2015-09-29T04:14:04.204Z,1443500044.204 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T04:14:04.206Z,1443500044.206 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T04:14:04.207Z,1443500044.207 [SyncHandler](INFO): Protected caller Thread ID is 762
2015-09-29T04:14:04.207Z,1443500044.207 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T04:14:04.210Z,1443500044.210 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T04:14:04.211Z,1443500044.211 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T04:14:04.214Z,1443500044.214 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T04:14:04.227Z,1443500044.227 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T04:14:04.230Z,1443500044.230 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T04:14:04.231Z,1443500044.231 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T04:14:04.232Z,1443500044.232 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T04:14:04.234Z,1443500044.234 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T04:14:04.235Z,1443500044.235 [logger ThreadHandler](INFO): Protected caller Thread ID is 765
2015-09-29T04:14:04.237Z,1443500044.237 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T04:14:04.237Z,1443500044.237 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T04:14:04.241Z,1443500044.241 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T04:14:04.664Z,1443500044.664 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T04:14:04.666Z,1443500044.666 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T04:14:04.867Z,1443500044.867 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T04:14:04.869Z,1443500044.869 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T04:14:05.015Z,1443500045.015 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T04:14:05.016Z,1443500045.016 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T04:14:05.167Z,1443500045.167 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T04:14:05.168Z,1443500045.168 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T04:14:05.263Z,1443500045.263 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T04:14:05.491Z,1443500045.491 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T04:14:05.492Z,1443500045.492 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T04:14:05.591Z,1443500045.591 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T04:14:05.591Z,1443500045.591 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T04:14:05.915Z,1443500045.915 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T04:14:05.916Z,1443500045.916 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T04:14:06.326Z,1443500046.326 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T04:14:06.326Z,1443500046.326 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T04:14:06.691Z,1443500046.691 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T04:14:06.693Z,1443500046.693 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T04:14:07.312Z,1443500047.312 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T04:14:07.313Z,1443500047.313 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T04:14:07.555Z,1443500047.555 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T04:14:07.556Z,1443500047.556 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T04:14:07.681Z,1443500047.681 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T04:14:07.682Z,1443500047.682 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T04:14:08.224Z,1443500048.224 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T04:14:08.224Z,1443500048.224 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T04:14:08.352Z,1443500048.352 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T04:14:08.354Z,1443500048.354 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T04:14:08.354Z,1443500048.354 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T04:14:08.359Z,1443500048.359 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T04:14:08.433Z,1443500048.433 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T04:14:08.574Z,1443500048.574 [VerticalControl] Loaded
2015-09-29T04:14:08.575Z,1443500048.575 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T04:14:08.576Z,1443500048.576 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T04:14:08.658Z,1443500048.658 [HorizontalControl] Loaded
2015-09-29T04:14:08.658Z,1443500048.658 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T04:14:08.659Z,1443500048.659 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T04:14:08.665Z,1443500048.665 [SpeedControl] Loaded
2015-09-29T04:14:08.665Z,1443500048.665 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T04:14:08.666Z,1443500048.666 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T04:14:08.667Z,1443500048.667 [LoopControl] Loaded
2015-09-29T04:14:08.667Z,1443500048.667 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T04:14:08.668Z,1443500048.668 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T04:14:08.668Z,1443500048.668 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T04:14:08.825Z,1443500048.825 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T04:14:08.842Z,1443500048.842 [SBIT] Loaded
2015-09-29T04:14:08.842Z,1443500048.842 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T04:14:08.843Z,1443500048.843 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T04:14:08.873Z,1443500048.873 [IBIT] Loaded
2015-09-29T04:14:08.874Z,1443500048.874 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T04:14:08.876Z,1443500048.876 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T04:14:09.032Z,1443500049.032 [CBIT] Loaded
2015-09-29T04:14:09.032Z,1443500049.032 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T04:14:09.033Z,1443500049.033 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T04:14:09.033Z,1443500049.033 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T04:14:09.074Z,1443500049.074 [DepthRateCalculator] Loaded
2015-09-29T04:14:09.075Z,1443500049.075 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T04:14:09.080Z,1443500049.080 [PitchRateCalculator] Loaded
2015-09-29T04:14:09.081Z,1443500049.081 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T04:14:09.092Z,1443500049.092 [SpeedCalculator] Loaded
2015-09-29T04:14:09.093Z,1443500049.093 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T04:14:09.115Z,1443500049.115 [TempGradientCalculator] Loaded
2015-09-29T04:14:09.115Z,1443500049.115 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T04:14:09.132Z,1443500049.132 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T04:14:09.133Z,1443500049.133 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T04:14:09.138Z,1443500049.138 [YawRateCalculator] Loaded
2015-09-29T04:14:09.139Z,1443500049.139 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T04:14:09.139Z,1443500049.139 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T04:14:09.140Z,1443500049.140 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T04:14:09.256Z,1443500049.256 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T04:14:09.257Z,1443500049.257 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T04:14:09.257Z,1443500049.257 [StratificationFrontDetector] Loaded
2015-09-29T04:14:09.257Z,1443500049.257 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T04:14:09.258Z,1443500049.258 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T04:14:09.259Z,1443500049.259 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T04:14:09.549Z,1443500049.549 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T04:14:09.549Z,1443500049.549 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T04:14:09.685Z,1443500049.685 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T04:14:09.686Z,1443500049.686 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T04:14:09.747Z,1443500049.747 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T04:14:09.747Z,1443500049.747 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T04:14:09.769Z,1443500049.769 [NavChart] Loaded
2015-09-29T04:14:09.770Z,1443500049.770 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T04:14:09.775Z,1443500049.775 [UniversalFixResidualReporter] Loaded
2015-09-29T04:14:09.775Z,1443500049.775 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T04:14:09.776Z,1443500049.776 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T04:14:09.777Z,1443500049.777 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T04:14:09.785Z,1443500049.785 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T04:14:09.786Z,1443500049.786 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T04:14:10.088Z,1443500050.088 [CTD_NeilBrown] Loaded
2015-09-29T04:14:10.088Z,1443500050.088 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T04:14:10.090Z,1443500050.090 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T04:14:10.091Z,1443500050.091 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T04:14:10.104Z,1443500050.104 [ISUS] Loaded
2015-09-29T04:14:10.104Z,1443500050.104 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T04:14:10.119Z,1443500050.119 [PAR_Licor] Loaded
2015-09-29T04:14:10.119Z,1443500050.119 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T04:14:10.180Z,1443500050.180 [WetLabsBB2FL] Loaded
2015-09-29T04:14:10.180Z,1443500050.180 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T04:14:10.182Z,1443500050.182 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T04:14:10.183Z,1443500050.183 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T04:14:10.183Z,1443500050.183 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T04:14:10.184Z,1443500050.184 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T04:14:10.919Z,1443500050.919 [AHRS_sp3003D] Loaded
2015-09-29T04:14:10.920Z,1443500050.920 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T04:14:11.115Z,1443500051.115 [DataOverHttps] Loaded
2015-09-29T04:14:11.116Z,1443500051.116 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T04:14:11.130Z,1443500051.130 [Depth_Keller] Loaded
2015-09-29T04:14:11.130Z,1443500051.130 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T04:14:11.135Z,1443500051.135 [DropWeight] Loaded
2015-09-29T04:14:11.135Z,1443500051.135 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T04:14:11.292Z,1443500051.292 [DVL_micro] Loaded
2015-09-29T04:14:11.292Z,1443500051.292 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T04:14:11.401Z,1443500051.401 [NAL9602] Loaded
2015-09-29T04:14:11.401Z,1443500051.401 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T04:14:11.449Z,1443500051.449 [Onboard] Loaded
2015-09-29T04:14:11.449Z,1443500051.449 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T04:14:11.461Z,1443500051.461 [Radio_Surface] Loaded
2015-09-29T04:14:11.461Z,1443500051.461 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T04:14:11.462Z,1443500051.462 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T04:14:11.463Z,1443500051.463 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T04:14:11.624Z,1443500051.624 [DAT] Loaded
2015-09-29T04:14:11.624Z,1443500051.624 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T04:14:11.631Z,1443500051.631 [SCPI] Loaded
2015-09-29T04:14:11.631Z,1443500051.631 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T04:14:11.632Z,1443500051.632 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T04:14:11.633Z,1443500051.633 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T04:14:11.766Z,1443500051.766 [BuoyancyServo] Loaded
2015-09-29T04:14:11.767Z,1443500051.767 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T04:14:11.780Z,1443500051.780 [ElevatorServo] Loaded
2015-09-29T04:14:11.780Z,1443500051.780 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T04:14:11.792Z,1443500051.792 [MassServo] Loaded
2015-09-29T04:14:11.793Z,1443500051.793 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T04:14:11.805Z,1443500051.805 [RudderServo] Loaded
2015-09-29T04:14:11.805Z,1443500051.805 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T04:14:11.821Z,1443500051.821 [ThrusterServo] Loaded
2015-09-29T04:14:11.821Z,1443500051.821 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T04:14:11.822Z,1443500051.822 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T04:14:11.823Z,1443500051.823 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T04:14:12.019Z,1443500052.019 [InternalSim] Loaded
2015-09-29T04:14:12.020Z,1443500052.020 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T04:14:12.020Z,1443500052.020 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T04:14:12.021Z,1443500052.021 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T04:14:12.064Z,1443500052.064 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T04:14:12.069Z,1443500052.069 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T04:14:12.070Z,1443500052.070 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T04:14:12.081Z,1443500052.081 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T04:14:12.082Z,1443500052.082 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T04:14:12.083Z,1443500052.083 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 814
2015-09-29T04:14:12.088Z,1443500052.088 [Supervisor](INFO): Main Thread ID is 761
2015-09-29T04:14:12.088Z,1443500052.088 [Supervisor](DEBUG): Running supervisor.
2015-09-29T04:14:12.089Z,1443500052.089 [CommandLine ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T04:14:12.095Z,1443500052.095 [controlThread ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T04:14:12.095Z,1443500052.095 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T04:14:12.096Z,1443500052.096 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T04:14:12.098Z,1443500052.098 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T04:14:12.099Z,1443500052.099 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T04:14:12.099Z,1443500052.099 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T04:14:12.100Z,1443500052.100 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T04:14:12.100Z,1443500052.100 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T04:14:12.102Z,1443500052.102 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T04:14:12.102Z,1443500052.102 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T04:14:12.103Z,1443500052.103 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T04:14:12.103Z,1443500052.103 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T04:14:12.104Z,1443500052.104 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T04:14:12.104Z,1443500052.104 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T04:14:12.105Z,1443500052.105 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T04:14:12.105Z,1443500052.105 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T04:14:12.105Z,1443500052.105 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T04:14:12.106Z,1443500052.106 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T04:14:12.106Z,1443500052.106 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T04:14:12.106Z,1443500052.106 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T04:14:12.107Z,1443500052.107 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T04:14:12.108Z,1443500052.108 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T04:14:12.108Z,1443500052.108 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T04:14:12.109Z,1443500052.109 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T04:14:12.109Z,1443500052.109 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T04:14:12.109Z,1443500052.109 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T04:14:12.110Z,1443500052.110 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T04:14:12.110Z,1443500052.110 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T04:14:12.111Z,1443500052.111 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T04:14:12.115Z,1443500052.115 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T04:14:12.151Z,1443500052.151 [logger ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T04:14:12.200Z,1443500052.200 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T04:14:12.207Z,1443500052.207 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T04:14:12.219Z,1443500052.219 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T04:14:12.299Z,1443500052.299 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 821
2015-09-29T04:14:12.306Z,1443500052.306 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T04:14:12.308Z,1443500052.308 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T04:14:12.308Z,1443500052.308 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T04:14:12.309Z,1443500052.309 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T04:14:12.309Z,1443500052.309 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T04:14:12.309Z,1443500052.309 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T04:14:12.309Z,1443500052.309 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T04:14:12.310Z,1443500052.310 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T04:14:12.310Z,1443500052.310 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T04:14:12.336Z,1443500052.336 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T04:14:12.368Z,1443500052.368 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T04:14:12.420Z,1443500052.420 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T04:14:12.421Z,1443500052.421 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T04:14:12.470Z,1443500052.470 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T04:14:12.471Z,1443500052.471 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T04:14:12.520Z,1443500052.520 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T04:14:12.539Z,1443500052.539 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T04:14:12.545Z,1443500052.545 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T04:14:12.564Z,1443500052.564 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T04:14:12.570Z,1443500052.570 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T04:14:12.815Z,1443500052.815 [DVL_micro](INFO): Initializing
2015-09-29T04:14:12.991Z,1443500052.991 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:14:13.002Z,1443500053.002 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:14:13.102Z,1443500053.102 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T04:14:13.110Z,1443500053.110 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T04:14:13.130Z,1443500053.130 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T04:14:13.136Z,1443500053.136 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T04:14:13.151Z,1443500053.151 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T04:14:13.373Z,1443500053.373 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:14:13.374Z,1443500053.374 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:14:22.482Z,1443500062.482 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:22.810Z,1443500062.810 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:22.958Z,1443500062.958 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:23.357Z,1443500063.357 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T04:14:23.362Z,1443500063.362 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:23.755Z,1443500063.755 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:24.156Z,1443500064.156 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:24.555Z,1443500064.555 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:24.955Z,1443500064.955 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:25.355Z,1443500065.355 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:25.755Z,1443500065.755 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:26.154Z,1443500066.154 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:26.555Z,1443500066.555 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:26.955Z,1443500066.955 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:27.358Z,1443500067.358 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:27.754Z,1443500067.754 [NAL9602](INFO): No messages in MT queue
2015-09-29T04:14:27.770Z,1443500067.770 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:28.161Z,1443500068.161 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:28.557Z,1443500068.557 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:28.959Z,1443500068.959 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:29.355Z,1443500069.355 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:29.755Z,1443500069.755 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:30.155Z,1443500070.155 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:30.556Z,1443500070.556 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:30.955Z,1443500070.955 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:31.355Z,1443500071.355 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:31.755Z,1443500071.755 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:32.156Z,1443500072.156 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:32.555Z,1443500072.555 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:32.590Z,1443500072.590 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T04:14:32.955Z,1443500072.955 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:33.355Z,1443500073.355 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:33.755Z,1443500073.755 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:34.155Z,1443500074.155 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:34.555Z,1443500074.555 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:34.955Z,1443500074.955 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:35.355Z,1443500075.355 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:35.755Z,1443500075.755 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:36.155Z,1443500076.155 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:36.555Z,1443500076.555 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:14:36.955Z,1443500076.955 [D