2015-09-29T05:33:11.006Z,1443504791.006 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T05:33:11.012Z,1443504791.012 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T05:33:11.012Z,1443504791.012 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T05:33:11.013Z,1443504791.013 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T05:33:11.016Z,1443504791.016 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T05:33:11.016Z,1443504791.016 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T05:33:11.019Z,1443504791.019 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T05:33:11.031Z,1443504791.031 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T05:33:11.036Z,1443504791.036 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T05:33:11.036Z,1443504791.036 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T05:33:11.037Z,1443504791.037 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T05:33:11.040Z,1443504791.040 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T05:33:11.040Z,1443504791.040 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T05:33:11.042Z,1443504791.042 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T05:33:11.042Z,1443504791.042 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T05:33:11.046Z,1443504791.046 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T05:33:11.449Z,1443504791.449 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T05:33:11.451Z,1443504791.451 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T05:33:11.643Z,1443504791.643 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T05:33:11.645Z,1443504791.645 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T05:33:11.792Z,1443504791.792 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T05:33:11.793Z,1443504791.793 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T05:33:11.944Z,1443504791.944 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T05:33:11.945Z,1443504791.945 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T05:33:12.041Z,1443504792.041 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T05:33:12.264Z,1443504792.264 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T05:33:12.265Z,1443504792.265 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T05:33:12.364Z,1443504792.364 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T05:33:12.365Z,1443504792.365 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T05:33:12.685Z,1443504792.685 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T05:33:12.685Z,1443504792.685 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T05:33:13.089Z,1443504793.089 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T05:33:13.090Z,1443504793.090 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T05:33:13.449Z,1443504793.449 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T05:33:13.451Z,1443504793.451 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T05:33:14.053Z,1443504794.053 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T05:33:14.054Z,1443504794.054 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T05:33:14.291Z,1443504794.291 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T05:33:14.292Z,1443504794.292 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T05:33:14.407Z,1443504794.407 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T05:33:14.407Z,1443504794.407 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T05:33:14.975Z,1443504794.975 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T05:33:14.976Z,1443504794.976 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T05:33:15.099Z,1443504795.099 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T05:33:15.101Z,1443504795.101 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T05:33:15.101Z,1443504795.101 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T05:33:15.106Z,1443504795.106 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T05:33:15.180Z,1443504795.180 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T05:33:15.315Z,1443504795.315 [VerticalControl] Loaded
2015-09-29T05:33:15.315Z,1443504795.315 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T05:33:15.316Z,1443504795.316 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T05:33:15.397Z,1443504795.397 [HorizontalControl] Loaded
2015-09-29T05:33:15.397Z,1443504795.397 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T05:33:15.398Z,1443504795.398 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T05:33:15.408Z,1443504795.408 [SpeedControl] Loaded
2015-09-29T05:33:15.408Z,1443504795.408 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T05:33:15.409Z,1443504795.409 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T05:33:15.410Z,1443504795.410 [LoopControl] Loaded
2015-09-29T05:33:15.410Z,1443504795.410 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T05:33:15.410Z,1443504795.410 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T05:33:15.411Z,1443504795.411 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T05:33:15.572Z,1443504795.572 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T05:33:15.584Z,1443504795.584 [SBIT] Loaded
2015-09-29T05:33:15.584Z,1443504795.584 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T05:33:15.585Z,1443504795.585 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T05:33:15.619Z,1443504795.619 [IBIT] Loaded
2015-09-29T05:33:15.619Z,1443504795.619 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T05:33:15.621Z,1443504795.621 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T05:33:15.777Z,1443504795.777 [CBIT] Loaded
2015-09-29T05:33:15.777Z,1443504795.777 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T05:33:15.778Z,1443504795.778 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T05:33:15.779Z,1443504795.779 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T05:33:15.816Z,1443504795.816 [DepthRateCalculator] Loaded
2015-09-29T05:33:15.816Z,1443504795.816 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T05:33:15.826Z,1443504795.826 [PitchRateCalculator] Loaded
2015-09-29T05:33:15.826Z,1443504795.826 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T05:33:15.838Z,1443504795.838 [SpeedCalculator] Loaded
2015-09-29T05:33:15.838Z,1443504795.838 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T05:33:15.855Z,1443504795.855 [TempGradientCalculator] Loaded
2015-09-29T05:33:15.856Z,1443504795.856 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T05:33:15.877Z,1443504795.877 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T05:33:15.877Z,1443504795.877 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T05:33:15.883Z,1443504795.883 [YawRateCalculator] Loaded
2015-09-29T05:33:15.883Z,1443504795.883 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T05:33:15.883Z,1443504795.883 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T05:33:15.884Z,1443504795.884 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T05:33:16.007Z,1443504796.007 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T05:33:16.007Z,1443504796.007 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T05:33:16.007Z,1443504796.007 [StratificationFrontDetector] Loaded
2015-09-29T05:33:16.007Z,1443504796.007 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T05:33:16.008Z,1443504796.008 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T05:33:16.008Z,1443504796.008 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T05:33:16.302Z,1443504796.302 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T05:33:16.303Z,1443504796.303 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T05:33:16.436Z,1443504796.436 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T05:33:16.436Z,1443504796.436 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T05:33:16.497Z,1443504796.497 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T05:33:16.497Z,1443504796.497 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T05:33:16.515Z,1443504796.515 [NavChart] Loaded
2015-09-29T05:33:16.515Z,1443504796.515 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T05:33:16.525Z,1443504796.525 [UniversalFixResidualReporter] Loaded
2015-09-29T05:33:16.525Z,1443504796.525 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T05:33:16.526Z,1443504796.526 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T05:33:16.526Z,1443504796.526 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T05:33:16.535Z,1443504796.535 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T05:33:16.540Z,1443504796.540 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T05:33:16.841Z,1443504796.841 [CTD_NeilBrown] Loaded
2015-09-29T05:33:16.841Z,1443504796.841 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T05:33:16.844Z,1443504796.844 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T05:33:16.844Z,1443504796.844 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T05:33:16.857Z,1443504796.857 [ISUS] Loaded
2015-09-29T05:33:16.857Z,1443504796.857 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T05:33:16.872Z,1443504796.872 [PAR_Licor] Loaded
2015-09-29T05:33:16.872Z,1443504796.872 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T05:33:16.933Z,1443504796.933 [WetLabsBB2FL] Loaded
2015-09-29T05:33:16.933Z,1443504796.933 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T05:33:16.936Z,1443504796.936 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T05:33:16.936Z,1443504796.936 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T05:33:16.936Z,1443504796.936 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T05:33:16.937Z,1443504796.937 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T05:33:17.665Z,1443504797.665 [AHRS_sp3003D] Loaded
2015-09-29T05:33:17.665Z,1443504797.665 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T05:33:17.859Z,1443504797.859 [DataOverHttps] Loaded
2015-09-29T05:33:17.859Z,1443504797.859 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T05:33:17.873Z,1443504797.873 [Depth_Keller] Loaded
2015-09-29T05:33:17.873Z,1443504797.873 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T05:33:17.878Z,1443504797.878 [DropWeight] Loaded
2015-09-29T05:33:17.879Z,1443504797.879 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T05:33:18.036Z,1443504798.036 [DVL_micro] Loaded
2015-09-29T05:33:18.036Z,1443504798.036 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T05:33:18.141Z,1443504798.141 [NAL9602] Loaded
2015-09-29T05:33:18.141Z,1443504798.141 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T05:33:18.193Z,1443504798.193 [Onboard] Loaded
2015-09-29T05:33:18.193Z,1443504798.193 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T05:33:18.205Z,1443504798.205 [Radio_Surface] Loaded
2015-09-29T05:33:18.205Z,1443504798.205 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T05:33:18.208Z,1443504798.208 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T05:33:18.208Z,1443504798.208 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T05:33:18.368Z,1443504798.368 [DAT] Loaded
2015-09-29T05:33:18.369Z,1443504798.369 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T05:33:18.375Z,1443504798.375 [SCPI] Loaded
2015-09-29T05:33:18.376Z,1443504798.376 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T05:33:18.376Z,1443504798.376 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T05:33:18.377Z,1443504798.377 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T05:33:18.512Z,1443504798.512 [BuoyancyServo] Loaded
2015-09-29T05:33:18.512Z,1443504798.512 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T05:33:18.525Z,1443504798.525 [ElevatorServo] Loaded
2015-09-29T05:33:18.526Z,1443504798.526 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T05:33:18.538Z,1443504798.538 [MassServo] Loaded
2015-09-29T05:33:18.538Z,1443504798.538 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T05:33:18.550Z,1443504798.550 [RudderServo] Loaded
2015-09-29T05:33:18.550Z,1443504798.550 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T05:33:18.566Z,1443504798.566 [ThrusterServo] Loaded
2015-09-29T05:33:18.566Z,1443504798.566 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T05:33:18.566Z,1443504798.566 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T05:33:18.567Z,1443504798.567 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T05:33:18.768Z,1443504798.768 [InternalSim] Loaded
2015-09-29T05:33:18.769Z,1443504798.769 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T05:33:18.769Z,1443504798.769 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T05:33:18.770Z,1443504798.770 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T05:33:18.809Z,1443504798.809 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T05:33:18.817Z,1443504798.817 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T05:33:18.818Z,1443504798.818 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T05:33:18.825Z,1443504798.825 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T05:33:18.828Z,1443504798.828 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T05:33:18.828Z,1443504798.828 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T05:33:18.833Z,1443504798.833 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T05:33:18.833Z,1443504798.833 [Supervisor](DEBUG): Running supervisor.
2015-09-29T05:33:18.834Z,1443504798.834 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T05:33:18.840Z,1443504798.840 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T05:33:18.841Z,1443504798.841 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T05:33:18.841Z,1443504798.841 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T05:33:18.843Z,1443504798.843 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T05:33:18.844Z,1443504798.844 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T05:33:18.845Z,1443504798.845 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T05:33:18.845Z,1443504798.845 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T05:33:18.845Z,1443504798.845 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T05:33:18.847Z,1443504798.847 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T05:33:18.847Z,1443504798.847 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T05:33:18.848Z,1443504798.848 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T05:33:18.849Z,1443504798.849 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T05:33:18.850Z,1443504798.850 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T05:33:18.850Z,1443504798.850 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T05:33:18.850Z,1443504798.850 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T05:33:18.850Z,1443504798.850 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T05:33:18.851Z,1443504798.851 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T05:33:18.851Z,1443504798.851 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T05:33:18.851Z,1443504798.851 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T05:33:18.852Z,1443504798.852 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T05:33:18.852Z,1443504798.852 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T05:33:18.853Z,1443504798.853 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T05:33:18.854Z,1443504798.854 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T05:33:18.854Z,1443504798.854 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T05:33:18.854Z,1443504798.854 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T05:33:18.855Z,1443504798.855 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T05:33:18.855Z,1443504798.855 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T05:33:18.856Z,1443504798.856 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T05:33:18.856Z,1443504798.856 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T05:33:18.861Z,1443504798.861 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T05:33:18.896Z,1443504798.896 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T05:33:18.992Z,1443504798.992 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T05:33:18.993Z,1443504798.993 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T05:33:19.036Z,1443504799.036 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T05:33:19.051Z,1443504799.051 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T05:33:19.072Z,1443504799.072 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T05:33:19.157Z,1443504799.157 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T05:33:19.164Z,1443504799.164 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T05:33:19.164Z,1443504799.164 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T05:33:19.165Z,1443504799.165 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T05:33:19.165Z,1443504799.165 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T05:33:19.165Z,1443504799.165 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T05:33:19.165Z,1443504799.165 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T05:33:19.166Z,1443504799.166 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T05:33:19.166Z,1443504799.166 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T05:33:19.249Z,1443504799.249 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T05:33:19.259Z,1443504799.259 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T05:33:19.284Z,1443504799.284 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T05:33:19.345Z,1443504799.345 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T05:33:19.346Z,1443504799.346 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T05:33:19.372Z,1443504799.372 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T05:33:19.375Z,1443504799.375 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T05:33:19.397Z,1443504799.397 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T05:33:19.424Z,1443504799.424 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T05:33:19.431Z,1443504799.431 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T05:33:19.695Z,1443504799.695 [DVL_micro](INFO): Initializing
2015-09-29T05:33:19.851Z,1443504799.851 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T05:33:19.879Z,1443504799.879 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T05:33:20.008Z,1443504800.008 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T05:33:20.014Z,1443504800.014 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T05:33:20.028Z,1443504800.028 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T05:33:20.036Z,1443504800.036 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T05:33:20.052Z,1443504800.052 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T05:33:20.317Z,1443504800.317 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T05:33:20.319Z,1443504800.319 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T05:33:29.389Z,1443504809.389 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:29.747Z,1443504809.747 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:29.870Z,1443504809.870 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:30.272Z,1443504810.272 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T05:33:30.275Z,1443504810.275 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:30.668Z,1443504810.668 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:31.069Z,1443504811.069 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:31.469Z,1443504811.469 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:31.880Z,1443504811.880 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:32.268Z,1443504812.268 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:32.668Z,1443504812.668 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:33.068Z,1443504813.068 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:33.468Z,1443504813.468 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:33.869Z,1443504813.869 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:34.269Z,1443504814.269 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:34.667Z,1443504814.667 [NAL9602](INFO): No messages in MT queue
2015-09-29T05:33:34.668Z,1443504814.668 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:35.068Z,1443504815.068 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:35.468Z,1443504815.468 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:35.869Z,1443504815.869 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:36.269Z,1443504816.269 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:36.669Z,1443504816.669 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:37.068Z,1443504817.068 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:37.468Z,1443504817.468 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:37.869Z,1443504817.869 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:38.269Z,1443504818.269 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:38.670Z,1443504818.670 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:39.068Z,1443504819.068 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:39.468Z,1443504819.468 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:39.510Z,1443504819.510 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T05:33:39.868Z,1443504819.868 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:40.268Z,1443504820.268 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:40.669Z,1443504820.669 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:41.068Z,1443504821.068 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:41.469Z,1443504821.469 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:41.868Z,1443504821.868 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:42.269Z,1443504822.269 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:42.668Z,1443504822.668 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:43.069Z,1443504823.069 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:43.480Z,1443504823.480 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:33:43.869Z,1443504823.869 [D