2015-09-29T06:20:38.231Z,1443507638.231 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T06:20:38.233Z,1443507638.233 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T06:20:38.234Z,1443507638.234 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T06:20:38.234Z,1443507638.234 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T06:20:38.237Z,1443507638.237 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T06:20:38.238Z,1443507638.238 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T06:20:38.241Z,1443507638.241 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T06:20:38.253Z,1443507638.253 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T06:20:38.257Z,1443507638.257 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T06:20:38.258Z,1443507638.258 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T06:20:38.259Z,1443507638.259 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T06:20:38.261Z,1443507638.261 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T06:20:38.262Z,1443507638.262 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T06:20:38.264Z,1443507638.264 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T06:20:38.264Z,1443507638.264 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T06:20:38.268Z,1443507638.268 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T06:20:38.666Z,1443507638.666 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T06:20:38.668Z,1443507638.668 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T06:20:38.862Z,1443507638.862 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T06:20:38.863Z,1443507638.863 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T06:20:39.010Z,1443507639.010 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T06:20:39.011Z,1443507639.011 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T06:20:39.158Z,1443507639.158 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T06:20:39.159Z,1443507639.159 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T06:20:39.253Z,1443507639.253 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T06:20:39.474Z,1443507639.474 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T06:20:39.475Z,1443507639.475 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T06:20:39.570Z,1443507639.570 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T06:20:39.571Z,1443507639.571 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T06:20:39.885Z,1443507639.885 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T06:20:39.885Z,1443507639.885 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T06:20:40.285Z,1443507640.285 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T06:20:40.286Z,1443507640.286 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T06:20:40.638Z,1443507640.638 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T06:20:40.640Z,1443507640.640 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T06:20:41.241Z,1443507641.241 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T06:20:41.242Z,1443507641.242 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T06:20:41.474Z,1443507641.474 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T06:20:41.475Z,1443507641.475 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T06:20:41.586Z,1443507641.586 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T06:20:41.587Z,1443507641.587 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T06:20:42.110Z,1443507642.110 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T06:20:42.110Z,1443507642.110 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T06:20:42.233Z,1443507642.233 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T06:20:42.235Z,1443507642.235 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T06:20:42.235Z,1443507642.235 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T06:20:42.240Z,1443507642.240 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T06:20:42.314Z,1443507642.314 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T06:20:42.450Z,1443507642.450 [VerticalControl] Loaded
2015-09-29T06:20:42.450Z,1443507642.450 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T06:20:42.451Z,1443507642.451 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T06:20:42.533Z,1443507642.533 [HorizontalControl] Loaded
2015-09-29T06:20:42.533Z,1443507642.533 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T06:20:42.534Z,1443507642.534 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T06:20:42.540Z,1443507642.540 [SpeedControl] Loaded
2015-09-29T06:20:42.540Z,1443507642.540 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T06:20:42.541Z,1443507642.541 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T06:20:42.545Z,1443507642.545 [LoopControl] Loaded
2015-09-29T06:20:42.546Z,1443507642.546 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T06:20:42.546Z,1443507642.546 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T06:20:42.547Z,1443507642.547 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T06:20:42.707Z,1443507642.707 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T06:20:42.719Z,1443507642.719 [SBIT] Loaded
2015-09-29T06:20:42.720Z,1443507642.720 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T06:20:42.721Z,1443507642.721 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T06:20:42.755Z,1443507642.755 [IBIT] Loaded
2015-09-29T06:20:42.755Z,1443507642.755 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T06:20:42.758Z,1443507642.758 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T06:20:42.918Z,1443507642.918 [CBIT] Loaded
2015-09-29T06:20:42.919Z,1443507642.919 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T06:20:42.919Z,1443507642.919 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T06:20:42.920Z,1443507642.920 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T06:20:42.961Z,1443507642.961 [DepthRateCalculator] Loaded
2015-09-29T06:20:42.961Z,1443507642.961 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T06:20:42.967Z,1443507642.967 [PitchRateCalculator] Loaded
2015-09-29T06:20:42.967Z,1443507642.967 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T06:20:42.983Z,1443507642.983 [SpeedCalculator] Loaded
2015-09-29T06:20:42.983Z,1443507642.983 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T06:20:43.001Z,1443507643.001 [TempGradientCalculator] Loaded
2015-09-29T06:20:43.001Z,1443507643.001 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T06:20:43.023Z,1443507643.023 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T06:20:43.023Z,1443507643.023 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T06:20:43.028Z,1443507643.028 [YawRateCalculator] Loaded
2015-09-29T06:20:43.029Z,1443507643.029 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T06:20:43.029Z,1443507643.029 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T06:20:43.030Z,1443507643.030 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T06:20:43.153Z,1443507643.153 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T06:20:43.153Z,1443507643.153 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T06:20:43.153Z,1443507643.153 [StratificationFrontDetector] Loaded
2015-09-29T06:20:43.154Z,1443507643.154 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T06:20:43.154Z,1443507643.154 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T06:20:43.155Z,1443507643.155 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T06:20:43.447Z,1443507643.447 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T06:20:43.448Z,1443507643.448 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T06:20:43.582Z,1443507643.582 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T06:20:43.582Z,1443507643.582 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T06:20:43.643Z,1443507643.643 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T06:20:43.644Z,1443507643.644 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T06:20:43.666Z,1443507643.666 [NavChart] Loaded
2015-09-29T06:20:43.666Z,1443507643.666 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T06:20:43.671Z,1443507643.671 [UniversalFixResidualReporter] Loaded
2015-09-29T06:20:43.671Z,1443507643.671 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T06:20:43.672Z,1443507643.672 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T06:20:43.673Z,1443507643.673 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T06:20:43.681Z,1443507643.681 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T06:20:43.682Z,1443507643.682 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T06:20:43.984Z,1443507643.984 [CTD_NeilBrown] Loaded
2015-09-29T06:20:43.984Z,1443507643.984 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T06:20:43.985Z,1443507643.985 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T06:20:43.986Z,1443507643.986 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T06:20:43.999Z,1443507643.999 [ISUS] Loaded
2015-09-29T06:20:43.999Z,1443507643.999 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T06:20:44.014Z,1443507644.014 [PAR_Licor] Loaded
2015-09-29T06:20:44.014Z,1443507644.014 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T06:20:44.075Z,1443507644.075 [WetLabsBB2FL] Loaded
2015-09-29T06:20:44.075Z,1443507644.075 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T06:20:44.077Z,1443507644.077 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T06:20:44.078Z,1443507644.078 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T06:20:44.078Z,1443507644.078 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T06:20:44.079Z,1443507644.079 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T06:20:44.811Z,1443507644.811 [AHRS_sp3003D] Loaded
2015-09-29T06:20:44.811Z,1443507644.811 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T06:20:45.005Z,1443507645.005 [DataOverHttps] Loaded
2015-09-29T06:20:45.005Z,1443507645.005 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T06:20:45.023Z,1443507645.023 [Depth_Keller] Loaded
2015-09-29T06:20:45.024Z,1443507645.024 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T06:20:45.029Z,1443507645.029 [DropWeight] Loaded
2015-09-29T06:20:45.029Z,1443507645.029 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T06:20:45.182Z,1443507645.182 [DVL_micro] Loaded
2015-09-29T06:20:45.182Z,1443507645.182 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T06:20:45.291Z,1443507645.291 [NAL9602] Loaded
2015-09-29T06:20:45.292Z,1443507645.292 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T06:20:45.339Z,1443507645.339 [Onboard] Loaded
2015-09-29T06:20:45.340Z,1443507645.340 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T06:20:45.355Z,1443507645.355 [Radio_Surface] Loaded
2015-09-29T06:20:45.356Z,1443507645.356 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T06:20:45.357Z,1443507645.357 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T06:20:45.358Z,1443507645.358 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T06:20:45.518Z,1443507645.518 [DAT] Loaded
2015-09-29T06:20:45.519Z,1443507645.519 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T06:20:45.525Z,1443507645.525 [SCPI] Loaded
2015-09-29T06:20:45.526Z,1443507645.526 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T06:20:45.526Z,1443507645.526 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T06:20:45.527Z,1443507645.527 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T06:20:45.663Z,1443507645.663 [BuoyancyServo] Loaded
2015-09-29T06:20:45.663Z,1443507645.663 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T06:20:45.676Z,1443507645.676 [ElevatorServo] Loaded
2015-09-29T06:20:45.676Z,1443507645.676 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T06:20:45.688Z,1443507645.688 [MassServo] Loaded
2015-09-29T06:20:45.689Z,1443507645.689 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T06:20:45.700Z,1443507645.700 [RudderServo] Loaded
2015-09-29T06:20:45.701Z,1443507645.701 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T06:20:45.717Z,1443507645.717 [ThrusterServo] Loaded
2015-09-29T06:20:45.717Z,1443507645.717 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T06:20:45.718Z,1443507645.718 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T06:20:45.718Z,1443507645.718 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T06:20:45.918Z,1443507645.918 [InternalSim] Loaded
2015-09-29T06:20:45.919Z,1443507645.919 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T06:20:45.919Z,1443507645.919 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T06:20:45.920Z,1443507645.920 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T06:20:45.963Z,1443507645.963 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T06:20:45.968Z,1443507645.968 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T06:20:45.968Z,1443507645.968 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T06:20:45.975Z,1443507645.975 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T06:20:45.977Z,1443507645.977 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T06:20:45.978Z,1443507645.978 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T06:20:45.983Z,1443507645.983 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T06:20:45.983Z,1443507645.983 [Supervisor](DEBUG): Running supervisor.
2015-09-29T06:20:45.983Z,1443507645.983 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T06:20:45.990Z,1443507645.990 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T06:20:45.990Z,1443507645.990 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T06:20:45.991Z,1443507645.991 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T06:20:45.993Z,1443507645.993 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T06:20:45.994Z,1443507645.994 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T06:20:45.994Z,1443507645.994 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T06:20:45.995Z,1443507645.995 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T06:20:45.995Z,1443507645.995 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T06:20:45.997Z,1443507645.997 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T06:20:45.997Z,1443507645.997 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T06:20:45.998Z,1443507645.998 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T06:20:45.998Z,1443507645.998 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T06:20:45.999Z,1443507645.999 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T06:20:45.000Z,1443507646.000 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T06:20:45.000Z,1443507646.000 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T06:20:46.000Z,1443507646.000 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T06:20:46.000Z,1443507646.000 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T06:20:46.001Z,1443507646.001 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T06:20:46.001Z,1443507646.001 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T06:20:46.002Z,1443507646.002 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T06:20:46.002Z,1443507646.002 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T06:20:46.003Z,1443507646.003 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T06:20:46.003Z,1443507646.003 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T06:20:46.004Z,1443507646.004 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T06:20:46.004Z,1443507646.004 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T06:20:46.005Z,1443507646.005 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T06:20:46.005Z,1443507646.005 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T06:20:46.005Z,1443507646.005 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T06:20:46.006Z,1443507646.006 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T06:20:46.011Z,1443507646.011 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T06:20:46.046Z,1443507646.046 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T06:20:46.142Z,1443507646.142 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T06:20:46.143Z,1443507646.143 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T06:20:46.217Z,1443507646.217 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T06:20:46.240Z,1443507646.240 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T06:20:46.250Z,1443507646.250 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T06:20:46.268Z,1443507646.268 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T06:20:46.270Z,1443507646.270 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T06:20:46.270Z,1443507646.270 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T06:20:46.271Z,1443507646.271 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T06:20:46.271Z,1443507646.271 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T06:20:46.271Z,1443507646.271 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T06:20:46.271Z,1443507646.271 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T06:20:46.272Z,1443507646.272 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T06:20:46.272Z,1443507646.272 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T06:20:46.312Z,1443507646.312 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T06:20:46.334Z,1443507646.334 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T06:20:46.335Z,1443507646.335 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T06:20:46.410Z,1443507646.410 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T06:20:46.411Z,1443507646.411 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T06:20:46.437Z,1443507646.437 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T06:20:46.440Z,1443507646.440 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T06:20:46.462Z,1443507646.462 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T06:20:46.465Z,1443507646.465 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T06:20:46.487Z,1443507646.487 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T06:20:46.708Z,1443507646.708 [DVL_micro](INFO): Initializing
2015-09-29T06:20:46.880Z,1443507646.880 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T06:20:46.908Z,1443507646.908 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T06:20:47.031Z,1443507647.031 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T06:20:47.045Z,1443507647.045 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T06:20:47.061Z,1443507647.061 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T06:20:47.072Z,1443507647.072 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T06:20:47.086Z,1443507647.086 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T06:20:47.335Z,1443507647.335 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T06:20:47.336Z,1443507647.336 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T06:20:56.485Z,1443507656.485 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:20:56.835Z,1443507656.835 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:20:56.968Z,1443507656.968 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:20:57.369Z,1443507657.369 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T06:20:57.372Z,1443507657.372 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:20:57.767Z,1443507657.767 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:20:58.167Z,1443507658.167 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:20:58.567Z,1443507658.567 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:20:58.968Z,1443507658.968 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:20:59.366Z,1443507659.366 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:20:59.766Z,1443507659.766 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:00.166Z,1443507660.166 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:00.567Z,1443507660.567 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:00.976Z,1443507660.976 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:01.371Z,1443507661.371 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:01.770Z,1443507661.770 [NAL9602](INFO): No messages in MT queue
2015-09-29T06:21:01.771Z,1443507661.771 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:02.171Z,1443507662.171 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:02.571Z,1443507662.571 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:02.972Z,1443507662.972 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:03.369Z,1443507663.369 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:03.776Z,1443507663.776 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:04.172Z,1443507664.172 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:04.572Z,1443507664.572 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:04.974Z,1443507664.974 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:05.366Z,1443507665.366 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:05.770Z,1443507665.770 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:06.166Z,1443507666.166 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:06.567Z,1443507666.567 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:06.581Z,1443507666.581 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T06:21:06.966Z,1443507666.966 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:07.401Z,1443507667.401 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:07.766Z,1443507667.766 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:08.166Z,1443507668.166 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:08.566Z,1443507668.566 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:08.966Z,1443507668.966 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:09.366Z,1443507669.366 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:09.767Z,1443507669.767 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:10.166Z,1443507670.166 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:10.566Z,1443507670.566 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T06:21:10.966Z,1443507670.966 [D