2015-09-29T06:44:18.958Z,1443509058.958 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T06:44:18.961Z,1443509058.961 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T06:44:18.962Z,1443509058.962 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T06:44:18.962Z,1443509058.962 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T06:44:18.965Z,1443509058.965 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T06:44:18.966Z,1443509058.966 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T06:44:18.968Z,1443509058.968 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T06:44:18.981Z,1443509058.981 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T06:44:18.985Z,1443509058.985 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T06:44:18.986Z,1443509058.986 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T06:44:18.986Z,1443509058.986 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T06:44:18.989Z,1443509058.989 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T06:44:18.990Z,1443509058.990 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T06:44:18.992Z,1443509058.992 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T06:44:18.992Z,1443509058.992 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T06:44:18.996Z,1443509058.996 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T06:44:19.392Z,1443509059.392 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T06:44:19.394Z,1443509059.394 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T06:44:19.586Z,1443509059.586 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T06:44:19.588Z,1443509059.588 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T06:44:19.734Z,1443509059.734 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T06:44:19.735Z,1443509059.735 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T06:44:19.885Z,1443509059.885 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T06:44:19.885Z,1443509059.885 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T06:44:19.981Z,1443509059.981 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T06:44:20.202Z,1443509060.202 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T06:44:20.203Z,1443509060.203 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T06:44:20.298Z,1443509060.298 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T06:44:20.298Z,1443509060.298 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T06:44:20.610Z,1443509060.610 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T06:44:20.611Z,1443509060.611 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T06:44:21.010Z,1443509061.010 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T06:44:21.011Z,1443509061.011 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T06:44:21.362Z,1443509061.362 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T06:44:21.364Z,1443509061.364 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T06:44:21.967Z,1443509061.967 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T06:44:21.967Z,1443509061.967 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T06:44:22.198Z,1443509062.198 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T06:44:22.199Z,1443509062.199 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T06:44:22.310Z,1443509062.310 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T06:44:22.311Z,1443509062.311 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T06:44:22.830Z,1443509062.830 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T06:44:22.831Z,1443509062.831 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T06:44:23.009Z,1443509063.009 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T06:44:23.011Z,1443509063.011 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T06:44:23.011Z,1443509063.011 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T06:44:23.015Z,1443509063.015 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T06:44:23.090Z,1443509063.090 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T06:44:23.224Z,1443509063.224 [VerticalControl] Loaded
2015-09-29T06:44:23.224Z,1443509063.224 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T06:44:23.225Z,1443509063.225 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T06:44:23.306Z,1443509063.306 [HorizontalControl] Loaded
2015-09-29T06:44:23.306Z,1443509063.306 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T06:44:23.307Z,1443509063.307 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T06:44:23.313Z,1443509063.313 [SpeedControl] Loaded
2015-09-29T06:44:23.313Z,1443509063.313 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T06:44:23.314Z,1443509063.314 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T06:44:23.314Z,1443509063.314 [LoopControl] Loaded
2015-09-29T06:44:23.315Z,1443509063.315 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T06:44:23.315Z,1443509063.315 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T06:44:23.316Z,1443509063.316 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T06:44:23.474Z,1443509063.474 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T06:44:23.486Z,1443509063.486 [SBIT] Loaded
2015-09-29T06:44:23.487Z,1443509063.487 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T06:44:23.487Z,1443509063.487 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T06:44:23.521Z,1443509063.521 [IBIT] Loaded
2015-09-29T06:44:23.522Z,1443509063.522 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T06:44:23.524Z,1443509063.524 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T06:44:23.679Z,1443509063.679 [CBIT] Loaded
2015-09-29T06:44:23.679Z,1443509063.679 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T06:44:23.680Z,1443509063.680 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T06:44:23.680Z,1443509063.680 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T06:44:23.718Z,1443509063.718 [DepthRateCalculator] Loaded
2015-09-29T06:44:23.718Z,1443509063.718 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T06:44:23.727Z,1443509063.727 [PitchRateCalculator] Loaded
2015-09-29T06:44:23.728Z,1443509063.728 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T06:44:23.739Z,1443509063.739 [SpeedCalculator] Loaded
2015-09-29T06:44:23.739Z,1443509063.739 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T06:44:23.757Z,1443509063.757 [TempGradientCalculator] Loaded
2015-09-29T06:44:23.757Z,1443509063.757 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T06:44:23.779Z,1443509063.779 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T06:44:23.779Z,1443509063.779 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T06:44:23.784Z,1443509063.784 [YawRateCalculator] Loaded
2015-09-29T06:44:23.785Z,1443509063.785 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T06:44:23.785Z,1443509063.785 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T06:44:23.786Z,1443509063.786 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T06:44:23.908Z,1443509063.908 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T06:44:23.908Z,1443509063.908 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T06:44:23.908Z,1443509063.908 [StratificationFrontDetector] Loaded
2015-09-29T06:44:23.909Z,1443509063.909 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T06:44:23.913Z,1443509063.913 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T06:44:23.914Z,1443509063.914 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T06:44:24.205Z,1443509064.205 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T06:44:24.206Z,1443509064.206 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T06:44:24.339Z,1443509064.339 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T06:44:24.339Z,1443509064.339 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T06:44:24.399Z,1443509064.399 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T06:44:24.400Z,1443509064.400 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T06:44:24.422Z,1443509064.422 [NavChart] Loaded
2015-09-29T06:44:24.422Z,1443509064.422 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T06:44:24.427Z,1443509064.427 [UniversalFixResidualReporter] Loaded
2015-09-29T06:44:24.428Z,1443509064.428 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T06:44:24.428Z,1443509064.428 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T06:44:24.429Z,1443509064.429 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T06:44:24.439Z,1443509064.439 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T06:44:24.440Z,1443509064.440 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T06:44:24.739Z,1443509064.739 [CTD_NeilBrown] Loaded
2015-09-29T06:44:24.739Z,1443509064.739 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T06:44:24.741Z,1443509064.741 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T06:44:24.742Z,1443509064.742 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T06:44:24.755Z,1443509064.755 [ISUS] Loaded
2015-09-29T06:44:24.755Z,1443509064.755 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T06:44:24.770Z,1443509064.770 [PAR_Licor] Loaded
2015-09-29T06:44:24.770Z,1443509064.770 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T06:44:24.830Z,1443509064.830 [WetLabsBB2FL] Loaded
2015-09-29T06:44:24.830Z,1443509064.830 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T06:44:24.833Z,1443509064.833 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T06:44:24.834Z,1443509064.834 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T06:44:24.834Z,1443509064.834 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T06:44:24.835Z,1443509064.835 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T06:44:25.569Z,1443509065.569 [AHRS_sp3003D] Loaded
2015-09-29T06:44:25.569Z,1443509065.569 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T06:44:25.765Z,1443509065.765 [DataOverHttps] Loaded
2015-09-29T06:44:25.765Z,1443509065.765 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T06:44:25.779Z,1443509065.779 [Depth_Keller] Loaded
2015-09-29T06:44:25.779Z,1443509065.779 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T06:44:25.784Z,1443509065.784 [DropWeight] Loaded
2015-09-29T06:44:25.784Z,1443509065.784 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T06:44:25.941Z,1443509065.941 [DVL_micro] Loaded
2015-09-29T06:44:25.941Z,1443509065.941 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T06:44:26.050Z,1443509066.050 [NAL9602] Loaded
2015-09-29T06:44:26.050Z,1443509066.050 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T06:44:26.097Z,1443509066.097 [Onboard] Loaded
2015-09-29T06:44:26.097Z,1443509066.097 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T06:44:26.109Z,1443509066.109 [Radio_Surface] Loaded
2015-09-29T06:44:26.109Z,1443509066.109 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T06:44:26.113Z,1443509066.113 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T06:44:26.114Z,1443509066.114 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T06:44:26.269Z,1443509066.269 [DAT] Loaded
2015-09-29T06:44:26.270Z,1443509066.270 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T06:44:26.276Z,1443509066.276 [SCPI] Loaded
2015-09-29T06:44:26.277Z,1443509066.277 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T06:44:26.277Z,1443509066.277 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T06:44:26.278Z,1443509066.278 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T06:44:26.414Z,1443509066.414 [BuoyancyServo] Loaded
2015-09-29T06:44:26.415Z,1443509066.415 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T06:44:26.427Z,1443509066.427 [ElevatorServo] Loaded
2015-09-29T06:44:26.428Z,1443509066.428 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T06:44:26.440Z,1443509066.440 [MassServo] Loaded
2015-09-29T06:44:26.440Z,1443509066.440 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T06:44:26.452Z,1443509066.452 [RudderServo] Loaded
2015-09-29T06:44:26.452Z,1443509066.452 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T06:44:26.468Z,1443509066.468 [ThrusterServo] Loaded
2015-09-29T06:44:26.468Z,1443509066.468 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T06:44:26.468Z,1443509066.468 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T06:44:26.469Z,1443509066.469 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T06:44:26.666Z,1443509066.666 [InternalSim] Loaded
2015-09-29T06:44:26.666Z,1443509066.666 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T06:44:26.666Z,1443509066.666 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T06:44:26.667Z,1443509066.667 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T06:44:26.710Z,1443509066.710 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T06:44:26.714Z,1443509066.714 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T06:44:26.715Z,1443509066.715 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T06:44:26.722Z,1443509066.722 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T06:44:26.725Z,1443509066.725 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T06:44:26.726Z,1443509066.726 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T06:44:26.730Z,1443509066.730 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T06:44:26.731Z,1443509066.731 [Supervisor](DEBUG): Running supervisor.
2015-09-29T06:44:26.731Z,1443509066.731 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T06:44:26.738Z,1443509066.738 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T06:44:26.738Z,1443509066.738 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T06:44:26.739Z,1443509066.739 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T06:44:26.741Z,1443509066.741 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T06:44:26.742Z,1443509066.742 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T06:44:26.742Z,1443509066.742 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T06:44:26.743Z,1443509066.743 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T06:44:26.743Z,1443509066.743 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T06:44:26.744Z,1443509066.744 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T06:44:26.745Z,1443509066.745 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T06:44:26.746Z,1443509066.746 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T06:44:26.746Z,1443509066.746 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T06:44:26.747Z,1443509066.747 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T06:44:26.747Z,1443509066.747 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T06:44:26.747Z,1443509066.747 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T06:44:26.748Z,1443509066.748 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T06:44:26.748Z,1443509066.748 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T06:44:26.748Z,1443509066.748 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T06:44:26.749Z,1443509066.749 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T06:44:26.749Z,1443509066.749 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T06:44:26.750Z,1443509066.750 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T06:44:26.750Z,1443509066.750 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T06:44:26.751Z,1443509066.751 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T06:44:26.752Z,1443509066.752 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T06:44:26.752Z,1443509066.752 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T06:44:26.752Z,1443509066.752 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T06:44:26.753Z,1443509066.753 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T06:44:26.753Z,1443509066.753 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T06:44:26.754Z,1443509066.754 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T06:44:26.759Z,1443509066.759 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T06:44:26.782Z,1443509066.782 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T06:44:26.814Z,1443509066.814 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T06:44:26.918Z,1443509066.918 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T06:44:26.925Z,1443509066.925 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T06:44:26.936Z,1443509066.936 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T06:44:26.944Z,1443509066.944 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T06:44:26.958Z,1443509066.958 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T06:44:27.008Z,1443509067.008 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T06:44:27.030Z,1443509067.030 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T06:44:27.030Z,1443509067.030 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T06:44:27.030Z,1443509067.030 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T06:44:27.030Z,1443509067.030 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T06:44:27.031Z,1443509067.031 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T06:44:27.031Z,1443509067.031 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T06:44:27.031Z,1443509067.031 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T06:44:27.031Z,1443509067.031 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T06:44:27.039Z,1443509067.039 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T06:44:27.040Z,1443509067.040 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T06:44:27.111Z,1443509067.111 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T06:44:27.112Z,1443509067.112 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T06:44:27.154Z,1443509067.154 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T06:44:27.157Z,1443509067.157 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T06:44:27.179Z,1443509067.179 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T06:44:27.200Z,1443509067.200 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T06:44:27.206Z,1443509067.206 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T06:44:27.409Z,1443509067.409 [DVL_micro](INFO): Initializing
2015-09-29T06:44:27.578Z,1443509067.578 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T06:44:27.587Z,1443509067.587 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T06:44:27.702Z,1443509067.702 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T06:44:27.718Z,1443509067.718 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T06:44:27.733Z,1443509067.733 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T06:44:27.742Z,1443509067.742 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T06:44:27.754Z,1443509067.754 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T06:44:28.033Z,1443509068.033 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T06:44:28.035Z,1443509068.035 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T06:44:37.070Z,1443509077.070 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:37.404Z,1443509077.404 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:37.537Z,1443509077.537 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:37.936Z,1443509077.936 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T06:44:37.940Z,1443509077.940 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:38.334Z,1443509078.334 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:38.734Z,1443509078.734 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:39.135Z,1443509079.135 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:39.535Z,1443509079.535 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:39.935Z,1443509079.935 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:40.334Z,1443509080.334 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:40.733Z,1443509080.733 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:41.134Z,1443509081.134 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:41.535Z,1443509081.535 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:41.934Z,1443509081.934 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:42.335Z,1443509082.335 [NAL9602](INFO): No messages in MT queue
2015-09-29T06:44:42.336Z,1443509082.336 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:42.734Z,1443509082.734 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:43.152Z,1443509083.152 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:43.534Z,1443509083.534 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:43.934Z,1443509083.934 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:44.334Z,1443509084.334 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:44.735Z,1443509084.735 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:45.133Z,1443509085.133 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:45.533Z,1443509085.533 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:45.934Z,1443509085.934 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:46.334Z,1443509086.334 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:46.733Z,1443509086.733 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:47.134Z,1443509087.134 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:47.148Z,1443509087.148 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T06:44:47.534Z,1443509087.534 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:47.935Z,1443509087.935 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:48.339Z,1443509088.339 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:48.739Z,1443509088.739 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:49.136Z,1443509089.136 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:49.539Z,1443509089.539 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:49.940Z,1443509089.940 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:50.340Z,1443509090.340 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:50.739Z,1443509090.739 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:51.136Z,1443509091.136 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:44:51.536Z,1443509091.536 [D