2015-09-29T03:58:15.470Z,1443499095.470 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T03:58:15.474Z,1443499095.474 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T03:58:15.474Z,1443499095.474 [SyncHandler](INFO): Protected caller Thread ID is 762
2015-09-29T03:58:15.475Z,1443499095.475 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T03:58:15.477Z,1443499095.477 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T03:58:15.478Z,1443499095.478 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T03:58:15.481Z,1443499095.481 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T03:58:15.493Z,1443499095.493 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T03:58:15.497Z,1443499095.497 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T03:58:15.498Z,1443499095.498 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T03:58:15.499Z,1443499095.499 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T03:58:15.501Z,1443499095.501 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T03:58:15.502Z,1443499095.502 [logger ThreadHandler](INFO): Protected caller Thread ID is 765
2015-09-29T03:58:15.504Z,1443499095.504 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T03:58:15.504Z,1443499095.504 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T03:58:15.508Z,1443499095.508 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T03:58:15.919Z,1443499095.919 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T03:58:15.921Z,1443499095.921 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T03:58:16.122Z,1443499096.122 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T03:58:16.124Z,1443499096.124 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T03:58:16.273Z,1443499096.273 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T03:58:16.274Z,1443499096.274 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T03:58:16.426Z,1443499096.426 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T03:58:16.427Z,1443499096.427 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T03:58:16.523Z,1443499096.523 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T03:58:16.750Z,1443499096.750 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T03:58:16.751Z,1443499096.751 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T03:58:16.850Z,1443499096.850 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T03:58:16.851Z,1443499096.851 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T03:58:17.175Z,1443499097.175 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T03:58:17.175Z,1443499097.175 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T03:58:17.592Z,1443499097.592 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T03:58:17.592Z,1443499097.592 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T03:58:17.956Z,1443499097.956 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T03:58:17.958Z,1443499097.958 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T03:58:18.577Z,1443499098.577 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T03:58:18.578Z,1443499098.578 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T03:58:18.823Z,1443499098.823 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T03:58:18.824Z,1443499098.824 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T03:58:18.941Z,1443499098.941 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T03:58:18.941Z,1443499098.941 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T03:58:19.527Z,1443499099.527 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T03:58:19.528Z,1443499099.528 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T03:58:19.656Z,1443499099.656 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T03:58:19.658Z,1443499099.658 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T03:58:19.658Z,1443499099.658 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T03:58:19.663Z,1443499099.663 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T03:58:19.739Z,1443499099.739 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T03:58:19.885Z,1443499099.885 [VerticalControl] Loaded
2015-09-29T03:58:19.885Z,1443499099.885 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T03:58:19.886Z,1443499099.886 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T03:58:19.971Z,1443499099.971 [HorizontalControl] Loaded
2015-09-29T03:58:19.972Z,1443499099.972 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T03:58:19.972Z,1443499099.972 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T03:58:19.979Z,1443499099.979 [SpeedControl] Loaded
2015-09-29T03:58:19.979Z,1443499099.979 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T03:58:19.980Z,1443499099.980 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T03:58:19.980Z,1443499099.980 [LoopControl] Loaded
2015-09-29T03:58:19.980Z,1443499099.980 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T03:58:19.981Z,1443499099.981 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T03:58:19.982Z,1443499099.982 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T03:58:20.146Z,1443499100.146 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T03:58:20.159Z,1443499100.159 [SBIT] Loaded
2015-09-29T03:58:20.160Z,1443499100.160 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T03:58:20.160Z,1443499100.160 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T03:58:20.196Z,1443499100.196 [IBIT] Loaded
2015-09-29T03:58:20.196Z,1443499100.196 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T03:58:20.198Z,1443499100.198 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T03:58:20.362Z,1443499100.362 [CBIT] Loaded
2015-09-29T03:58:20.362Z,1443499100.362 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T03:58:20.362Z,1443499100.362 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T03:58:20.363Z,1443499100.363 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T03:58:20.405Z,1443499100.405 [DepthRateCalculator] Loaded
2015-09-29T03:58:20.405Z,1443499100.405 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T03:58:20.411Z,1443499100.411 [PitchRateCalculator] Loaded
2015-09-29T03:58:20.411Z,1443499100.411 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T03:58:20.424Z,1443499100.424 [SpeedCalculator] Loaded
2015-09-29T03:58:20.424Z,1443499100.424 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T03:58:20.446Z,1443499100.446 [TempGradientCalculator] Loaded
2015-09-29T03:58:20.447Z,1443499100.447 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T03:58:20.465Z,1443499100.465 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T03:58:20.465Z,1443499100.465 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T03:58:20.471Z,1443499100.471 [YawRateCalculator] Loaded
2015-09-29T03:58:20.471Z,1443499100.471 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T03:58:20.471Z,1443499100.471 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T03:58:20.472Z,1443499100.472 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T03:58:20.599Z,1443499100.599 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T03:58:20.599Z,1443499100.599 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T03:58:20.599Z,1443499100.599 [StratificationFrontDetector] Loaded
2015-09-29T03:58:20.599Z,1443499100.599 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T03:58:20.600Z,1443499100.600 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T03:58:20.601Z,1443499100.601 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T03:58:20.908Z,1443499100.908 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T03:58:20.908Z,1443499100.908 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T03:58:21.047Z,1443499101.047 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T03:58:21.047Z,1443499101.047 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T03:58:21.111Z,1443499101.111 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T03:58:21.111Z,1443499101.111 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T03:58:21.134Z,1443499101.134 [NavChart] Loaded
2015-09-29T03:58:21.134Z,1443499101.134 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T03:58:21.140Z,1443499101.140 [UniversalFixResidualReporter] Loaded
2015-09-29T03:58:21.140Z,1443499101.140 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T03:58:21.140Z,1443499101.140 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T03:58:21.141Z,1443499101.141 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T03:58:21.150Z,1443499101.150 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T03:58:21.150Z,1443499101.150 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T03:58:21.463Z,1443499101.463 [CTD_NeilBrown] Loaded
2015-09-29T03:58:21.464Z,1443499101.464 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T03:58:21.465Z,1443499101.465 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T03:58:21.466Z,1443499101.466 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T03:58:21.479Z,1443499101.479 [ISUS] Loaded
2015-09-29T03:58:21.480Z,1443499101.480 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T03:58:21.499Z,1443499101.499 [PAR_Licor] Loaded
2015-09-29T03:58:21.500Z,1443499101.500 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T03:58:21.559Z,1443499101.559 [WetLabsBB2FL] Loaded
2015-09-29T03:58:21.559Z,1443499101.559 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T03:58:21.561Z,1443499101.561 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T03:58:21.562Z,1443499101.562 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T03:58:21.562Z,1443499101.562 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T03:58:21.563Z,1443499101.563 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T03:58:22.308Z,1443499102.308 [AHRS_sp3003D] Loaded
2015-09-29T03:58:22.309Z,1443499102.309 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T03:58:22.503Z,1443499102.503 [DataOverHttps] Loaded
2015-09-29T03:58:22.504Z,1443499102.504 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T03:58:22.522Z,1443499102.522 [Depth_Keller] Loaded
2015-09-29T03:58:22.522Z,1443499102.522 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T03:58:22.528Z,1443499102.528 [DropWeight] Loaded
2015-09-29T03:58:22.528Z,1443499102.528 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T03:58:22.692Z,1443499102.692 [DVL_micro] Loaded
2015-09-29T03:58:22.692Z,1443499102.692 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T03:58:22.806Z,1443499102.806 [NAL9602] Loaded
2015-09-29T03:58:22.806Z,1443499102.806 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T03:58:22.856Z,1443499102.856 [Onboard] Loaded
2015-09-29T03:58:22.856Z,1443499102.856 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T03:58:22.869Z,1443499102.869 [Radio_Surface] Loaded
2015-09-29T03:58:22.869Z,1443499102.869 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T03:58:22.873Z,1443499102.873 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T03:58:22.874Z,1443499102.874 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T03:58:23.043Z,1443499103.043 [DAT] Loaded
2015-09-29T03:58:23.043Z,1443499103.043 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T03:58:23.050Z,1443499103.050 [SCPI] Loaded
2015-09-29T03:58:23.050Z,1443499103.050 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T03:58:23.051Z,1443499103.051 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T03:58:23.052Z,1443499103.052 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T03:58:23.191Z,1443499103.191 [BuoyancyServo] Loaded
2015-09-29T03:58:23.192Z,1443499103.192 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T03:58:23.205Z,1443499103.205 [ElevatorServo] Loaded
2015-09-29T03:58:23.206Z,1443499103.206 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T03:58:23.222Z,1443499103.222 [MassServo] Loaded
2015-09-29T03:58:23.223Z,1443499103.223 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T03:58:23.235Z,1443499103.235 [RudderServo] Loaded
2015-09-29T03:58:23.236Z,1443499103.236 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T03:58:23.248Z,1443499103.248 [ThrusterServo] Loaded
2015-09-29T03:58:23.248Z,1443499103.248 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T03:58:23.248Z,1443499103.248 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T03:58:23.249Z,1443499103.249 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T03:58:23.456Z,1443499103.456 [InternalSim] Loaded
2015-09-29T03:58:23.456Z,1443499103.456 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T03:58:23.457Z,1443499103.457 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T03:58:23.457Z,1443499103.457 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T03:58:23.501Z,1443499103.501 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T03:58:23.506Z,1443499103.506 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T03:58:23.507Z,1443499103.507 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T03:58:23.513Z,1443499103.513 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T03:58:23.517Z,1443499103.517 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T03:58:23.518Z,1443499103.518 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 814
2015-09-29T03:58:23.523Z,1443499103.523 [Supervisor](INFO): Main Thread ID is 761
2015-09-29T03:58:23.523Z,1443499103.523 [Supervisor](DEBUG): Running supervisor.
2015-09-29T03:58:23.524Z,1443499103.524 [CommandLine ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T03:58:23.530Z,1443499103.530 [controlThread ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T03:58:23.530Z,1443499103.530 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T03:58:23.531Z,1443499103.531 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T03:58:23.533Z,1443499103.533 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T03:58:23.534Z,1443499103.534 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T03:58:23.534Z,1443499103.534 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T03:58:23.535Z,1443499103.535 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T03:58:23.535Z,1443499103.535 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T03:58:23.537Z,1443499103.537 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T03:58:23.537Z,1443499103.537 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T03:58:23.538Z,1443499103.538 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T03:58:23.539Z,1443499103.539 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T03:58:23.539Z,1443499103.539 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T03:58:23.540Z,1443499103.540 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T03:58:23.540Z,1443499103.540 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T03:58:23.540Z,1443499103.540 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T03:58:23.540Z,1443499103.540 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T03:58:23.541Z,1443499103.541 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T03:58:23.541Z,1443499103.541 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T03:58:23.542Z,1443499103.542 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T03:58:23.542Z,1443499103.542 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T03:58:23.543Z,1443499103.543 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T03:58:23.543Z,1443499103.543 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T03:58:23.544Z,1443499103.544 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T03:58:23.544Z,1443499103.544 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T03:58:23.545Z,1443499103.545 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T03:58:23.545Z,1443499103.545 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T03:58:23.545Z,1443499103.545 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T03:58:23.546Z,1443499103.546 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T03:58:23.551Z,1443499103.551 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T03:58:23.582Z,1443499103.582 [logger ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T03:58:23.674Z,1443499103.674 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T03:58:23.682Z,1443499103.682 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T03:58:23.749Z,1443499103.749 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T03:58:23.765Z,1443499103.765 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 821
2015-09-29T03:58:23.772Z,1443499103.772 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T03:58:23.774Z,1443499103.774 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T03:58:23.774Z,1443499103.774 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T03:58:23.775Z,1443499103.775 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T03:58:23.775Z,1443499103.775 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T03:58:23.775Z,1443499103.775 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T03:58:23.775Z,1443499103.775 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T03:58:23.776Z,1443499103.776 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T03:58:23.776Z,1443499103.776 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T03:58:23.802Z,1443499103.802 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T03:58:23.845Z,1443499103.845 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T03:58:23.892Z,1443499103.892 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T03:58:23.892Z,1443499103.892 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T03:58:23.952Z,1443499103.952 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T03:58:23.954Z,1443499103.954 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T03:58:23.984Z,1443499103.984 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T03:58:24.015Z,1443499104.015 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T03:58:24.030Z,1443499104.030 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T03:58:24.046Z,1443499104.046 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T03:58:24.053Z,1443499104.053 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T03:58:24.248Z,1443499104.248 [DVL_micro](INFO): Initializing
2015-09-29T03:58:24.406Z,1443499104.406 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:58:24.415Z,1443499104.415 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:58:24.532Z,1443499104.532 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T03:58:24.554Z,1443499104.554 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T03:58:24.570Z,1443499104.570 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T03:58:24.582Z,1443499104.582 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T03:58:24.594Z,1443499104.594 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T03:58:24.846Z,1443499104.846 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:58:24.847Z,1443499104.847 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:58:33.989Z,1443499113.989 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:34.340Z,1443499114.340 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:34.472Z,1443499114.472 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:34.864Z,1443499114.864 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T03:58:34.868Z,1443499114.868 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:35.263Z,1443499115.263 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:35.663Z,1443499115.663 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:36.063Z,1443499116.063 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:36.462Z,1443499116.462 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:36.863Z,1443499116.863 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:37.263Z,1443499117.263 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:37.662Z,1443499117.662 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:38.070Z,1443499118.070 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:38.462Z,1443499118.462 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:38.863Z,1443499118.863 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:39.262Z,1443499119.262 [NAL9602](INFO): No messages in MT queue
2015-09-29T03:58:39.263Z,1443499119.263 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:39.663Z,1443499119.663 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:40.062Z,1443499120.062 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:40.462Z,1443499120.462 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:40.864Z,1443499120.864 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:41.262Z,1443499121.262 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:41.662Z,1443499121.662 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:42.062Z,1443499122.062 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:42.466Z,1443499122.466 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:42.864Z,1443499122.864 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:43.263Z,1443499123.263 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:43.662Z,1443499123.662 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:44.062Z,1443499124.062 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:44.102Z,1443499124.102 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T03:58:44.462Z,1443499124.462 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:44.863Z,1443499124.863 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:45.262Z,1443499125.262 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:45.663Z,1443499125.663 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:46.063Z,1443499126.063 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:46.462Z,1443499126.462 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:46.863Z,1443499126.863 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:47.262Z,1443499127.262 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:47.662Z,1443499127.662 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:48.063Z,1443499128.063 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:58:48.463Z,1443499128.463 [D