2015-09-29T04:06:09.359Z,1443499569.359 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T04:06:09.362Z,1443499569.362 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T04:06:09.362Z,1443499569.362 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T04:06:09.363Z,1443499569.363 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T04:06:09.365Z,1443499569.365 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T04:06:09.365Z,1443499569.365 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T04:06:09.368Z,1443499569.368 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T04:06:09.380Z,1443499569.380 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T04:06:09.385Z,1443499569.385 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T04:06:09.385Z,1443499569.385 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T04:06:09.386Z,1443499569.386 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T04:06:09.389Z,1443499569.389 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T04:06:09.389Z,1443499569.389 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T04:06:09.391Z,1443499569.391 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T04:06:09.392Z,1443499569.392 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T04:06:09.395Z,1443499569.395 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T04:06:09.790Z,1443499569.790 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T04:06:09.792Z,1443499569.792 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T04:06:09.985Z,1443499569.985 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T04:06:09.987Z,1443499569.987 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T04:06:10.130Z,1443499570.130 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T04:06:10.130Z,1443499570.130 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T04:06:10.278Z,1443499570.278 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T04:06:10.278Z,1443499570.278 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T04:06:10.373Z,1443499570.373 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T04:06:10.593Z,1443499570.593 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T04:06:10.594Z,1443499570.594 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T04:06:10.689Z,1443499570.689 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T04:06:10.690Z,1443499570.690 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T04:06:11.002Z,1443499571.002 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T04:06:11.003Z,1443499571.003 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T04:06:11.402Z,1443499571.402 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T04:06:11.403Z,1443499571.403 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T04:06:11.754Z,1443499571.754 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T04:06:11.756Z,1443499571.756 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T04:06:12.350Z,1443499572.350 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T04:06:12.351Z,1443499572.351 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T04:06:12.583Z,1443499572.583 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T04:06:12.583Z,1443499572.583 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T04:06:12.700Z,1443499572.700 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T04:06:12.701Z,1443499572.701 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T04:06:13.217Z,1443499573.217 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T04:06:13.218Z,1443499573.218 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T04:06:13.385Z,1443499573.385 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T04:06:13.387Z,1443499573.387 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T04:06:13.388Z,1443499573.388 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T04:06:13.392Z,1443499573.392 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T04:06:13.467Z,1443499573.467 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T04:06:13.600Z,1443499573.600 [VerticalControl] Loaded
2015-09-29T04:06:13.600Z,1443499573.600 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T04:06:13.601Z,1443499573.601 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T04:06:13.681Z,1443499573.681 [HorizontalControl] Loaded
2015-09-29T04:06:13.682Z,1443499573.682 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T04:06:13.682Z,1443499573.682 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T04:06:13.688Z,1443499573.688 [SpeedControl] Loaded
2015-09-29T04:06:13.689Z,1443499573.689 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T04:06:13.689Z,1443499573.689 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T04:06:13.690Z,1443499573.690 [LoopControl] Loaded
2015-09-29T04:06:13.690Z,1443499573.690 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T04:06:13.691Z,1443499573.691 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T04:06:13.691Z,1443499573.691 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T04:06:13.849Z,1443499573.849 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T04:06:13.865Z,1443499573.865 [SBIT] Loaded
2015-09-29T04:06:13.865Z,1443499573.865 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T04:06:13.866Z,1443499573.866 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T04:06:13.896Z,1443499573.896 [IBIT] Loaded
2015-09-29T04:06:13.896Z,1443499573.896 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T04:06:13.898Z,1443499573.898 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T04:06:14.053Z,1443499574.053 [CBIT] Loaded
2015-09-29T04:06:14.053Z,1443499574.053 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T04:06:14.053Z,1443499574.053 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T04:06:14.054Z,1443499574.054 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T04:06:14.099Z,1443499574.099 [DepthRateCalculator] Loaded
2015-09-29T04:06:14.100Z,1443499574.100 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T04:06:14.105Z,1443499574.105 [PitchRateCalculator] Loaded
2015-09-29T04:06:14.105Z,1443499574.105 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T04:06:14.117Z,1443499574.117 [SpeedCalculator] Loaded
2015-09-29T04:06:14.117Z,1443499574.117 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T04:06:14.138Z,1443499574.138 [TempGradientCalculator] Loaded
2015-09-29T04:06:14.138Z,1443499574.138 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T04:06:14.155Z,1443499574.155 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T04:06:14.156Z,1443499574.156 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T04:06:14.161Z,1443499574.161 [YawRateCalculator] Loaded
2015-09-29T04:06:14.161Z,1443499574.161 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T04:06:14.162Z,1443499574.162 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T04:06:14.162Z,1443499574.162 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T04:06:14.286Z,1443499574.286 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T04:06:14.286Z,1443499574.286 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T04:06:14.287Z,1443499574.287 [StratificationFrontDetector] Loaded
2015-09-29T04:06:14.287Z,1443499574.287 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T04:06:14.287Z,1443499574.287 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T04:06:14.288Z,1443499574.288 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T04:06:14.580Z,1443499574.580 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T04:06:14.580Z,1443499574.580 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T04:06:14.713Z,1443499574.713 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T04:06:14.713Z,1443499574.713 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T04:06:14.774Z,1443499574.774 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T04:06:14.774Z,1443499574.774 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T04:06:14.795Z,1443499574.795 [NavChart] Loaded
2015-09-29T04:06:14.796Z,1443499574.796 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T04:06:14.801Z,1443499574.801 [UniversalFixResidualReporter] Loaded
2015-09-29T04:06:14.801Z,1443499574.801 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T04:06:14.802Z,1443499574.802 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T04:06:14.802Z,1443499574.802 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T04:06:14.811Z,1443499574.811 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T04:06:14.812Z,1443499574.812 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T04:06:15.110Z,1443499575.110 [CTD_NeilBrown] Loaded
2015-09-29T04:06:15.110Z,1443499575.110 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T04:06:15.113Z,1443499575.113 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T04:06:15.113Z,1443499575.113 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T04:06:15.126Z,1443499575.126 [ISUS] Loaded
2015-09-29T04:06:15.126Z,1443499575.126 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T04:06:15.141Z,1443499575.141 [PAR_Licor] Loaded
2015-09-29T04:06:15.141Z,1443499575.141 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T04:06:15.201Z,1443499575.201 [WetLabsBB2FL] Loaded
2015-09-29T04:06:15.201Z,1443499575.201 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T04:06:15.205Z,1443499575.205 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T04:06:15.205Z,1443499575.205 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T04:06:15.206Z,1443499575.206 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T04:06:15.206Z,1443499575.206 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T04:06:15.924Z,1443499575.924 [AHRS_sp3003D] Loaded
2015-09-29T04:06:15.925Z,1443499575.925 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T04:06:16.119Z,1443499576.119 [DataOverHttps] Loaded
2015-09-29T04:06:16.119Z,1443499576.119 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T04:06:16.133Z,1443499576.133 [Depth_Keller] Loaded
2015-09-29T04:06:16.133Z,1443499576.133 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T04:06:16.138Z,1443499576.138 [DropWeight] Loaded
2015-09-29T04:06:16.138Z,1443499576.138 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T04:06:16.295Z,1443499576.295 [DVL_micro] Loaded
2015-09-29T04:06:16.295Z,1443499576.295 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T04:06:16.403Z,1443499576.403 [NAL9602] Loaded
2015-09-29T04:06:16.403Z,1443499576.403 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T04:06:16.450Z,1443499576.450 [Onboard] Loaded
2015-09-29T04:06:16.451Z,1443499576.451 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T04:06:16.462Z,1443499576.462 [Radio_Surface] Loaded
2015-09-29T04:06:16.462Z,1443499576.462 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T04:06:16.465Z,1443499576.465 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T04:06:16.465Z,1443499576.465 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T04:06:16.620Z,1443499576.620 [DAT] Loaded
2015-09-29T04:06:16.620Z,1443499576.620 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T04:06:16.631Z,1443499576.631 [SCPI] Loaded
2015-09-29T04:06:16.632Z,1443499576.632 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T04:06:16.632Z,1443499576.632 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T04:06:16.633Z,1443499576.633 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T04:06:16.762Z,1443499576.762 [BuoyancyServo] Loaded
2015-09-29T04:06:16.763Z,1443499576.763 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T04:06:16.780Z,1443499576.780 [ElevatorServo] Loaded
2015-09-29T04:06:16.780Z,1443499576.780 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T04:06:16.792Z,1443499576.792 [MassServo] Loaded
2015-09-29T04:06:16.792Z,1443499576.792 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T04:06:16.804Z,1443499576.804 [RudderServo] Loaded
2015-09-29T04:06:16.804Z,1443499576.804 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T04:06:16.819Z,1443499576.819 [ThrusterServo] Loaded
2015-09-29T04:06:16.820Z,1443499576.820 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T04:06:16.820Z,1443499576.820 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T04:06:16.821Z,1443499576.821 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T04:06:17.021Z,1443499577.021 [InternalSim] Loaded
2015-09-29T04:06:17.021Z,1443499577.021 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T04:06:17.022Z,1443499577.022 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T04:06:17.023Z,1443499577.023 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T04:06:17.062Z,1443499577.062 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T04:06:17.070Z,1443499577.070 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T04:06:17.071Z,1443499577.071 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T04:06:17.078Z,1443499577.078 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T04:06:17.081Z,1443499577.081 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T04:06:17.081Z,1443499577.081 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T04:06:17.086Z,1443499577.086 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T04:06:17.086Z,1443499577.086 [Supervisor](DEBUG): Running supervisor.
2015-09-29T04:06:17.087Z,1443499577.087 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T04:06:17.093Z,1443499577.093 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T04:06:17.094Z,1443499577.094 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T04:06:17.095Z,1443499577.095 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T04:06:17.096Z,1443499577.096 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T04:06:17.097Z,1443499577.097 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T04:06:17.098Z,1443499577.098 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T04:06:17.098Z,1443499577.098 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T04:06:17.099Z,1443499577.099 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T04:06:17.100Z,1443499577.100 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T04:06:17.100Z,1443499577.100 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T04:06:17.101Z,1443499577.101 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T04:06:17.102Z,1443499577.102 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T04:06:17.103Z,1443499577.103 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T04:06:17.103Z,1443499577.103 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T04:06:17.103Z,1443499577.103 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T04:06:17.103Z,1443499577.103 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T04:06:17.104Z,1443499577.104 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T04:06:17.104Z,1443499577.104 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T04:06:17.104Z,1443499577.104 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T04:06:17.105Z,1443499577.105 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T04:06:17.106Z,1443499577.106 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T04:06:17.106Z,1443499577.106 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T04:06:17.107Z,1443499577.107 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T04:06:17.107Z,1443499577.107 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T04:06:17.108Z,1443499577.108 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T04:06:17.108Z,1443499577.108 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T04:06:17.108Z,1443499577.108 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T04:06:17.109Z,1443499577.109 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T04:06:17.109Z,1443499577.109 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T04:06:17.114Z,1443499577.114 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T04:06:17.149Z,1443499577.149 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T04:06:17.249Z,1443499577.249 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T04:06:17.251Z,1443499577.251 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T04:06:17.317Z,1443499577.317 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T04:06:17.329Z,1443499577.329 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T04:06:17.342Z,1443499577.342 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T04:06:17.360Z,1443499577.360 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T04:06:17.362Z,1443499577.362 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T04:06:17.362Z,1443499577.362 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T04:06:17.362Z,1443499577.362 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T04:06:17.363Z,1443499577.363 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T04:06:17.363Z,1443499577.363 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T04:06:17.363Z,1443499577.363 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T04:06:17.363Z,1443499577.363 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T04:06:17.364Z,1443499577.364 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T04:06:17.400Z,1443499577.400 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T04:06:17.438Z,1443499577.438 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T04:06:17.439Z,1443499577.439 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T04:06:17.514Z,1443499577.514 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T04:06:17.515Z,1443499577.515 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T04:06:17.561Z,1443499577.561 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T04:06:17.564Z,1443499577.564 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T04:06:17.578Z,1443499577.578 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T04:06:17.597Z,1443499577.597 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T04:06:17.604Z,1443499577.604 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T04:06:17.885Z,1443499577.885 [DVL_micro](INFO): Initializing
2015-09-29T04:06:18.053Z,1443499578.053 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:06:18.060Z,1443499578.060 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:06:18.185Z,1443499578.185 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T04:06:18.203Z,1443499578.203 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T04:06:18.233Z,1443499578.233 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T04:06:18.238Z,1443499578.238 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T04:06:18.261Z,1443499578.261 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T04:06:18.504Z,1443499578.504 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:06:18.513Z,1443499578.513 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T04:06:27.679Z,1443499587.679 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:28.008Z,1443499588.008 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:28.152Z,1443499588.152 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:28.552Z,1443499588.552 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T04:06:28.556Z,1443499588.556 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:28.950Z,1443499588.950 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:29.350Z,1443499589.350 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:29.750Z,1443499589.750 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:30.150Z,1443499590.150 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:30.549Z,1443499590.549 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:30.950Z,1443499590.950 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:31.349Z,1443499591.349 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:31.750Z,1443499591.750 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:32.150Z,1443499592.150 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:32.550Z,1443499592.550 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:32.948Z,1443499592.948 [NAL9602](INFO): No messages in MT queue
2015-09-29T04:06:32.949Z,1443499592.949 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:33.349Z,1443499593.349 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:33.749Z,1443499593.749 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:34.150Z,1443499594.150 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:34.549Z,1443499594.549 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:34.950Z,1443499594.950 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:35.350Z,1443499595.350 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:35.750Z,1443499595.750 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:36.150Z,1443499596.150 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:36.550Z,1443499596.550 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:36.949Z,1443499596.949 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:37.350Z,1443499597.350 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:37.750Z,1443499597.750 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:37.783Z,1443499597.783 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T04:06:38.151Z,1443499598.151 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:38.549Z,1443499598.549 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:38.950Z,1443499598.950 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:39.350Z,1443499599.350 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:39.749Z,1443499599.749 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:40.150Z,1443499600.150 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:40.549Z,1443499600.549 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:40.950Z,1443499600.950 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:41.350Z,1443499601.350 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:41.750Z,1443499601.750 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T04:06:42.151Z,1443499602.151 [D