2015-09-29T04:21:59.699Z,1443500519.699 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T04:21:59.702Z,1443500519.702 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T04:21:59.703Z,1443500519.703 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T04:21:59.703Z,1443500519.703 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T04:21:59.707Z,1443500519.707 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T04:21:59.708Z,1443500519.708 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T04:21:59.710Z,1443500519.710 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T04:21:59.723Z,1443500519.723 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T04:21:59.727Z,1443500519.727 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T04:21:59.728Z,1443500519.728 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T04:21:59.728Z,1443500519.728 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T04:21:59.731Z,1443500519.731 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T04:21:59.732Z,1443500519.732 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T04:21:59.734Z,1443500519.734 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T04:21:59.734Z,1443500519.734 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T04:21:59.738Z,1443500519.738 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T04:22:00.127Z,1443500520.127 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T04:22:00.128Z,1443500520.128 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T04:22:00.320Z,1443500520.320 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T04:22:00.322Z,1443500520.322 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T04:22:00.464Z,1443500520.464 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T04:22:00.465Z,1443500520.465 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T04:22:00.612Z,1443500520.612 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T04:22:00.613Z,1443500520.613 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T04:22:00.707Z,1443500520.707 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T04:22:00.928Z,1443500520.928 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T04:22:00.929Z,1443500520.929 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T04:22:01.024Z,1443500521.024 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T04:22:01.025Z,1443500521.025 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T04:22:01.336Z,1443500521.336 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T04:22:01.337Z,1443500521.337 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T04:22:01.737Z,1443500521.737 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T04:22:01.737Z,1443500521.737 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T04:22:02.092Z,1443500522.092 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T04:22:02.094Z,1443500522.094 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T04:22:02.692Z,1443500522.692 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T04:22:02.693Z,1443500522.693 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T04:22:02.924Z,1443500522.924 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T04:22:02.925Z,1443500522.925 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T04:22:03.034Z,1443500523.034 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T04:22:03.035Z,1443500523.035 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T04:22:03.550Z,1443500523.550 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T04:22:03.551Z,1443500523.551 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T04:22:03.723Z,1443500523.723 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T04:22:03.725Z,1443500523.725 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T04:22:03.725Z,1443500523.725 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T04:22:03.730Z,1443500523.730 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T04:22:03.804Z,1443500523.804 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T04:22:03.940Z,1443500523.940 [VerticalControl] Loaded
2015-09-29T04:22:03.940Z,1443500523.940 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T04:22:03.941Z,1443500523.941 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T04:22:04.023Z,1443500524.023 [HorizontalControl] Loaded
2015-09-29T04:22:04.024Z,1443500524.024 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T04:22:04.024Z,1443500524.024 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T04:22:04.030Z,1443500524.030 [SpeedControl] Loaded
2015-09-29T04:22:04.031Z,1443500524.031 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T04:22:04.035Z,1443500524.035 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T04:22:04.036Z,1443500524.036 [LoopControl] Loaded
2015-09-29T04:22:04.036Z,1443500524.036 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T04:22:04.037Z,1443500524.037 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T04:22:04.038Z,1443500524.038 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T04:22:04.198Z,1443500524.198 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T04:22:04.210Z,1443500524.210 [SBIT] Loaded
2015-09-29T04:22:04.210Z,1443500524.210 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T04:22:04.215Z,1443500524.215 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T04:22:04.246Z,1443500524.246 [IBIT] Loaded
2015-09-29T04:22:04.246Z,1443500524.246 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T04:22:04.248Z,1443500524.248 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T04:22:04.404Z,1443500524.404 [CBIT] Loaded
2015-09-29T04:22:04.404Z,1443500524.404 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T04:22:04.405Z,1443500524.405 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T04:22:04.406Z,1443500524.406 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T04:22:04.447Z,1443500524.447 [DepthRateCalculator] Loaded
2015-09-29T04:22:04.447Z,1443500524.447 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T04:22:04.453Z,1443500524.453 [PitchRateCalculator] Loaded
2015-09-29T04:22:04.453Z,1443500524.453 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T04:22:04.465Z,1443500524.465 [SpeedCalculator] Loaded
2015-09-29T04:22:04.465Z,1443500524.465 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T04:22:04.486Z,1443500524.486 [TempGradientCalculator] Loaded
2015-09-29T04:22:04.487Z,1443500524.487 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T04:22:04.504Z,1443500524.504 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T04:22:04.505Z,1443500524.505 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T04:22:04.514Z,1443500524.514 [YawRateCalculator] Loaded
2015-09-29T04:22:04.514Z,1443500524.514 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T04:22:04.515Z,1443500524.515 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T04:22:04.516Z,1443500524.516 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T04:22:04.635Z,1443500524.635 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T04:22:04.635Z,1443500524.635 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T04:22:04.635Z,1443500524.635 [StratificationFrontDetector] Loaded
2015-09-29T04:22:04.635Z,1443500524.635 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T04:22:04.636Z,1443500524.636 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T04:22:04.637Z,1443500524.637 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T04:22:04.932Z,1443500524.932 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T04:22:04.933Z,1443500524.933 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T04:22:05.067Z,1443500525.067 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T04:22:05.067Z,1443500525.067 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T04:22:05.128Z,1443500525.128 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T04:22:05.129Z,1443500525.129 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T04:22:05.147Z,1443500525.147 [NavChart] Loaded
2015-09-29T04:22:05.147Z,1443500525.147 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T04:22:05.156Z,1443500525.156 [UniversalFixResidualReporter] Loaded
2015-09-29T04:22:05.157Z,1443500525.157 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T04:22:05.157Z,1443500525.157 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T04:22:05.158Z,1443500525.158 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T04:22:05.166Z,1443500525.166 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T04:22:05.167Z,1443500525.167 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T04:22:05.469Z,1443500525.469 [CTD_NeilBrown] Loaded
2015-09-29T04:22:05.469Z,1443500525.469 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T04:22:05.471Z,1443500525.471 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T04:22:05.472Z,1443500525.472 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T04:22:05.485Z,1443500525.485 [ISUS] Loaded
2015-09-29T04:22:05.485Z,1443500525.485 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T04:22:05.504Z,1443500525.504 [PAR_Licor] Loaded
2015-09-29T04:22:05.505Z,1443500525.505 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T04:22:05.566Z,1443500525.566 [WetLabsBB2FL] Loaded
2015-09-29T04:22:05.566Z,1443500525.566 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T04:22:05.571Z,1443500525.571 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T04:22:05.572Z,1443500525.572 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T04:22:05.572Z,1443500525.572 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T04:22:05.573Z,1443500525.573 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T04:22:06.298Z,1443500526.298 [AHRS_sp3003D] Loaded
2015-09-29T04:22:06.298Z,1443500526.298 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T04:22:06.491Z,1443500526.491 [DataOverHttps] Loaded
2015-09-29T04:22:06.491Z,1443500526.491 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T04:22:06.505Z,1443500526.505 [Depth_Keller] Loaded
2015-09-29T04:22:06.505Z,1443500526.505 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T04:22:06.510Z,1443500526.510 [DropWeight] Loaded
2015-09-29T04:22:06.510Z,1443500526.510 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T04:22:06.667Z,1443500526.667 [DVL_micro] Loaded
2015-09-29T04:22:06.668Z,1443500526.668 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T04:22:06.777Z,1443500526.777 [NAL9602] Loaded
2015-09-29T04:22:06.777Z,1443500526.777 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T04:22:06.825Z,1443500526.825 [Onboard] Loaded
2015-09-29T04:22:06.825Z,1443500526.825 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T04:22:06.837Z,1443500526.837 [Radio_Surface] Loaded
2015-09-29T04:22:06.837Z,1443500526.837 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T04:22:06.839Z,1443500526.839 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T04:22:06.840Z,1443500526.840 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T04:22:07.001Z,1443500527.001 [DAT] Loaded
2015-09-29T04:22:07.002Z,1443500527.002 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T04:22:07.009Z,1443500527.009 [SCPI] Loaded
2015-09-29T04:22:07.009Z,1443500527.009 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T04:22:07.010Z,1443500527.010 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T04:22:07.010Z,1443500527.010 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T04:22:07.141Z,1443500527.141 [BuoyancyServo] Loaded
2015-09-29T04:22:07.142Z,1443500527.142 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T04:22:07.159Z,1443500527.159 [ElevatorServo] Loaded
2015-09-29T04:22:07.159Z,1443500527.159 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T04:22:07.171Z,1443500527.171 [MassServo] Loaded
2015-09-29T04:22:07.171Z,1443500527.171 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T04:22:07.183Z,1443500527.183 [RudderServo] Loaded
2015-09-29T04:22:07.184Z,1443500527.184 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T04:22:07.199Z,1443500527.199 [ThrusterServo] Loaded
2015-09-29T04:22:07.200Z,1443500527.200 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T04:22:07.200Z,1443500527.200 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T04:22:07.201Z,1443500527.201 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T04:22:07.401Z,1443500527.401 [InternalSim] Loaded
2015-09-29T04:22:07.401Z,1443500527.401 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T04:22:07.402Z,1443500527.402 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T04:22:07.403Z,1443500527.403 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T04:22:07.446Z,1443500527.446 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T04:22:07.450Z,1443500527.450 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T04:22:07.451Z,1443500527.451 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T04:22:07.458Z,1443500527.458 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T04:22:07.459Z,1443500527.459 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T04:22:07.460Z,1443500527.460 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T04:22:07.464Z,1443500527.464 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T04:22:07.465Z,1443500527.465 [Supervisor](DEBUG): Running supervisor.
2015-09-29T04:22:07.465Z,1443500527.465 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T04:22:07.472Z,1443500527.472 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T04:22:07.472Z,1443500527.472 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T04:22:07.473Z,1443500527.473 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T04:22:07.475Z,1443500527.475 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T04:22:07.476Z,1443500527.476 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T04:22:07.477Z,1443500527.477 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T04:22:07.477Z,1443500527.477 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T04:22:07.478Z,1443500527.478 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T04:22:07.479Z,1443500527.479 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T04:22:07.479Z,1443500527.479 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T04:22:07.480Z,1443500527.480 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T04:22:07.481Z,1443500527.481 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T04:22:07.482Z,1443500527.482 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T04:22:07.482Z,1443500527.482 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T04:22:07.482Z,1443500527.482 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T04:22:07.482Z,1443500527.482 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T04:22:07.483Z,1443500527.483 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T04:22:07.483Z,1443500527.483 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T04:22:07.483Z,1443500527.483 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T04:22:07.484Z,1443500527.484 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T04:22:07.485Z,1443500527.485 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T04:22:07.485Z,1443500527.485 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T04:22:07.486Z,1443500527.486 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T04:22:07.486Z,1443500527.486 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T04:22:07.487Z,1443500527.487 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T04:22:07.487Z,1443500527.487 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T04:22:07.487Z,1443500527.487 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T04:22:07.488Z,1443500527.488 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T04:22:07.488Z,1443500527.488 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T04:22:07.493Z,1443500527.493 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T04:22:07.528Z,1443500527.528 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T04:22:07.620Z,1443500527.620 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T04:22:07.628Z,1443500527.628 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T04:22:07.673Z,1443500527.673 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T04:22:07.684Z,1443500527.684 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T04:22:07.701Z,1443500527.701 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T04:22:07.757Z,1443500527.757 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T04:22:07.760Z,1443500527.760 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T04:22:07.760Z,1443500527.760 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T04:22:07.760Z,1443500527.760 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T04:22:07.760Z,1443500527.760 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T04:22:07.761Z,1443500527.761 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T04:22:07.761Z,1443500527.761 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T04:22:07.761Z,1443500527.761 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T04:22:07.761Z,1443500527.761 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T04:22:07.803Z,1443500527.803 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T04:22:07.834Z,1443500527.834 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T04:22:07.835Z,1443500527.835 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T04:22:07.896Z,1443500527.896 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T04:22:07.897Z,1443500527.897 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T04:22:07.951Z,1443500527.951 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T04:22:07.954Z,1443500527.954 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T04:22:07.976Z,1443500527.976 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T04:22:07.979Z,1443500527.979 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T04:22:08.001Z,1443500528.001 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T04:22:08.155Z,1443500528.155 [DVL_micro](INFO): Initializing
2015-09-29T04:22:08.317Z,1443500528.317 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:22:08.344Z,1443500528.344 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:22:08.449Z,1443500528.449 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T04:22:08.456Z,1443500528.456 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T04:22:08.475Z,1443500528.475 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T04:22:08.482Z,1443500528.482 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T04:22:08.495Z,1443500528.495 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T04:22:08.789Z,1443500528.789 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:22:08.790Z,1443500528.790 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:22:17.867Z,1443500537.867 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:18.201Z,1443500538.201 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:18.334Z,1443500538.334 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:18.734Z,1443500538.734 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T04:22:18.738Z,1443500538.738 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:19.142Z,1443500539.142 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:19.535Z,1443500539.535 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:19.933Z,1443500539.933 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:20.333Z,1443500540.333 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:20.732Z,1443500540.732 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:21.132Z,1443500541.132 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:21.532Z,1443500541.532 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:21.940Z,1443500541.940 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:22.332Z,1443500542.332 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:22.733Z,1443500542.733 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:23.132Z,1443500543.132 [NAL9602](INFO): No messages in MT queue
2015-09-29T04:22:23.133Z,1443500543.133 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:23.532Z,1443500543.532 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:23.933Z,1443500543.933 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:24.332Z,1443500544.332 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:24.732Z,1443500544.732 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:25.132Z,1443500545.132 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:25.532Z,1443500545.532 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:25.933Z,1443500545.933 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:26.332Z,1443500546.332 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:26.732Z,1443500546.732 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:27.132Z,1443500547.132 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:27.533Z,1443500547.533 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:28.007Z,1443500548.007 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:28.034Z,1443500548.034 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T04:22:28.332Z,1443500548.332 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:28.732Z,1443500548.732 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:29.132Z,1443500549.132 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:29.561Z,1443500549.561 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:29.932Z,1443500549.932 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:30.337Z,1443500550.337 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:30.732Z,1443500550.732 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:31.132Z,1443500551.132 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:31.532Z,1443500551.532 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:31.932Z,1443500551.932 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:22:32.332Z,1443500552.332 [D