705Z,1443509538.705 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T06:52:18.865Z,1443509538.865 [DVL_micro] Loaded
2015-09-29T06:52:18.866Z,1443509538.866 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T06:52:18.977Z,1443509538.977 [NAL9602] Loaded
2015-09-29T06:52:18.977Z,1443509538.977 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T06:52:19.025Z,1443509539.025 [Onboard] Loaded
2015-09-29T06:52:19.026Z,1443509539.026 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T06:52:19.038Z,1443509539.038 [Radio_Surface] Loaded
2015-09-29T06:52:19.038Z,1443509539.038 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T06:52:19.039Z,1443509539.039 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T06:52:19.040Z,1443509539.040 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T06:52:19.203Z,1443509539.203 [DAT] Loaded
2015-09-29T06:52:19.204Z,1443509539.204 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T06:52:19.210Z,1443509539.210 [SCPI] Loaded
2015-09-29T06:52:19.211Z,1443509539.211 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T06:52:19.211Z,1443509539.211 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T06:52:19.212Z,1443509539.212 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T06:52:19.350Z,1443509539.350 [BuoyancyServo] Loaded
2015-09-29T06:52:19.350Z,1443509539.350 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T06:52:19.364Z,1443509539.364 [ElevatorServo] Loaded
2015-09-29T06:52:19.364Z,1443509539.364 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T06:52:19.380Z,1443509539.380 [MassServo] Loaded
2015-09-29T06:52:19.380Z,1443509539.380 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T06:52:19.392Z,1443509539.392 [RudderServo] Loaded
2015-09-29T06:52:19.393Z,1443509539.393 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T06:52:19.404Z,1443509539.404 [ThrusterServo] Loaded
2015-09-29T06:52:19.404Z,1443509539.404 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T06:52:19.405Z,1443509539.405 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T06:52:19.406Z,1443509539.406 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T06:52:19.613Z,1443509539.613 [InternalSim] Loaded
2015-09-29T06:52:19.613Z,1443509539.613 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T06:52:19.614Z,1443509539.614 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T06:52:19.614Z,1443509539.614 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T06:52:19.654Z,1443509539.654 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T06:52:19.663Z,1443509539.663 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T06:52:19.663Z,1443509539.663 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T06:52:19.670Z,1443509539.670 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T06:52:19.671Z,1443509539.671 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T06:52:19.672Z,1443509539.672 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T06:52:19.677Z,1443509539.677 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T06:52:19.677Z,1443509539.677 [Supervisor](DEBUG): Running supervisor.
2015-09-29T06:52:19.677Z,1443509539.677 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T06:52:19.684Z,1443509539.684 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T06:52:19.684Z,1443509539.684 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T06:52:19.685Z,1443509539.685 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T06:52:19.687Z,1443509539.687 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T06:52:19.688Z,1443509539.688 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T06:52:19.688Z,1443509539.688 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T06:52:19.689Z,1443509539.689 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T06:52:19.689Z,1443509539.689 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T06:52:19.691Z,1443509539.691 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T06:52:19.691Z,1443509539.691 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T06:52:19.692Z,1443509539.692 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T06:52:19.693Z,1443509539.693 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T06:52:19.693Z,1443509539.693 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T06:52:19.694Z,1443509539.694 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T06:52:19.694Z,1443509539.694 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T06:52:19.694Z,1443509539.694 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T06:52:19.694Z,1443509539.694 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T06:52:19.695Z,1443509539.695 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T06:52:19.695Z,1443509539.695 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T06:52:19.696Z,1443509539.696 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T06:52:19.696Z,1443509539.696 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T06:52:19.697Z,1443509539.697 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T06:52:19.698Z,1443509539.698 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T06:52:19.698Z,1443509539.698 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T06:52:19.698Z,1443509539.698 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T06:52:19.699Z,1443509539.699 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T06:52:19.699Z,1443509539.699 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T06:52:19.700Z,1443509539.700 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T06:52:19.700Z,1443509539.700 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T06:52:19.705Z,1443509539.705 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T06:52:19.740Z,1443509539.740 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T06:52:19.840Z,1443509539.840 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T06:52:19.841Z,1443509539.841 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T06:52:19.908Z,1443509539.908 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T06:52:19.932Z,1443509539.932 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T06:52:19.940Z,1443509539.940 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T06:52:19.942Z,1443509539.942 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T06:52:19.942Z,1443509539.942 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T06:52:19.942Z,1443509539.942 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T06:52:19.943Z,1443509539.943 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T06:52:19.943Z,1443509539.943 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T06:52:19.943Z,1443509539.943 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T06:52:19.949Z,1443509539.949 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T06:52:19.949Z,1443509539.949 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T06:52:19.960Z,1443509539.960 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T06:52:19.985Z,1443509539.985 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T06:52:20.026Z,1443509540.026 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T06:52:20.027Z,1443509540.027 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T06:52:20.108Z,1443509540.108 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T06:52:20.109Z,1443509540.109 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T06:52:20.127Z,1443509540.127 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T06:52:20.154Z,1443509540.154 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T06:52:20.164Z,1443509540.164 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T06:52:20.167Z,1443509540.167 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T06:52:20.193Z,1443509540.193 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T06:52:20.411Z,1443509540.411 [DVL_micro](INFO): Initializing
2015-09-29T06:52:20.581Z,1443509540.581 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T06:52:20.608Z,1443509540.608 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T06:52:20.720Z,1443509540.720 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T06:52:20.726Z,1443509540.726 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T06:52:20.752Z,1443509540.752 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T06:52:20.772Z,1443509540.772 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T06:52:20.781Z,1443509540.781 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T06:52:21.037Z,1443509541.037 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T06:52:21.038Z,1443509541.038 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T06:52:30.143Z,1443509550.143 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:30.499Z,1443509550.499 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:30.627Z,1443509550.627 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:31.026Z,1443509551.026 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T06:52:31.030Z,1443509551.030 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:31.425Z,1443509551.425 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:31.826Z,1443509551.826 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:32.225Z,1443509552.225 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:32.626Z,1443509552.626 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:33.024Z,1443509553.024 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:33.424Z,1443509553.424 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:33.824Z,1443509553.824 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:34.225Z,1443509554.225 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:34.625Z,1443509554.625 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:35.025Z,1443509555.025 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:35.425Z,1443509555.425 [NAL9602](INFO): No messages in MT queue
2015-09-29T06:52:35.425Z,1443509555.425 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:35.825Z,1443509555.825 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:36.225Z,1443509556.225 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:36.634Z,1443509556.634 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:37.025Z,1443509557.025 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:37.424Z,1443509557.424 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:37.824Z,1443509557.824 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:38.224Z,1443509558.224 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:38.625Z,1443509558.625 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:39.024Z,1443509559.024 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:39.425Z,1443509559.425 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:39.824Z,1443509559.824 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:40.224Z,1443509560.224 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:40.251Z,1443509560.251 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T06:52:40.625Z,1443509560.625 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:41.024Z,1443509561.024 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:41.424Z,1443509561.424 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:41.825Z,1443509561.825 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:42.224Z,1443509562.224 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:42.625Z,1443509562.625 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:43.024Z,1443509563.024 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:43.424Z,1443509563.424 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:43.825Z,1443509563.825 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:44.224Z,1443509564.224 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:52:44.625Z,1443509564.625 [D