2015-09-29T03:34:33.666Z,1443497673.666 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T03:34:33.670Z,1443497673.670 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T03:34:33.670Z,1443497673.670 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T03:34:33.671Z,1443497673.671 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T03:34:33.674Z,1443497673.674 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T03:34:33.674Z,1443497673.674 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T03:34:33.677Z,1443497673.677 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T03:34:33.689Z,1443497673.689 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T03:34:33.694Z,1443497673.694 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T03:34:33.694Z,1443497673.694 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T03:34:33.695Z,1443497673.695 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T03:34:33.698Z,1443497673.698 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T03:34:33.698Z,1443497673.698 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T03:34:33.700Z,1443497673.700 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T03:34:33.700Z,1443497673.700 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T03:34:33.704Z,1443497673.704 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T03:34:34.099Z,1443497674.099 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T03:34:34.101Z,1443497674.101 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T03:34:34.293Z,1443497674.293 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T03:34:34.295Z,1443497674.295 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T03:34:34.438Z,1443497674.438 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T03:34:34.439Z,1443497674.439 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T03:34:34.586Z,1443497674.586 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T03:34:34.587Z,1443497674.587 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T03:34:34.681Z,1443497674.681 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T03:34:34.902Z,1443497674.902 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T03:34:34.903Z,1443497674.903 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T03:34:34.998Z,1443497674.998 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T03:34:34.999Z,1443497674.999 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T03:34:35.311Z,1443497675.311 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T03:34:35.311Z,1443497675.311 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T03:34:35.711Z,1443497675.711 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T03:34:35.711Z,1443497675.711 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T03:34:36.065Z,1443497676.065 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T03:34:36.067Z,1443497676.067 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T03:34:36.659Z,1443497676.659 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T03:34:36.660Z,1443497676.660 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T03:34:36.891Z,1443497676.891 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T03:34:36.891Z,1443497676.891 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T03:34:37.003Z,1443497677.003 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T03:34:37.003Z,1443497677.003 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T03:34:37.518Z,1443497677.518 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T03:34:37.518Z,1443497677.518 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T03:34:37.693Z,1443497677.693 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T03:34:37.695Z,1443497677.695 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T03:34:37.695Z,1443497677.695 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T03:34:37.700Z,1443497677.700 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T03:34:37.779Z,1443497677.779 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T03:34:37.912Z,1443497677.912 [VerticalControl] Loaded
2015-09-29T03:34:37.912Z,1443497677.912 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T03:34:37.913Z,1443497677.913 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T03:34:37.993Z,1443497677.993 [HorizontalControl] Loaded
2015-09-29T03:34:37.993Z,1443497677.993 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T03:34:37.994Z,1443497677.994 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T03:34:37.000Z,1443497678.000 [SpeedControl] Loaded
2015-09-29T03:34:38.000Z,1443497678.000 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T03:34:38.001Z,1443497678.001 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T03:34:38.001Z,1443497678.001 [LoopControl] Loaded
2015-09-29T03:34:38.002Z,1443497678.002 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T03:34:38.002Z,1443497678.002 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T03:34:38.003Z,1443497678.003 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T03:34:38.161Z,1443497678.161 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T03:34:38.173Z,1443497678.173 [SBIT] Loaded
2015-09-29T03:34:38.173Z,1443497678.173 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T03:34:38.174Z,1443497678.174 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T03:34:38.207Z,1443497678.207 [IBIT] Loaded
2015-09-29T03:34:38.208Z,1443497678.208 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T03:34:38.210Z,1443497678.210 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T03:34:38.364Z,1443497678.364 [CBIT] Loaded
2015-09-29T03:34:38.364Z,1443497678.364 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T03:34:38.365Z,1443497678.365 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T03:34:38.366Z,1443497678.366 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T03:34:38.407Z,1443497678.407 [DepthRateCalculator] Loaded
2015-09-29T03:34:38.407Z,1443497678.407 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T03:34:38.412Z,1443497678.412 [PitchRateCalculator] Loaded
2015-09-29T03:34:38.413Z,1443497678.413 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T03:34:38.424Z,1443497678.424 [SpeedCalculator] Loaded
2015-09-29T03:34:38.424Z,1443497678.424 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T03:34:38.445Z,1443497678.445 [TempGradientCalculator] Loaded
2015-09-29T03:34:38.446Z,1443497678.446 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T03:34:38.463Z,1443497678.463 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T03:34:38.463Z,1443497678.463 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T03:34:38.468Z,1443497678.468 [YawRateCalculator] Loaded
2015-09-29T03:34:38.469Z,1443497678.469 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T03:34:38.469Z,1443497678.469 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T03:34:38.470Z,1443497678.470 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T03:34:38.594Z,1443497678.594 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T03:34:38.594Z,1443497678.594 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T03:34:38.595Z,1443497678.595 [StratificationFrontDetector] Loaded
2015-09-29T03:34:38.595Z,1443497678.595 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T03:34:38.595Z,1443497678.595 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T03:34:38.596Z,1443497678.596 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T03:34:38.882Z,1443497678.882 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T03:34:38.883Z,1443497678.883 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T03:34:39.015Z,1443497679.015 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T03:34:39.015Z,1443497679.015 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T03:34:39.075Z,1443497679.075 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T03:34:39.076Z,1443497679.076 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T03:34:39.093Z,1443497679.093 [NavChart] Loaded
2015-09-29T03:34:39.093Z,1443497679.093 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T03:34:39.103Z,1443497679.103 [UniversalFixResidualReporter] Loaded
2015-09-29T03:34:39.103Z,1443497679.103 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T03:34:39.103Z,1443497679.103 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T03:34:39.104Z,1443497679.104 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T03:34:39.113Z,1443497679.113 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T03:34:39.113Z,1443497679.113 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T03:34:39.410Z,1443497679.410 [CTD_NeilBrown] Loaded
2015-09-29T03:34:39.410Z,1443497679.410 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T03:34:39.414Z,1443497679.414 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T03:34:39.414Z,1443497679.414 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T03:34:39.427Z,1443497679.427 [ISUS] Loaded
2015-09-29T03:34:39.427Z,1443497679.427 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T03:34:39.446Z,1443497679.446 [PAR_Licor] Loaded
2015-09-29T03:34:39.446Z,1443497679.446 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T03:34:39.501Z,1443497679.501 [WetLabsBB2FL] Loaded
2015-09-29T03:34:39.502Z,1443497679.502 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T03:34:39.506Z,1443497679.506 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T03:34:39.506Z,1443497679.506 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T03:34:39.506Z,1443497679.506 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T03:34:39.507Z,1443497679.507 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T03:34:40.231Z,1443497680.231 [AHRS_sp3003D] Loaded
2015-09-29T03:34:40.231Z,1443497680.231 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T03:34:40.424Z,1443497680.424 [DataOverHttps] Loaded
2015-09-29T03:34:40.425Z,1443497680.425 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T03:34:40.438Z,1443497680.438 [Depth_Keller] Loaded
2015-09-29T03:34:40.438Z,1443497680.438 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T03:34:40.443Z,1443497680.443 [DropWeight] Loaded
2015-09-29T03:34:40.444Z,1443497680.444 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T03:34:40.599Z,1443497680.599 [DVL_micro] Loaded
2015-09-29T03:34:40.599Z,1443497680.599 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T03:34:40.703Z,1443497680.703 [NAL9602] Loaded
2015-09-29T03:34:40.704Z,1443497680.704 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T03:34:40.750Z,1443497680.750 [Onboard] Loaded
2015-09-29T03:34:40.750Z,1443497680.750 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T03:34:40.766Z,1443497680.766 [Radio_Surface] Loaded
2015-09-29T03:34:40.766Z,1443497680.766 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T03:34:40.770Z,1443497680.770 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T03:34:40.770Z,1443497680.770 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T03:34:40.928Z,1443497680.928 [DAT] Loaded
2015-09-29T03:34:40.928Z,1443497680.928 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T03:34:40.935Z,1443497680.935 [SCPI] Loaded
2015-09-29T03:34:40.935Z,1443497680.935 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T03:34:40.936Z,1443497680.936 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T03:34:40.937Z,1443497680.937 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T03:34:41.066Z,1443497681.066 [BuoyancyServo] Loaded
2015-09-29T03:34:41.067Z,1443497681.067 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T03:34:41.083Z,1443497681.083 [ElevatorServo] Loaded
2015-09-29T03:34:41.084Z,1443497681.084 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T03:34:41.095Z,1443497681.095 [MassServo] Loaded
2015-09-29T03:34:41.096Z,1443497681.096 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T03:34:41.107Z,1443497681.107 [RudderServo] Loaded
2015-09-29T03:34:41.108Z,1443497681.108 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T03:34:41.123Z,1443497681.123 [ThrusterServo] Loaded
2015-09-29T03:34:41.123Z,1443497681.123 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T03:34:41.124Z,1443497681.124 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T03:34:41.124Z,1443497681.124 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T03:34:41.321Z,1443497681.321 [InternalSim] Loaded
2015-09-29T03:34:41.325Z,1443497681.325 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T03:34:41.326Z,1443497681.326 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T03:34:41.327Z,1443497681.327 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T03:34:41.373Z,1443497681.373 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T03:34:41.377Z,1443497681.377 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T03:34:41.378Z,1443497681.378 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T03:34:41.385Z,1443497681.385 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T03:34:41.390Z,1443497681.390 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T03:34:41.390Z,1443497681.390 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T03:34:41.395Z,1443497681.395 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T03:34:41.395Z,1443497681.395 [Supervisor](DEBUG): Running supervisor.
2015-09-29T03:34:41.396Z,1443497681.396 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T03:34:41.402Z,1443497681.402 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T03:34:41.402Z,1443497681.402 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T03:34:41.403Z,1443497681.403 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T03:34:41.405Z,1443497681.405 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T03:34:41.406Z,1443497681.406 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T03:34:41.407Z,1443497681.407 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T03:34:41.407Z,1443497681.407 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T03:34:41.407Z,1443497681.407 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T03:34:41.409Z,1443497681.409 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T03:34:41.409Z,1443497681.409 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T03:34:41.410Z,1443497681.410 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T03:34:41.411Z,1443497681.411 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T03:34:41.411Z,1443497681.411 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T03:34:41.412Z,1443497681.412 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T03:34:41.412Z,1443497681.412 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T03:34:41.412Z,1443497681.412 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T03:34:41.413Z,1443497681.413 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T03:34:41.413Z,1443497681.413 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T03:34:41.413Z,1443497681.413 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T03:34:41.414Z,1443497681.414 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T03:34:41.414Z,1443497681.414 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T03:34:41.415Z,1443497681.415 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T03:34:41.416Z,1443497681.416 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T03:34:41.416Z,1443497681.416 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T03:34:41.416Z,1443497681.416 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T03:34:41.417Z,1443497681.417 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T03:34:41.417Z,1443497681.417 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T03:34:41.418Z,1443497681.418 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T03:34:41.418Z,1443497681.418 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T03:34:41.423Z,1443497681.423 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T03:34:41.458Z,1443497681.458 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T03:34:41.546Z,1443497681.546 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T03:34:41.555Z,1443497681.555 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T03:34:41.618Z,1443497681.618 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T03:34:41.633Z,1443497681.633 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T03:34:41.645Z,1443497681.645 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T03:34:41.704Z,1443497681.704 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T03:34:41.715Z,1443497681.715 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T03:34:41.715Z,1443497681.715 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T03:34:41.768Z,1443497681.768 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T03:34:41.770Z,1443497681.770 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T03:34:41.770Z,1443497681.770 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T03:34:41.771Z,1443497681.771 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T03:34:41.771Z,1443497681.771 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T03:34:41.771Z,1443497681.771 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T03:34:41.771Z,1443497681.771 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T03:34:41.772Z,1443497681.772 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T03:34:41.772Z,1443497681.772 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T03:34:41.802Z,1443497681.802 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T03:34:41.803Z,1443497681.803 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T03:34:41.828Z,1443497681.828 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T03:34:41.830Z,1443497681.830 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T03:34:41.852Z,1443497681.852 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T03:34:41.873Z,1443497681.873 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T03:34:41.895Z,1443497681.895 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T03:34:42.182Z,1443497682.182 [DVL_micro](INFO): Initializing
2015-09-29T03:34:42.326Z,1443497682.326 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:34:42.338Z,1443497682.338 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:34:42.450Z,1443497682.450 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T03:34:42.462Z,1443497682.462 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T03:34:42.475Z,1443497682.475 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T03:34:42.484Z,1443497682.484 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T03:34:42.502Z,1443497682.502 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T03:34:42.752Z,1443497682.752 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:34:42.753Z,1443497682.753 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:34:51.847Z,1443497691.847 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:52.169Z,1443497692.169 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:52.324Z,1443497692.324 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:52.724Z,1443497692.724 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T03:34:52.728Z,1443497692.728 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:53.124Z,1443497693.124 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:53.523Z,1443497693.523 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:53.923Z,1443497693.923 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:54.323Z,1443497694.323 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:54.722Z,1443497694.722 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:55.122Z,1443497695.122 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:55.522Z,1443497695.522 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:55.923Z,1443497695.923 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:56.322Z,1443497696.322 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:56.723Z,1443497696.723 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:57.122Z,1443497697.122 [NAL9602](INFO): No messages in MT queue
2015-09-29T03:34:57.122Z,1443497697.122 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:57.523Z,1443497697.523 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:57.922Z,1443497697.922 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:58.323Z,1443497698.323 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:58.722Z,1443497698.722 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:59.122Z,1443497699.122 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:59.523Z,1443497699.523 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:34:59.923Z,1443497699.923 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:00.322Z,1443497700.322 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:00.722Z,1443497700.722 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:01.122Z,1443497701.122 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:01.523Z,1443497701.523 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:01.922Z,1443497701.922 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:01.937Z,1443497701.937 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T03:35:02.322Z,1443497702.322 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:02.726Z,1443497702.726 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:03.122Z,1443497703.122 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:03.522Z,1443497703.522 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:03.922Z,1443497703.922 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:04.326Z,1443497704.326 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:04.728Z,1443497704.728 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:05.128Z,1443497705.128 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:05.526Z,1443497705.526 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:05.929Z,1443497705.929 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:35:06.328Z,1443497706.328 [D