2015-09-29T04:29:55.108Z,1443500995.108 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T04:29:55.112Z,1443500995.112 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T04:29:55.112Z,1443500995.112 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T04:29:55.113Z,1443500995.113 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T04:29:55.115Z,1443500995.115 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T04:29:55.116Z,1443500995.116 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T04:29:55.119Z,1443500995.119 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T04:29:55.131Z,1443500995.131 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T04:29:55.135Z,1443500995.135 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T04:29:55.136Z,1443500995.136 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T04:29:55.137Z,1443500995.137 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T04:29:55.139Z,1443500995.139 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T04:29:55.140Z,1443500995.140 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T04:29:55.142Z,1443500995.142 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T04:29:55.142Z,1443500995.142 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T04:29:55.146Z,1443500995.146 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T04:29:55.537Z,1443500995.537 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T04:29:55.539Z,1443500995.539 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T04:29:55.732Z,1443500995.732 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T04:29:55.734Z,1443500995.734 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T04:29:55.880Z,1443500995.880 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T04:29:55.881Z,1443500995.881 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T04:29:56.028Z,1443500996.028 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T04:29:56.029Z,1443500996.029 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T04:29:56.123Z,1443500996.123 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T04:29:56.344Z,1443500996.344 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T04:29:56.345Z,1443500996.345 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T04:29:56.441Z,1443500996.441 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T04:29:56.441Z,1443500996.441 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T04:29:56.757Z,1443500996.757 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T04:29:56.757Z,1443500996.757 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T04:29:57.157Z,1443500997.157 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T04:29:57.157Z,1443500997.157 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T04:29:57.513Z,1443500997.513 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T04:29:57.515Z,1443500997.515 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T04:29:58.113Z,1443500998.113 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T04:29:58.114Z,1443500998.114 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T04:29:58.345Z,1443500998.345 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T04:29:58.345Z,1443500998.345 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T04:29:58.461Z,1443500998.461 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T04:29:58.461Z,1443500998.461 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T04:29:58.976Z,1443500998.976 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T04:29:58.977Z,1443500998.977 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T04:29:59.140Z,1443500999.140 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T04:29:59.142Z,1443500999.142 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T04:29:59.143Z,1443500999.143 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T04:29:59.147Z,1443500999.147 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T04:29:59.219Z,1443500999.219 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T04:29:59.354Z,1443500999.354 [VerticalControl] Loaded
2015-09-29T04:29:59.354Z,1443500999.354 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T04:29:59.355Z,1443500999.355 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T04:29:59.436Z,1443500999.436 [HorizontalControl] Loaded
2015-09-29T04:29:59.437Z,1443500999.437 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T04:29:59.437Z,1443500999.437 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T04:29:59.443Z,1443500999.443 [SpeedControl] Loaded
2015-09-29T04:29:59.443Z,1443500999.443 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T04:29:59.444Z,1443500999.444 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T04:29:59.445Z,1443500999.445 [LoopControl] Loaded
2015-09-29T04:29:59.445Z,1443500999.445 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T04:29:59.445Z,1443500999.445 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T04:29:59.446Z,1443500999.446 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T04:29:59.604Z,1443500999.604 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T04:29:59.620Z,1443500999.620 [SBIT] Loaded
2015-09-29T04:29:59.621Z,1443500999.621 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T04:29:59.621Z,1443500999.621 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T04:29:59.651Z,1443500999.651 [IBIT] Loaded
2015-09-29T04:29:59.652Z,1443500999.652 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T04:29:59.654Z,1443500999.654 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T04:29:59.809Z,1443500999.809 [CBIT] Loaded
2015-09-29T04:29:59.809Z,1443500999.809 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T04:29:59.810Z,1443500999.810 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T04:29:59.810Z,1443500999.810 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T04:29:59.852Z,1443500999.852 [DepthRateCalculator] Loaded
2015-09-29T04:29:59.852Z,1443500999.852 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T04:29:59.857Z,1443500999.857 [PitchRateCalculator] Loaded
2015-09-29T04:29:59.858Z,1443500999.858 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T04:29:59.869Z,1443500999.869 [SpeedCalculator] Loaded
2015-09-29T04:29:59.870Z,1443500999.870 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T04:29:59.891Z,1443500999.891 [TempGradientCalculator] Loaded
2015-09-29T04:29:59.891Z,1443500999.891 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T04:29:59.909Z,1443500999.909 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T04:29:59.909Z,1443500999.909 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T04:29:59.914Z,1443500999.914 [YawRateCalculator] Loaded
2015-09-29T04:29:59.915Z,1443500999.915 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T04:29:59.915Z,1443500999.915 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T04:29:59.916Z,1443500999.916 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T04:30:00.040Z,1443501000.040 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T04:30:00.040Z,1443501000.040 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T04:30:00.041Z,1443501000.041 [StratificationFrontDetector] Loaded
2015-09-29T04:30:00.041Z,1443501000.041 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T04:30:00.041Z,1443501000.041 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T04:30:00.042Z,1443501000.042 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T04:30:00.333Z,1443501000.333 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T04:30:00.334Z,1443501000.334 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T04:30:00.467Z,1443501000.467 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T04:30:00.467Z,1443501000.467 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T04:30:00.532Z,1443501000.532 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T04:30:00.532Z,1443501000.532 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T04:30:00.550Z,1443501000.550 [NavChart] Loaded
2015-09-29T04:30:00.550Z,1443501000.550 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T04:30:00.556Z,1443501000.556 [UniversalFixResidualReporter] Loaded
2015-09-29T04:30:00.556Z,1443501000.556 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T04:30:00.556Z,1443501000.556 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T04:30:00.557Z,1443501000.557 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T04:30:00.566Z,1443501000.566 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T04:30:00.566Z,1443501000.566 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T04:30:00.865Z,1443501000.865 [CTD_NeilBrown] Loaded
2015-09-29T04:30:00.865Z,1443501000.865 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T04:30:00.868Z,1443501000.868 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T04:30:00.868Z,1443501000.868 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T04:30:00.881Z,1443501000.881 [ISUS] Loaded
2015-09-29T04:30:00.881Z,1443501000.881 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T04:30:00.896Z,1443501000.896 [PAR_Licor] Loaded
2015-09-29T04:30:00.896Z,1443501000.896 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T04:30:00.956Z,1443501000.956 [WetLabsBB2FL] Loaded
2015-09-29T04:30:00.956Z,1443501000.956 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T04:30:00.959Z,1443501000.959 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T04:30:00.960Z,1443501000.960 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T04:30:00.960Z,1443501000.960 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T04:30:00.961Z,1443501000.961 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T04:30:01.686Z,1443501001.686 [AHRS_sp3003D] Loaded
2015-09-29T04:30:01.687Z,1443501001.687 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T04:30:01.880Z,1443501001.880 [DataOverHttps] Loaded
2015-09-29T04:30:01.881Z,1443501001.881 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T04:30:01.894Z,1443501001.894 [Depth_Keller] Loaded
2015-09-29T04:30:01.895Z,1443501001.895 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T04:30:01.904Z,1443501001.904 [DropWeight] Loaded
2015-09-29T04:30:01.904Z,1443501001.904 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T04:30:02.057Z,1443501002.057 [DVL_micro] Loaded
2015-09-29T04:30:02.057Z,1443501002.057 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T04:30:02.165Z,1443501002.165 [NAL9602] Loaded
2015-09-29T04:30:02.166Z,1443501002.166 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T04:30:02.213Z,1443501002.213 [Onboard] Loaded
2015-09-29T04:30:02.213Z,1443501002.213 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T04:30:02.225Z,1443501002.225 [Radio_Surface] Loaded
2015-09-29T04:30:02.225Z,1443501002.225 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T04:30:02.227Z,1443501002.227 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T04:30:02.228Z,1443501002.228 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T04:30:02.373Z,1443501002.373 [DAT] Loaded
2015-09-29T04:30:02.374Z,1443501002.374 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T04:30:02.380Z,1443501002.380 [SCPI] Loaded
2015-09-29T04:30:02.381Z,1443501002.381 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T04:30:02.381Z,1443501002.381 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T04:30:02.382Z,1443501002.382 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T04:30:02.504Z,1443501002.504 [BuoyancyServo] Loaded
2015-09-29T04:30:02.504Z,1443501002.504 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T04:30:02.517Z,1443501002.517 [ElevatorServo] Loaded
2015-09-29T04:30:02.517Z,1443501002.517 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T04:30:02.529Z,1443501002.529 [MassServo] Loaded
2015-09-29T04:30:02.530Z,1443501002.530 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T04:30:02.542Z,1443501002.542 [RudderServo] Loaded
2015-09-29T04:30:02.542Z,1443501002.542 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T04:30:02.554Z,1443501002.554 [ThrusterServo] Loaded
2015-09-29T04:30:02.554Z,1443501002.554 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T04:30:02.554Z,1443501002.554 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T04:30:02.555Z,1443501002.555 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T04:30:02.736Z,1443501002.736 [InternalSim] Loaded
2015-09-29T04:30:02.737Z,1443501002.737 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T04:30:02.737Z,1443501002.737 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T04:30:02.738Z,1443501002.738 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T04:30:02.777Z,1443501002.777 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T04:30:02.781Z,1443501002.781 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T04:30:02.782Z,1443501002.782 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T04:30:02.789Z,1443501002.789 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T04:30:02.790Z,1443501002.790 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T04:30:02.790Z,1443501002.790 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T04:30:02.795Z,1443501002.795 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T04:30:02.795Z,1443501002.795 [Supervisor](DEBUG): Running supervisor.
2015-09-29T04:30:02.796Z,1443501002.796 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T04:30:02.799Z,1443501002.799 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T04:30:02.799Z,1443501002.799 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T04:30:02.800Z,1443501002.800 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T04:30:02.802Z,1443501002.802 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T04:30:02.803Z,1443501002.803 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T04:30:02.803Z,1443501002.803 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T04:30:02.803Z,1443501002.803 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T04:30:02.804Z,1443501002.804 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T04:30:02.805Z,1443501002.805 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T04:30:02.806Z,1443501002.806 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T04:30:02.807Z,1443501002.807 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T04:30:02.807Z,1443501002.807 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T04:30:02.808Z,1443501002.808 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T04:30:02.808Z,1443501002.808 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T04:30:02.809Z,1443501002.809 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T04:30:02.809Z,1443501002.809 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T04:30:02.809Z,1443501002.809 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T04:30:02.810Z,1443501002.810 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T04:30:02.810Z,1443501002.810 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T04:30:02.811Z,1443501002.811 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T04:30:02.811Z,1443501002.811 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T04:30:02.812Z,1443501002.812 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T04:30:02.813Z,1443501002.813 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T04:30:02.813Z,1443501002.813 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T04:30:02.814Z,1443501002.814 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T04:30:02.814Z,1443501002.814 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T04:30:02.814Z,1443501002.814 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T04:30:02.815Z,1443501002.815 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T04:30:02.815Z,1443501002.815 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T04:30:02.821Z,1443501002.821 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T04:30:02.840Z,1443501002.840 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T04:30:02.880Z,1443501002.880 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T04:30:02.935Z,1443501002.935 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T04:30:02.941Z,1443501002.941 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T04:30:02.988Z,1443501002.988 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T04:30:02.996Z,1443501002.996 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T04:30:02.000Z,1443501003.000 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T04:30:03.000Z,1443501003.000 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T04:30:03.001Z,1443501003.001 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T04:30:03.001Z,1443501003.001 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T04:30:03.001Z,1443501003.001 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T04:30:03.001Z,1443501003.001 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T04:30:03.001Z,1443501003.001 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T04:30:03.002Z,1443501003.002 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T04:30:03.016Z,1443501003.016 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T04:30:03.053Z,1443501003.053 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T04:30:03.100Z,1443501003.100 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T04:30:03.101Z,1443501003.101 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T04:30:03.156Z,1443501003.156 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T04:30:03.157Z,1443501003.157 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T04:30:03.204Z,1443501003.204 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T04:30:03.206Z,1443501003.206 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T04:30:03.221Z,1443501003.221 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T04:30:03.224Z,1443501003.224 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T04:30:03.249Z,1443501003.249 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T04:30:03.441Z,1443501003.441 [DVL_micro](INFO): Initializing
2015-09-29T04:30:03.588Z,1443501003.588 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:30:03.596Z,1443501003.596 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:30:03.720Z,1443501003.720 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T04:30:03.732Z,1443501003.732 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T04:30:03.740Z,1443501003.740 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T04:30:03.756Z,1443501003.756 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T04:30:03.768Z,1443501003.768 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T04:30:04.048Z,1443501004.048 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:30:04.049Z,1443501004.049 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:30:12.833Z,1443501012.833 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:13.130Z,1443501013.130 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:13.278Z,1443501013.278 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:13.679Z,1443501013.679 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T04:30:13.683Z,1443501013.683 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:14.077Z,1443501014.077 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:14.477Z,1443501014.477 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:14.876Z,1443501014.876 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:15.276Z,1443501015.276 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:15.676Z,1443501015.676 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:16.077Z,1443501016.077 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:16.476Z,1443501016.476 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:16.886Z,1443501016.886 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:17.286Z,1443501017.286 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:17.686Z,1443501017.686 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:18.085Z,1443501018.085 [NAL9602](INFO): No messages in MT queue
2015-09-29T04:30:18.086Z,1443501018.086 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:18.486Z,1443501018.486 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:18.886Z,1443501018.886 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:19.287Z,1443501019.287 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:19.686Z,1443501019.686 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:20.086Z,1443501020.086 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:20.486Z,1443501020.486 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:20.886Z,1443501020.886 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:21.276Z,1443501021.276 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:21.685Z,1443501021.685 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:22.076Z,1443501022.076 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:22.486Z,1443501022.486 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:22.886Z,1443501022.886 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:23.286Z,1443501023.286 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:23.301Z,1443501023.301 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T04:30:23.684Z,1443501023.684 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:24.084Z,1443501024.084 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:24.476Z,1443501024.476 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:24.876Z,1443501024.876 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:25.277Z,1443501025.277 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:25.677Z,1443501025.677 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:26.076Z,1443501026.076 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:26.476Z,1443501026.476 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:26.876Z,1443501026.876 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:30:27.276Z,1443501027.276 [D