2015-09-29T05:01:31.368Z,1443502891.368 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T05:01:31.370Z,1443502891.370 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T05:01:31.371Z,1443502891.371 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T05:01:31.372Z,1443502891.372 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T05:01:31.374Z,1443502891.374 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T05:01:31.375Z,1443502891.375 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T05:01:31.377Z,1443502891.377 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T05:01:31.390Z,1443502891.390 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T05:01:31.394Z,1443502891.394 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T05:01:31.395Z,1443502891.395 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T05:01:31.395Z,1443502891.395 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T05:01:31.398Z,1443502891.398 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T05:01:31.399Z,1443502891.399 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T05:01:31.401Z,1443502891.401 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T05:01:31.401Z,1443502891.401 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T05:01:31.405Z,1443502891.405 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T05:01:31.794Z,1443502891.794 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T05:01:31.796Z,1443502891.796 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T05:01:31.986Z,1443502891.986 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T05:01:31.987Z,1443502891.987 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T05:01:32.131Z,1443502892.131 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T05:01:32.132Z,1443502892.132 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T05:01:32.279Z,1443502892.279 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T05:01:32.280Z,1443502892.280 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T05:01:32.379Z,1443502892.379 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T05:01:32.599Z,1443502892.599 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T05:01:32.600Z,1443502892.600 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T05:01:32.695Z,1443502892.695 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T05:01:32.696Z,1443502892.696 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T05:01:33.010Z,1443502893.010 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T05:01:33.010Z,1443502893.010 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T05:01:33.411Z,1443502893.411 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T05:01:33.412Z,1443502893.412 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T05:01:33.767Z,1443502893.767 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T05:01:33.769Z,1443502893.769 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T05:01:34.372Z,1443502894.372 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T05:01:34.373Z,1443502894.373 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T05:01:34.603Z,1443502894.603 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T05:01:34.604Z,1443502894.604 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T05:01:34.719Z,1443502894.719 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T05:01:34.720Z,1443502894.720 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T05:01:35.278Z,1443502895.278 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T05:01:35.278Z,1443502895.278 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T05:01:35.407Z,1443502895.407 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T05:01:35.409Z,1443502895.409 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T05:01:35.409Z,1443502895.409 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T05:01:35.414Z,1443502895.414 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T05:01:35.487Z,1443502895.487 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T05:01:35.622Z,1443502895.622 [VerticalControl] Loaded
2015-09-29T05:01:35.622Z,1443502895.622 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T05:01:35.623Z,1443502895.623 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T05:01:35.703Z,1443502895.703 [HorizontalControl] Loaded
2015-09-29T05:01:35.704Z,1443502895.704 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T05:01:35.704Z,1443502895.704 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T05:01:35.710Z,1443502895.710 [SpeedControl] Loaded
2015-09-29T05:01:35.711Z,1443502895.711 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T05:01:35.711Z,1443502895.711 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T05:01:35.712Z,1443502895.712 [LoopControl] Loaded
2015-09-29T05:01:35.712Z,1443502895.712 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T05:01:35.712Z,1443502895.712 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T05:01:35.713Z,1443502895.713 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T05:01:35.872Z,1443502895.872 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T05:01:35.884Z,1443502895.884 [SBIT] Loaded
2015-09-29T05:01:35.884Z,1443502895.884 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T05:01:35.885Z,1443502895.885 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T05:01:35.919Z,1443502895.919 [IBIT] Loaded
2015-09-29T05:01:35.919Z,1443502895.919 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T05:01:35.921Z,1443502895.921 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T05:01:36.076Z,1443502896.076 [CBIT] Loaded
2015-09-29T05:01:36.077Z,1443502896.077 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T05:01:36.077Z,1443502896.077 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T05:01:36.078Z,1443502896.078 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T05:01:36.118Z,1443502896.118 [DepthRateCalculator] Loaded
2015-09-29T05:01:36.118Z,1443502896.118 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T05:01:36.124Z,1443502896.124 [PitchRateCalculator] Loaded
2015-09-29T05:01:36.124Z,1443502896.124 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T05:01:36.136Z,1443502896.136 [SpeedCalculator] Loaded
2015-09-29T05:01:36.136Z,1443502896.136 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T05:01:36.157Z,1443502896.157 [TempGradientCalculator] Loaded
2015-09-29T05:01:36.157Z,1443502896.157 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T05:01:36.175Z,1443502896.175 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T05:01:36.175Z,1443502896.175 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T05:01:36.180Z,1443502896.180 [YawRateCalculator] Loaded
2015-09-29T05:01:36.181Z,1443502896.181 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T05:01:36.181Z,1443502896.181 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T05:01:36.182Z,1443502896.182 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T05:01:36.310Z,1443502896.310 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T05:01:36.310Z,1443502896.310 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T05:01:36.310Z,1443502896.310 [StratificationFrontDetector] Loaded
2015-09-29T05:01:36.310Z,1443502896.310 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T05:01:36.311Z,1443502896.311 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T05:01:36.312Z,1443502896.312 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T05:01:36.601Z,1443502896.601 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T05:01:36.602Z,1443502896.602 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T05:01:36.735Z,1443502896.735 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T05:01:36.736Z,1443502896.736 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T05:01:36.800Z,1443502896.800 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T05:01:36.801Z,1443502896.801 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T05:01:36.818Z,1443502896.818 [NavChart] Loaded
2015-09-29T05:01:36.819Z,1443502896.819 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T05:01:36.824Z,1443502896.824 [UniversalFixResidualReporter] Loaded
2015-09-29T05:01:36.824Z,1443502896.824 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T05:01:36.825Z,1443502896.825 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T05:01:36.825Z,1443502896.825 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T05:01:36.836Z,1443502896.836 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T05:01:36.837Z,1443502896.837 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T05:01:37.140Z,1443502897.140 [CTD_NeilBrown] Loaded
2015-09-29T05:01:37.141Z,1443502897.141 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T05:01:37.142Z,1443502897.142 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T05:01:37.143Z,1443502897.143 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T05:01:37.156Z,1443502897.156 [ISUS] Loaded
2015-09-29T05:01:37.156Z,1443502897.156 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T05:01:37.171Z,1443502897.171 [PAR_Licor] Loaded
2015-09-29T05:01:37.171Z,1443502897.171 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T05:01:37.231Z,1443502897.231 [WetLabsBB2FL] Loaded
2015-09-29T05:01:37.231Z,1443502897.231 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T05:01:37.234Z,1443502897.234 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T05:01:37.235Z,1443502897.235 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T05:01:37.235Z,1443502897.235 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T05:01:37.236Z,1443502897.236 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T05:01:37.963Z,1443502897.963 [AHRS_sp3003D] Loaded
2015-09-29T05:01:37.964Z,1443502897.964 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T05:01:38.153Z,1443502898.153 [DataOverHttps] Loaded
2015-09-29T05:01:38.154Z,1443502898.154 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T05:01:38.167Z,1443502898.167 [Depth_Keller] Loaded
2015-09-29T05:01:38.167Z,1443502898.167 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T05:01:38.173Z,1443502898.173 [DropWeight] Loaded
2015-09-29T05:01:38.173Z,1443502898.173 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T05:01:38.330Z,1443502898.330 [DVL_micro] Loaded
2015-09-29T05:01:38.330Z,1443502898.330 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T05:01:38.439Z,1443502898.439 [NAL9602] Loaded
2015-09-29T05:01:38.439Z,1443502898.439 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T05:01:38.486Z,1443502898.486 [Onboard] Loaded
2015-09-29T05:01:38.487Z,1443502898.487 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T05:01:38.498Z,1443502898.498 [Radio_Surface] Loaded
2015-09-29T05:01:38.499Z,1443502898.499 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T05:01:38.502Z,1443502898.502 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T05:01:38.503Z,1443502898.503 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T05:01:38.662Z,1443502898.662 [DAT] Loaded
2015-09-29T05:01:38.663Z,1443502898.663 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T05:01:38.669Z,1443502898.669 [SCPI] Loaded
2015-09-29T05:01:38.670Z,1443502898.670 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T05:01:38.670Z,1443502898.670 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T05:01:38.671Z,1443502898.671 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T05:01:38.801Z,1443502898.801 [BuoyancyServo] Loaded
2015-09-29T05:01:38.802Z,1443502898.802 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T05:01:38.819Z,1443502898.819 [ElevatorServo] Loaded
2015-09-29T05:01:38.819Z,1443502898.819 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T05:01:38.831Z,1443502898.831 [MassServo] Loaded
2015-09-29T05:01:38.831Z,1443502898.831 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T05:01:38.843Z,1443502898.843 [RudderServo] Loaded
2015-09-29T05:01:38.844Z,1443502898.844 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T05:01:38.859Z,1443502898.859 [ThrusterServo] Loaded
2015-09-29T05:01:38.860Z,1443502898.860 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T05:01:38.860Z,1443502898.860 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T05:01:38.861Z,1443502898.861 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T05:01:39.063Z,1443502899.063 [InternalSim] Loaded
2015-09-29T05:01:39.064Z,1443502899.064 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T05:01:39.064Z,1443502899.064 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T05:01:39.065Z,1443502899.065 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T05:01:39.108Z,1443502899.108 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T05:01:39.112Z,1443502899.112 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T05:01:39.113Z,1443502899.113 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T05:01:39.124Z,1443502899.124 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T05:01:39.126Z,1443502899.126 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T05:01:39.127Z,1443502899.127 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T05:01:39.132Z,1443502899.132 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T05:01:39.132Z,1443502899.132 [Supervisor](DEBUG): Running supervisor.
2015-09-29T05:01:39.132Z,1443502899.132 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T05:01:39.139Z,1443502899.139 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T05:01:39.139Z,1443502899.139 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T05:01:39.140Z,1443502899.140 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T05:01:39.142Z,1443502899.142 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T05:01:39.143Z,1443502899.143 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T05:01:39.143Z,1443502899.143 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T05:01:39.144Z,1443502899.144 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T05:01:39.144Z,1443502899.144 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T05:01:39.146Z,1443502899.146 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T05:01:39.146Z,1443502899.146 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T05:01:39.147Z,1443502899.147 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T05:01:39.147Z,1443502899.147 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T05:01:39.148Z,1443502899.148 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T05:01:39.148Z,1443502899.148 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T05:01:39.149Z,1443502899.149 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T05:01:39.149Z,1443502899.149 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T05:01:39.149Z,1443502899.149 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T05:01:39.150Z,1443502899.150 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T05:01:39.150Z,1443502899.150 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T05:01:39.150Z,1443502899.150 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T05:01:39.151Z,1443502899.151 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T05:01:39.152Z,1443502899.152 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T05:01:39.152Z,1443502899.152 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T05:01:39.153Z,1443502899.153 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T05:01:39.153Z,1443502899.153 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T05:01:39.154Z,1443502899.154 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T05:01:39.154Z,1443502899.154 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T05:01:39.154Z,1443502899.154 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T05:01:39.155Z,1443502899.155 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T05:01:39.160Z,1443502899.160 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T05:01:39.183Z,1443502899.183 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T05:01:39.223Z,1443502899.223 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T05:01:39.299Z,1443502899.299 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T05:01:39.307Z,1443502899.307 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T05:01:39.371Z,1443502899.371 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T05:01:39.383Z,1443502899.383 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T05:01:39.385Z,1443502899.385 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T05:01:39.385Z,1443502899.385 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T05:01:39.385Z,1443502899.385 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T05:01:39.385Z,1443502899.385 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T05:01:39.386Z,1443502899.386 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T05:01:39.386Z,1443502899.386 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T05:01:39.386Z,1443502899.386 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T05:01:39.386Z,1443502899.386 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T05:01:39.420Z,1443502899.420 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T05:01:39.459Z,1443502899.459 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T05:01:39.478Z,1443502899.478 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T05:01:39.494Z,1443502899.494 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T05:01:39.561Z,1443502899.561 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T05:01:39.562Z,1443502899.562 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T05:01:39.608Z,1443502899.608 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T05:01:39.611Z,1443502899.611 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T05:01:39.629Z,1443502899.629 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T05:01:39.633Z,1443502899.633 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T05:01:39.652Z,1443502899.652 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T05:01:39.863Z,1443502899.863 [DVL_micro](INFO): Initializing
2015-09-29T05:01:40.011Z,1443502900.011 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T05:01:40.022Z,1443502900.022 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T05:01:40.128Z,1443502900.128 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T05:01:40.135Z,1443502900.135 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T05:01:40.155Z,1443502900.155 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T05:01:40.164Z,1443502900.164 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T05:01:40.194Z,1443502900.194 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T05:01:40.449Z,1443502900.449 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T05:01:40.450Z,1443502900.450 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T05:01:49.325Z,1443502909.325 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:49.654Z,1443502909.654 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:49.789Z,1443502909.789 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:50.189Z,1443502910.189 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T05:01:50.193Z,1443502910.193 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:50.588Z,1443502910.588 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:50.988Z,1443502910.988 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:51.388Z,1443502911.388 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:51.789Z,1443502911.789 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:52.187Z,1443502912.187 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:52.587Z,1443502912.587 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:52.987Z,1443502912.987 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:53.387Z,1443502913.387 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:53.787Z,1443502913.787 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:54.187Z,1443502914.187 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:54.586Z,1443502914.586 [NAL9602](INFO): No messages in MT queue
2015-09-29T05:01:54.587Z,1443502914.587 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:54.987Z,1443502914.987 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:55.387Z,1443502915.387 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:55.787Z,1443502915.787 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:56.187Z,1443502916.187 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:56.588Z,1443502916.588 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:56.988Z,1443502916.988 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:57.387Z,1443502917.387 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:57.787Z,1443502917.787 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:58.187Z,1443502918.187 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:58.588Z,1443502918.588 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:58.987Z,1443502918.987 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:59.387Z,1443502919.387 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:59.787Z,1443502919.787 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:01:59.820Z,1443502919.820 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T05:02:00.187Z,1443502920.187 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:02:00.587Z,1443502920.587 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:02:00.987Z,1443502920.987 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:02:01.389Z,1443502921.389 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:02:01.787Z,1443502921.787 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:02:02.188Z,1443502922.188 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:02:02.588Z,1443502922.588 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:02:02.987Z,1443502922.987 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:02:03.387Z,1443502923.387 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T05:02:03.788Z,1443502923.788 [D