2015-09-29T03:50:22.289Z,1443498622.289 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T03:50:22.292Z,1443498622.292 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T03:50:22.293Z,1443498622.293 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T03:50:22.293Z,1443498622.293 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T03:50:22.296Z,1443498622.296 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T03:50:22.296Z,1443498622.296 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T03:50:22.299Z,1443498622.299 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T03:50:22.311Z,1443498622.311 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T03:50:22.316Z,1443498622.316 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T03:50:22.316Z,1443498622.316 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T03:50:22.317Z,1443498622.317 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T03:50:22.320Z,1443498622.320 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T03:50:22.320Z,1443498622.320 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T03:50:22.322Z,1443498622.322 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T03:50:22.323Z,1443498622.323 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T03:50:22.327Z,1443498622.327 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T03:50:22.727Z,1443498622.727 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T03:50:22.729Z,1443498622.729 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T03:50:22.921Z,1443498622.921 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T03:50:22.923Z,1443498622.923 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T03:50:23.069Z,1443498623.069 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T03:50:23.069Z,1443498623.069 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T03:50:23.217Z,1443498623.217 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T03:50:23.217Z,1443498623.217 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T03:50:23.312Z,1443498623.312 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T03:50:23.533Z,1443498623.533 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T03:50:23.534Z,1443498623.534 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T03:50:23.628Z,1443498623.628 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T03:50:23.629Z,1443498623.629 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T03:50:23.949Z,1443498623.949 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T03:50:23.950Z,1443498623.950 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T03:50:24.353Z,1443498624.353 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T03:50:24.354Z,1443498624.354 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T03:50:24.713Z,1443498624.713 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T03:50:24.715Z,1443498624.715 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T03:50:25.313Z,1443498625.313 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T03:50:25.314Z,1443498625.314 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T03:50:25.549Z,1443498625.549 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T03:50:25.550Z,1443498625.550 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T03:50:25.673Z,1443498625.673 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T03:50:25.673Z,1443498625.673 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T03:50:26.197Z,1443498626.197 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T03:50:26.198Z,1443498626.198 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T03:50:26.365Z,1443498626.365 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T03:50:26.367Z,1443498626.367 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T03:50:26.367Z,1443498626.367 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T03:50:26.372Z,1443498626.372 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T03:50:26.445Z,1443498626.445 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T03:50:26.579Z,1443498626.579 [VerticalControl] Loaded
2015-09-29T03:50:26.579Z,1443498626.579 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T03:50:26.580Z,1443498626.580 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T03:50:26.660Z,1443498626.660 [HorizontalControl] Loaded
2015-09-29T03:50:26.660Z,1443498626.660 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T03:50:26.661Z,1443498626.661 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T03:50:26.667Z,1443498626.667 [SpeedControl] Loaded
2015-09-29T03:50:26.667Z,1443498626.667 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T03:50:26.668Z,1443498626.668 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T03:50:26.668Z,1443498626.668 [LoopControl] Loaded
2015-09-29T03:50:26.669Z,1443498626.669 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T03:50:26.669Z,1443498626.669 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T03:50:26.670Z,1443498626.670 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T03:50:26.829Z,1443498626.829 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T03:50:26.845Z,1443498626.845 [SBIT] Loaded
2015-09-29T03:50:26.845Z,1443498626.845 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T03:50:26.846Z,1443498626.846 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T03:50:26.876Z,1443498626.876 [IBIT] Loaded
2015-09-29T03:50:26.876Z,1443498626.876 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T03:50:26.879Z,1443498626.879 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T03:50:27.033Z,1443498627.033 [CBIT] Loaded
2015-09-29T03:50:27.033Z,1443498627.033 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T03:50:27.033Z,1443498627.033 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T03:50:27.034Z,1443498627.034 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T03:50:27.075Z,1443498627.075 [DepthRateCalculator] Loaded
2015-09-29T03:50:27.076Z,1443498627.076 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T03:50:27.081Z,1443498627.081 [PitchRateCalculator] Loaded
2015-09-29T03:50:27.082Z,1443498627.082 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T03:50:27.093Z,1443498627.093 [SpeedCalculator] Loaded
2015-09-29T03:50:27.093Z,1443498627.093 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T03:50:27.114Z,1443498627.114 [TempGradientCalculator] Loaded
2015-09-29T03:50:27.115Z,1443498627.115 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T03:50:27.132Z,1443498627.132 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T03:50:27.132Z,1443498627.132 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T03:50:27.137Z,1443498627.137 [YawRateCalculator] Loaded
2015-09-29T03:50:27.138Z,1443498627.138 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T03:50:27.138Z,1443498627.138 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T03:50:27.139Z,1443498627.139 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T03:50:27.258Z,1443498627.258 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T03:50:27.258Z,1443498627.258 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T03:50:27.258Z,1443498627.258 [StratificationFrontDetector] Loaded
2015-09-29T03:50:27.258Z,1443498627.258 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T03:50:27.259Z,1443498627.259 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T03:50:27.259Z,1443498627.259 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T03:50:27.552Z,1443498627.552 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T03:50:27.552Z,1443498627.552 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T03:50:27.685Z,1443498627.685 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T03:50:27.685Z,1443498627.685 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T03:50:27.749Z,1443498627.749 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T03:50:27.750Z,1443498627.750 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T03:50:27.767Z,1443498627.767 [NavChart] Loaded
2015-09-29T03:50:27.768Z,1443498627.768 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T03:50:27.773Z,1443498627.773 [UniversalFixResidualReporter] Loaded
2015-09-29T03:50:27.773Z,1443498627.773 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T03:50:27.774Z,1443498627.774 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T03:50:27.774Z,1443498627.774 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T03:50:27.783Z,1443498627.783 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T03:50:27.783Z,1443498627.783 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T03:50:28.085Z,1443498628.085 [CTD_NeilBrown] Loaded
2015-09-29T03:50:28.085Z,1443498628.085 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T03:50:28.088Z,1443498628.088 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T03:50:28.088Z,1443498628.088 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T03:50:28.101Z,1443498628.101 [ISUS] Loaded
2015-09-29T03:50:28.101Z,1443498628.101 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T03:50:28.120Z,1443498628.120 [PAR_Licor] Loaded
2015-09-29T03:50:28.120Z,1443498628.120 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T03:50:28.176Z,1443498628.176 [WetLabsBB2FL] Loaded
2015-09-29T03:50:28.176Z,1443498628.176 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T03:50:28.180Z,1443498628.180 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T03:50:28.180Z,1443498628.180 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T03:50:28.181Z,1443498628.181 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T03:50:28.182Z,1443498628.182 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T03:50:28.906Z,1443498628.906 [AHRS_sp3003D] Loaded
2015-09-29T03:50:28.906Z,1443498628.906 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T03:50:29.101Z,1443498629.101 [DataOverHttps] Loaded
2015-09-29T03:50:29.101Z,1443498629.101 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T03:50:29.114Z,1443498629.114 [Depth_Keller] Loaded
2015-09-29T03:50:29.115Z,1443498629.115 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T03:50:29.124Z,1443498629.124 [DropWeight] Loaded
2015-09-29T03:50:29.124Z,1443498629.124 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T03:50:29.275Z,1443498629.275 [DVL_micro] Loaded
2015-09-29T03:50:29.276Z,1443498629.276 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T03:50:29.383Z,1443498629.383 [NAL9602] Loaded
2015-09-29T03:50:29.384Z,1443498629.384 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T03:50:29.431Z,1443498629.431 [Onboard] Loaded
2015-09-29T03:50:29.431Z,1443498629.431 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T03:50:29.443Z,1443498629.443 [Radio_Surface] Loaded
2015-09-29T03:50:29.443Z,1443498629.443 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T03:50:29.448Z,1443498629.448 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T03:50:29.448Z,1443498629.448 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T03:50:29.607Z,1443498629.607 [DAT] Loaded
2015-09-29T03:50:29.607Z,1443498629.607 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T03:50:29.614Z,1443498629.614 [SCPI] Loaded
2015-09-29T03:50:29.614Z,1443498629.614 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T03:50:29.615Z,1443498629.615 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T03:50:29.616Z,1443498629.616 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T03:50:29.746Z,1443498629.746 [BuoyancyServo] Loaded
2015-09-29T03:50:29.746Z,1443498629.746 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T03:50:29.763Z,1443498629.763 [ElevatorServo] Loaded
2015-09-29T03:50:29.763Z,1443498629.763 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T03:50:29.775Z,1443498629.775 [MassServo] Loaded
2015-09-29T03:50:29.775Z,1443498629.775 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T03:50:29.787Z,1443498629.787 [RudderServo] Loaded
2015-09-29T03:50:29.787Z,1443498629.787 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T03:50:29.803Z,1443498629.803 [ThrusterServo] Loaded
2015-09-29T03:50:29.803Z,1443498629.803 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T03:50:29.804Z,1443498629.804 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T03:50:29.804Z,1443498629.804 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T03:50:30.002Z,1443498630.002 [InternalSim] Loaded
2015-09-29T03:50:30.002Z,1443498630.002 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T03:50:30.002Z,1443498630.002 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T03:50:30.003Z,1443498630.003 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T03:50:30.048Z,1443498630.048 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T03:50:30.052Z,1443498630.052 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T03:50:30.053Z,1443498630.053 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T03:50:30.060Z,1443498630.060 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T03:50:30.064Z,1443498630.064 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T03:50:30.064Z,1443498630.064 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T03:50:30.069Z,1443498630.069 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T03:50:30.069Z,1443498630.069 [Supervisor](DEBUG): Running supervisor.
2015-09-29T03:50:30.070Z,1443498630.070 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T03:50:30.076Z,1443498630.076 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T03:50:30.077Z,1443498630.077 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T03:50:30.078Z,1443498630.078 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T03:50:30.080Z,1443498630.080 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T03:50:30.080Z,1443498630.080 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T03:50:30.081Z,1443498630.081 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T03:50:30.081Z,1443498630.081 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T03:50:30.082Z,1443498630.082 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T03:50:30.083Z,1443498630.083 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T03:50:30.084Z,1443498630.084 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T03:50:30.085Z,1443498630.085 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T03:50:30.085Z,1443498630.085 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T03:50:30.086Z,1443498630.086 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T03:50:30.086Z,1443498630.086 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T03:50:30.086Z,1443498630.086 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T03:50:30.087Z,1443498630.087 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T03:50:30.087Z,1443498630.087 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T03:50:30.087Z,1443498630.087 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T03:50:30.087Z,1443498630.087 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T03:50:30.088Z,1443498630.088 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T03:50:30.089Z,1443498630.089 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T03:50:30.089Z,1443498630.089 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T03:50:30.090Z,1443498630.090 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T03:50:30.090Z,1443498630.090 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T03:50:30.091Z,1443498630.091 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T03:50:30.091Z,1443498630.091 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T03:50:30.091Z,1443498630.091 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T03:50:30.092Z,1443498630.092 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T03:50:30.092Z,1443498630.092 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T03:50:30.098Z,1443498630.098 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T03:50:30.128Z,1443498630.128 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T03:50:30.225Z,1443498630.225 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T03:50:30.232Z,1443498630.232 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T03:50:30.278Z,1443498630.278 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T03:50:30.288Z,1443498630.288 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T03:50:30.305Z,1443498630.305 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T03:50:30.319Z,1443498630.319 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T03:50:30.321Z,1443498630.321 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T03:50:30.321Z,1443498630.321 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T03:50:30.321Z,1443498630.321 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T03:50:30.322Z,1443498630.322 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T03:50:30.322Z,1443498630.322 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T03:50:30.322Z,1443498630.322 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T03:50:30.322Z,1443498630.322 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T03:50:30.323Z,1443498630.323 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T03:50:30.347Z,1443498630.347 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T03:50:30.367Z,1443498630.367 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T03:50:30.368Z,1443498630.368 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T03:50:30.446Z,1443498630.446 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T03:50:30.447Z,1443498630.447 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T03:50:30.478Z,1443498630.478 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T03:50:30.496Z,1443498630.496 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T03:50:30.502Z,1443498630.502 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T03:50:30.530Z,1443498630.530 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T03:50:30.536Z,1443498630.536 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T03:50:30.812Z,1443498630.812 [DVL_micro](INFO): Initializing
2015-09-29T03:50:30.980Z,1443498630.980 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:50:30.993Z,1443498630.993 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:50:31.098Z,1443498631.098 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T03:50:31.120Z,1443498631.120 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T03:50:31.126Z,1443498631.126 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T03:50:31.140Z,1443498631.140 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T03:50:31.152Z,1443498631.152 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T03:50:31.402Z,1443498631.402 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:50:31.403Z,1443498631.403 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:50:40.527Z,1443498640.527 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:40.860Z,1443498640.860 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:40.995Z,1443498640.995 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:41.395Z,1443498641.395 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T03:50:41.399Z,1443498641.399 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:41.795Z,1443498641.795 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:42.194Z,1443498642.194 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:42.593Z,1443498642.593 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:42.993Z,1443498642.993 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:43.393Z,1443498643.393 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:43.795Z,1443498643.795 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:44.193Z,1443498644.193 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:44.593Z,1443498644.593 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:44.993Z,1443498644.993 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:45.393Z,1443498645.393 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:45.792Z,1443498645.792 [NAL9602](INFO): No messages in MT queue
2015-09-29T03:50:45.793Z,1443498645.793 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:46.194Z,1443498646.194 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:46.593Z,1443498646.593 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:46.992Z,1443498646.992 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:47.397Z,1443498647.397 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:47.792Z,1443498647.792 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:48.192Z,1443498648.192 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:48.593Z,1443498648.593 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:49.001Z,1443498649.001 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:49.394Z,1443498649.394 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:49.792Z,1443498649.792 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:50.192Z,1443498650.192 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:50.593Z,1443498650.593 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:50.628Z,1443498650.628 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T03:50:50.993Z,1443498650.993 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:51.393Z,1443498651.393 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:51.792Z,1443498651.792 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:52.193Z,1443498652.193 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:52.594Z,1443498652.594 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:52.993Z,1443498652.993 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:53.393Z,1443498653.393 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:53.793Z,1443498653.793 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:54.193Z,1443498654.193 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:54.593Z,1443498654.593 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:50:54.993Z,1443498654.993 [D