2015-09-29T04:37:47.187Z,1443501467.187 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T04:37:47.191Z,1443501467.191 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T04:37:47.191Z,1443501467.191 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T04:37:47.192Z,1443501467.192 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T04:37:47.194Z,1443501467.194 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T04:37:47.194Z,1443501467.194 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T04:37:47.197Z,1443501467.197 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T04:37:47.209Z,1443501467.209 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T04:37:47.214Z,1443501467.214 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T04:37:47.214Z,1443501467.214 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T04:37:47.215Z,1443501467.215 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T04:37:47.218Z,1443501467.218 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T04:37:47.218Z,1443501467.218 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T04:37:47.221Z,1443501467.221 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T04:37:47.221Z,1443501467.221 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T04:37:47.225Z,1443501467.225 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T04:37:47.617Z,1443501467.617 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T04:37:47.619Z,1443501467.619 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T04:37:47.809Z,1443501467.809 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T04:37:47.811Z,1443501467.811 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T04:37:47.955Z,1443501467.955 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T04:37:47.955Z,1443501467.955 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T04:37:48.103Z,1443501468.103 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T04:37:48.104Z,1443501468.104 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T04:37:48.198Z,1443501468.198 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T04:37:48.419Z,1443501468.419 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T04:37:48.420Z,1443501468.420 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T04:37:48.517Z,1443501468.517 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T04:37:48.518Z,1443501468.518 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T04:37:48.831Z,1443501468.831 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T04:37:48.832Z,1443501468.832 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T04:37:49.231Z,1443501469.231 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T04:37:49.232Z,1443501469.232 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T04:37:49.583Z,1443501469.583 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T04:37:49.585Z,1443501469.585 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T04:37:50.180Z,1443501470.180 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T04:37:50.180Z,1443501470.180 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T04:37:50.411Z,1443501470.411 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T04:37:50.412Z,1443501470.412 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T04:37:50.531Z,1443501470.531 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T04:37:50.531Z,1443501470.531 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T04:37:51.043Z,1443501471.043 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T04:37:51.043Z,1443501471.043 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T04:37:51.231Z,1443501471.231 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T04:37:51.233Z,1443501471.233 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T04:37:51.233Z,1443501471.233 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T04:37:51.238Z,1443501471.238 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T04:37:51.313Z,1443501471.313 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T04:37:51.446Z,1443501471.446 [VerticalControl] Loaded
2015-09-29T04:37:51.447Z,1443501471.447 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T04:37:51.447Z,1443501471.447 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T04:37:51.532Z,1443501471.532 [HorizontalControl] Loaded
2015-09-29T04:37:51.532Z,1443501471.532 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T04:37:51.533Z,1443501471.533 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T04:37:51.539Z,1443501471.539 [SpeedControl] Loaded
2015-09-29T04:37:51.539Z,1443501471.539 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T04:37:51.540Z,1443501471.540 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T04:37:51.540Z,1443501471.540 [LoopControl] Loaded
2015-09-29T04:37:51.541Z,1443501471.541 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T04:37:51.541Z,1443501471.541 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T04:37:51.542Z,1443501471.542 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T04:37:51.701Z,1443501471.701 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T04:37:51.713Z,1443501471.713 [SBIT] Loaded
2015-09-29T04:37:51.713Z,1443501471.713 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T04:37:51.714Z,1443501471.714 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T04:37:51.747Z,1443501471.747 [IBIT] Loaded
2015-09-29T04:37:51.748Z,1443501471.748 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T04:37:51.750Z,1443501471.750 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T04:37:51.904Z,1443501471.904 [CBIT] Loaded
2015-09-29T04:37:51.904Z,1443501471.904 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T04:37:51.904Z,1443501471.904 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T04:37:51.905Z,1443501471.905 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T04:37:51.942Z,1443501471.942 [DepthRateCalculator] Loaded
2015-09-29T04:37:51.943Z,1443501471.943 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T04:37:51.952Z,1443501471.952 [PitchRateCalculator] Loaded
2015-09-29T04:37:51.953Z,1443501471.953 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T04:37:51.964Z,1443501471.964 [SpeedCalculator] Loaded
2015-09-29T04:37:51.964Z,1443501471.964 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T04:37:51.981Z,1443501471.981 [TempGradientCalculator] Loaded
2015-09-29T04:37:51.982Z,1443501471.982 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T04:37:52.003Z,1443501472.003 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T04:37:52.003Z,1443501472.003 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T04:37:52.008Z,1443501472.008 [YawRateCalculator] Loaded
2015-09-29T04:37:52.009Z,1443501472.009 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T04:37:52.009Z,1443501472.009 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T04:37:52.010Z,1443501472.010 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T04:37:52.127Z,1443501472.127 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T04:37:52.127Z,1443501472.127 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T04:37:52.127Z,1443501472.127 [StratificationFrontDetector] Loaded
2015-09-29T04:37:52.127Z,1443501472.127 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T04:37:52.128Z,1443501472.128 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T04:37:52.128Z,1443501472.128 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T04:37:52.420Z,1443501472.420 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T04:37:52.421Z,1443501472.421 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T04:37:52.553Z,1443501472.553 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T04:37:52.553Z,1443501472.553 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T04:37:52.617Z,1443501472.617 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T04:37:52.618Z,1443501472.618 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T04:37:52.635Z,1443501472.635 [NavChart] Loaded
2015-09-29T04:37:52.635Z,1443501472.635 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T04:37:52.641Z,1443501472.641 [UniversalFixResidualReporter] Loaded
2015-09-29T04:37:52.641Z,1443501472.641 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T04:37:52.641Z,1443501472.641 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T04:37:52.642Z,1443501472.642 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T04:37:52.652Z,1443501472.652 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T04:37:52.652Z,1443501472.652 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T04:37:52.951Z,1443501472.951 [CTD_NeilBrown] Loaded
2015-09-29T04:37:52.951Z,1443501472.951 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T04:37:52.954Z,1443501472.954 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T04:37:52.954Z,1443501472.954 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T04:37:52.967Z,1443501472.967 [ISUS] Loaded
2015-09-29T04:37:52.968Z,1443501472.968 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T04:37:52.986Z,1443501472.986 [PAR_Licor] Loaded
2015-09-29T04:37:52.986Z,1443501472.986 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T04:37:53.042Z,1443501473.042 [WetLabsBB2FL] Loaded
2015-09-29T04:37:53.042Z,1443501473.042 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T04:37:53.046Z,1443501473.046 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T04:37:53.046Z,1443501473.046 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T04:37:53.047Z,1443501473.047 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T04:37:53.048Z,1443501473.048 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T04:37:53.762Z,1443501473.762 [AHRS_sp3003D] Loaded
2015-09-29T04:37:53.762Z,1443501473.762 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T04:37:53.956Z,1443501473.956 [DataOverHttps] Loaded
2015-09-29T04:37:53.956Z,1443501473.956 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T04:37:53.970Z,1443501473.970 [Depth_Keller] Loaded
2015-09-29T04:37:53.974Z,1443501473.974 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T04:37:53.979Z,1443501473.979 [DropWeight] Loaded
2015-09-29T04:37:53.979Z,1443501473.979 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T04:37:54.131Z,1443501474.131 [DVL_micro] Loaded
2015-09-29T04:37:54.131Z,1443501474.131 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T04:37:54.239Z,1443501474.239 [NAL9602] Loaded
2015-09-29T04:37:54.239Z,1443501474.239 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T04:37:54.286Z,1443501474.286 [Onboard] Loaded
2015-09-29T04:37:54.286Z,1443501474.286 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T04:37:54.298Z,1443501474.298 [Radio_Surface] Loaded
2015-09-29T04:37:54.298Z,1443501474.298 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T04:37:54.302Z,1443501474.302 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T04:37:54.303Z,1443501474.303 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T04:37:54.457Z,1443501474.457 [DAT] Loaded
2015-09-29T04:37:54.457Z,1443501474.457 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T04:37:54.468Z,1443501474.468 [SCPI] Loaded
2015-09-29T04:37:54.468Z,1443501474.468 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T04:37:54.469Z,1443501474.469 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T04:37:54.470Z,1443501474.470 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T04:37:54.605Z,1443501474.605 [BuoyancyServo] Loaded
2015-09-29T04:37:54.605Z,1443501474.605 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T04:37:54.618Z,1443501474.618 [ElevatorServo] Loaded
2015-09-29T04:37:54.619Z,1443501474.619 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T04:37:54.630Z,1443501474.630 [MassServo] Loaded
2015-09-29T04:37:54.631Z,1443501474.631 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T04:37:54.647Z,1443501474.647 [RudderServo] Loaded
2015-09-29T04:37:54.647Z,1443501474.647 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T04:37:54.658Z,1443501474.658 [ThrusterServo] Loaded
2015-09-29T04:37:54.658Z,1443501474.658 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T04:37:54.659Z,1443501474.659 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T04:37:54.660Z,1443501474.660 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T04:37:54.859Z,1443501474.859 [InternalSim] Loaded
2015-09-29T04:37:54.859Z,1443501474.859 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T04:37:54.860Z,1443501474.860 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T04:37:54.860Z,1443501474.860 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T04:37:54.903Z,1443501474.903 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T04:37:54.907Z,1443501474.907 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T04:37:54.908Z,1443501474.908 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T04:37:54.915Z,1443501474.915 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T04:37:54.918Z,1443501474.918 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T04:37:54.919Z,1443501474.919 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T04:37:54.923Z,1443501474.923 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T04:37:54.923Z,1443501474.923 [Supervisor](DEBUG): Running supervisor.
2015-09-29T04:37:54.924Z,1443501474.924 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T04:37:54.931Z,1443501474.931 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T04:37:54.931Z,1443501474.931 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T04:37:54.932Z,1443501474.932 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T04:37:54.934Z,1443501474.934 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T04:37:54.935Z,1443501474.935 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T04:37:54.935Z,1443501474.935 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T04:37:54.935Z,1443501474.935 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T04:37:54.936Z,1443501474.936 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T04:37:54.937Z,1443501474.937 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T04:37:54.938Z,1443501474.938 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T04:37:54.939Z,1443501474.939 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T04:37:54.939Z,1443501474.939 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T04:37:54.940Z,1443501474.940 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T04:37:54.940Z,1443501474.940 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T04:37:54.940Z,1443501474.940 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T04:37:54.941Z,1443501474.941 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T04:37:54.941Z,1443501474.941 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T04:37:54.941Z,1443501474.941 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T04:37:54.942Z,1443501474.942 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T04:37:54.942Z,1443501474.942 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T04:37:54.943Z,1443501474.943 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T04:37:54.943Z,1443501474.943 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T04:37:54.944Z,1443501474.944 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T04:37:54.944Z,1443501474.944 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T04:37:54.945Z,1443501474.945 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T04:37:54.945Z,1443501474.945 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T04:37:54.946Z,1443501474.946 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T04:37:54.946Z,1443501474.946 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T04:37:54.946Z,1443501474.946 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T04:37:54.952Z,1443501474.952 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T04:37:54.987Z,1443501474.987 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T04:37:55.075Z,1443501475.075 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T04:37:55.083Z,1443501475.083 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T04:37:55.149Z,1443501475.149 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T04:37:55.166Z,1443501475.166 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T04:37:55.177Z,1443501475.177 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T04:37:55.212Z,1443501475.212 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T04:37:55.215Z,1443501475.215 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T04:37:55.215Z,1443501475.215 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T04:37:55.215Z,1443501475.215 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T04:37:55.215Z,1443501475.215 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T04:37:55.216Z,1443501475.216 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T04:37:55.216Z,1443501475.216 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T04:37:55.216Z,1443501475.216 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T04:37:55.216Z,1443501475.216 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T04:37:55.293Z,1443501475.293 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T04:37:55.304Z,1443501475.304 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T04:37:55.305Z,1443501475.305 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T04:37:55.353Z,1443501475.353 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T04:37:55.354Z,1443501475.354 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T04:37:55.399Z,1443501475.399 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T04:37:55.402Z,1443501475.402 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T04:37:55.424Z,1443501475.424 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T04:37:55.443Z,1443501475.443 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T04:37:55.449Z,1443501475.449 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T04:37:55.754Z,1443501475.754 [DVL_micro](INFO): Initializing
2015-09-29T04:37:55.912Z,1443501475.912 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:37:55.940Z,1443501475.940 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:37:56.049Z,1443501476.049 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T04:37:56.077Z,1443501476.077 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T04:37:56.106Z,1443501476.106 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T04:37:56.115Z,1443501476.115 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T04:37:56.134Z,1443501476.134 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T04:37:56.373Z,1443501476.373 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:37:56.382Z,1443501476.382 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:38:05.402Z,1443501485.402 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:05.713Z,1443501485.713 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:05.853Z,1443501485.853 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:06.255Z,1443501486.255 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T04:38:06.275Z,1443501486.275 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:06.652Z,1443501486.652 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:07.052Z,1443501487.052 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:07.451Z,1443501487.451 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:07.852Z,1443501487.852 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:08.250Z,1443501488.250 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:08.652Z,1443501488.652 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:09.050Z,1443501489.050 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:09.451Z,1443501489.451 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:09.857Z,1443501489.857 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:10.251Z,1443501490.251 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:10.650Z,1443501490.650 [NAL9602](INFO): No messages in MT queue
2015-09-29T04:38:10.659Z,1443501490.659 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:11.052Z,1443501491.052 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:11.451Z,1443501491.451 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:11.851Z,1443501491.851 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:12.251Z,1443501492.251 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:12.651Z,1443501492.651 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:13.051Z,1443501493.051 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:13.452Z,1443501493.452 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:13.851Z,1443501493.851 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:14.251Z,1443501494.251 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:14.651Z,1443501494.651 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:15.051Z,1443501495.051 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:15.451Z,1443501495.451 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:15.466Z,1443501495.466 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T04:38:15.851Z,1443501495.851 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:16.252Z,1443501496.252 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:16.652Z,1443501496.652 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:17.051Z,1443501497.051 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:17.451Z,1443501497.451 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:17.851Z,1443501497.851 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:18.251Z,1443501498.251 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:18.651Z,1443501498.651 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:19.051Z,1443501499.051 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:19.451Z,1443501499.451 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:38:19.851Z,1443501499.851 [D