2015-09-29T03:26:39.600Z,1443497199.600 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T03:26:39.603Z,1443497199.603 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T03:26:39.604Z,1443497199.604 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T03:26:39.604Z,1443497199.604 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T03:26:39.605Z,1443497199.605 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T03:26:39.606Z,1443497199.606 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T03:26:39.608Z,1443497199.608 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T03:26:39.621Z,1443497199.621 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T03:26:39.625Z,1443497199.625 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T03:26:39.626Z,1443497199.626 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T03:26:39.626Z,1443497199.626 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T03:26:39.629Z,1443497199.629 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T03:26:39.630Z,1443497199.630 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T03:26:39.632Z,1443497199.632 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T03:26:39.632Z,1443497199.632 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T03:26:39.636Z,1443497199.636 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T03:26:40.046Z,1443497200.046 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T03:26:40.048Z,1443497200.048 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T03:26:40.250Z,1443497200.250 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T03:26:40.252Z,1443497200.252 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T03:26:40.401Z,1443497200.401 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T03:26:40.401Z,1443497200.401 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T03:26:40.554Z,1443497200.554 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T03:26:40.555Z,1443497200.555 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T03:26:40.650Z,1443497200.650 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T03:26:40.877Z,1443497200.877 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T03:26:40.877Z,1443497200.877 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T03:26:40.972Z,1443497200.972 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T03:26:40.973Z,1443497200.973 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T03:26:41.298Z,1443497201.298 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T03:26:41.299Z,1443497201.299 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T03:26:41.715Z,1443497201.715 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T03:26:41.716Z,1443497201.716 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T03:26:42.086Z,1443497202.086 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T03:26:42.088Z,1443497202.088 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T03:26:42.673Z,1443497202.673 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T03:26:42.674Z,1443497202.674 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T03:26:42.891Z,1443497202.891 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T03:26:42.892Z,1443497202.892 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T03:26:43.000Z,1443497203.000 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T03:26:43.001Z,1443497203.001 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T03:26:43.486Z,1443497203.486 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T03:26:43.487Z,1443497203.487 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T03:26:43.650Z,1443497203.650 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T03:26:43.652Z,1443497203.652 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T03:26:43.652Z,1443497203.652 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T03:26:43.657Z,1443497203.657 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T03:26:43.730Z,1443497203.730 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T03:26:43.861Z,1443497203.861 [VerticalControl] Loaded
2015-09-29T03:26:43.861Z,1443497203.861 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T03:26:43.862Z,1443497203.862 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T03:26:43.940Z,1443497203.940 [HorizontalControl] Loaded
2015-09-29T03:26:43.940Z,1443497203.940 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T03:26:43.941Z,1443497203.941 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T03:26:43.947Z,1443497203.947 [SpeedControl] Loaded
2015-09-29T03:26:43.947Z,1443497203.947 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T03:26:43.948Z,1443497203.948 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T03:26:43.949Z,1443497203.949 [LoopControl] Loaded
2015-09-29T03:26:43.949Z,1443497203.949 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T03:26:43.950Z,1443497203.950 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T03:26:43.950Z,1443497203.950 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T03:26:44.104Z,1443497204.104 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T03:26:44.116Z,1443497204.116 [SBIT] Loaded
2015-09-29T03:26:44.117Z,1443497204.117 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T03:26:44.118Z,1443497204.118 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T03:26:44.149Z,1443497204.149 [IBIT] Loaded
2015-09-29T03:26:44.149Z,1443497204.149 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T03:26:44.152Z,1443497204.152 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T03:26:44.299Z,1443497204.299 [CBIT] Loaded
2015-09-29T03:26:44.300Z,1443497204.300 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T03:26:44.300Z,1443497204.300 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T03:26:44.301Z,1443497204.301 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T03:26:44.339Z,1443497204.339 [DepthRateCalculator] Loaded
2015-09-29T03:26:44.340Z,1443497204.340 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T03:26:44.345Z,1443497204.345 [PitchRateCalculator] Loaded
2015-09-29T03:26:44.346Z,1443497204.346 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T03:26:44.358Z,1443497204.358 [SpeedCalculator] Loaded
2015-09-29T03:26:44.358Z,1443497204.358 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T03:26:44.377Z,1443497204.377 [TempGradientCalculator] Loaded
2015-09-29T03:26:44.377Z,1443497204.377 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T03:26:44.395Z,1443497204.395 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T03:26:44.395Z,1443497204.395 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T03:26:44.401Z,1443497204.401 [YawRateCalculator] Loaded
2015-09-29T03:26:44.402Z,1443497204.402 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T03:26:44.402Z,1443497204.402 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T03:26:44.403Z,1443497204.403 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T03:26:44.518Z,1443497204.518 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T03:26:44.518Z,1443497204.518 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T03:26:44.518Z,1443497204.518 [StratificationFrontDetector] Loaded
2015-09-29T03:26:44.519Z,1443497204.519 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T03:26:44.519Z,1443497204.519 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T03:26:44.520Z,1443497204.520 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T03:26:44.798Z,1443497204.798 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T03:26:44.799Z,1443497204.799 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T03:26:44.925Z,1443497204.925 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T03:26:44.925Z,1443497204.925 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T03:26:44.986Z,1443497204.986 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T03:26:44.986Z,1443497204.986 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T03:26:45.005Z,1443497205.005 [NavChart] Loaded
2015-09-29T03:26:45.005Z,1443497205.005 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T03:26:45.011Z,1443497205.011 [UniversalFixResidualReporter] Loaded
2015-09-29T03:26:45.011Z,1443497205.011 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T03:26:45.011Z,1443497205.011 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T03:26:45.012Z,1443497205.012 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T03:26:45.021Z,1443497205.021 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T03:26:45.021Z,1443497205.021 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T03:26:45.315Z,1443497205.315 [CTD_NeilBrown] Loaded
2015-09-29T03:26:45.315Z,1443497205.315 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T03:26:45.317Z,1443497205.317 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T03:26:45.317Z,1443497205.317 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T03:26:45.331Z,1443497205.331 [ISUS] Loaded
2015-09-29T03:26:45.331Z,1443497205.331 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T03:26:45.347Z,1443497205.347 [PAR_Licor] Loaded
2015-09-29T03:26:45.347Z,1443497205.347 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T03:26:45.402Z,1443497205.402 [WetLabsBB2FL] Loaded
2015-09-29T03:26:45.403Z,1443497205.403 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T03:26:45.404Z,1443497205.404 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T03:26:45.404Z,1443497205.404 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T03:26:45.405Z,1443497205.405 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T03:26:45.405Z,1443497205.405 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T03:26:46.067Z,1443497206.067 [AHRS_sp3003D] Loaded
2015-09-29T03:26:46.068Z,1443497206.068 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T03:26:46.237Z,1443497206.237 [DataOverHttps] Loaded
2015-09-29T03:26:46.237Z,1443497206.237 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T03:26:46.251Z,1443497206.251 [Depth_Keller] Loaded
2015-09-29T03:26:46.252Z,1443497206.252 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T03:26:46.257Z,1443497206.257 [DropWeight] Loaded
2015-09-29T03:26:46.257Z,1443497206.257 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T03:26:46.406Z,1443497206.406 [DVL_micro] Loaded
2015-09-29T03:26:46.406Z,1443497206.406 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T03:26:46.508Z,1443497206.508 [NAL9602] Loaded
2015-09-29T03:26:46.508Z,1443497206.508 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T03:26:46.554Z,1443497206.554 [Onboard] Loaded
2015-09-29T03:26:46.555Z,1443497206.555 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T03:26:46.567Z,1443497206.567 [Radio_Surface] Loaded
2015-09-29T03:26:46.567Z,1443497206.567 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T03:26:46.569Z,1443497206.569 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T03:26:46.569Z,1443497206.569 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T03:26:46.721Z,1443497206.721 [DAT] Loaded
2015-09-29T03:26:46.722Z,1443497206.722 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T03:26:46.729Z,1443497206.729 [SCPI] Loaded
2015-09-29T03:26:46.729Z,1443497206.729 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T03:26:46.730Z,1443497206.730 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T03:26:46.731Z,1443497206.731 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T03:26:46.858Z,1443497206.858 [BuoyancyServo] Loaded
2015-09-29T03:26:46.858Z,1443497206.858 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T03:26:46.872Z,1443497206.872 [ElevatorServo] Loaded
2015-09-29T03:26:46.872Z,1443497206.872 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T03:26:46.885Z,1443497206.885 [MassServo] Loaded
2015-09-29T03:26:46.885Z,1443497206.885 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T03:26:46.898Z,1443497206.898 [RudderServo] Loaded
2015-09-29T03:26:46.898Z,1443497206.898 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T03:26:46.910Z,1443497206.910 [ThrusterServo] Loaded
2015-09-29T03:26:46.910Z,1443497206.910 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T03:26:46.911Z,1443497206.911 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T03:26:46.912Z,1443497206.912 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T03:26:47.103Z,1443497207.103 [InternalSim] Loaded
2015-09-29T03:26:47.103Z,1443497207.103 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T03:26:47.104Z,1443497207.104 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T03:26:47.104Z,1443497207.104 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T03:26:47.144Z,1443497207.144 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T03:26:47.149Z,1443497207.149 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T03:26:47.150Z,1443497207.150 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T03:26:47.156Z,1443497207.156 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T03:26:47.157Z,1443497207.157 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T03:26:47.158Z,1443497207.158 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T03:26:47.163Z,1443497207.163 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T03:26:47.163Z,1443497207.163 [Supervisor](DEBUG): Running supervisor.
2015-09-29T03:26:47.164Z,1443497207.164 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T03:26:47.166Z,1443497207.166 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T03:26:47.167Z,1443497207.167 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T03:26:47.168Z,1443497207.168 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T03:26:47.170Z,1443497207.170 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T03:26:47.170Z,1443497207.170 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T03:26:47.171Z,1443497207.171 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T03:26:47.171Z,1443497207.171 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T03:26:47.172Z,1443497207.172 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T03:26:47.173Z,1443497207.173 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T03:26:47.174Z,1443497207.174 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T03:26:47.175Z,1443497207.175 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T03:26:47.175Z,1443497207.175 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T03:26:47.176Z,1443497207.176 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T03:26:47.176Z,1443497207.176 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T03:26:47.176Z,1443497207.176 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T03:26:47.177Z,1443497207.177 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T03:26:47.177Z,1443497207.177 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T03:26:47.177Z,1443497207.177 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T03:26:47.177Z,1443497207.177 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T03:26:47.178Z,1443497207.178 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T03:26:47.179Z,1443497207.179 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T03:26:47.179Z,1443497207.179 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T03:26:47.180Z,1443497207.180 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T03:26:47.180Z,1443497207.180 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T03:26:47.181Z,1443497207.181 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T03:26:47.181Z,1443497207.181 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T03:26:47.181Z,1443497207.181 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T03:26:47.182Z,1443497207.182 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T03:26:47.182Z,1443497207.182 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T03:26:47.187Z,1443497207.187 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T03:26:47.206Z,1443497207.206 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T03:26:47.246Z,1443497207.246 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T03:26:47.301Z,1443497207.301 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T03:26:47.310Z,1443497207.310 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T03:26:47.353Z,1443497207.353 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T03:26:47.366Z,1443497207.366 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T03:26:47.368Z,1443497207.368 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T03:26:47.368Z,1443497207.368 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T03:26:47.368Z,1443497207.368 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T03:26:47.369Z,1443497207.369 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T03:26:47.369Z,1443497207.369 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T03:26:47.369Z,1443497207.369 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T03:26:47.370Z,1443497207.370 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T03:26:47.370Z,1443497207.370 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T03:26:47.382Z,1443497207.382 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T03:26:47.412Z,1443497207.412 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T03:26:47.443Z,1443497207.443 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T03:26:47.444Z,1443497207.444 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T03:26:47.516Z,1443497207.516 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T03:26:47.518Z,1443497207.518 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T03:26:47.536Z,1443497207.536 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T03:26:47.562Z,1443497207.562 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T03:26:47.584Z,1443497207.584 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T03:26:47.600Z,1443497207.600 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T03:26:47.610Z,1443497207.610 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T03:26:47.836Z,1443497207.836 [DVL_micro](INFO): Initializing
2015-09-29T03:26:47.986Z,1443497207.986 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:26:47.993Z,1443497207.993 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:26:48.103Z,1443497208.103 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T03:26:48.119Z,1443497208.119 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T03:26:48.132Z,1443497208.132 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T03:26:48.154Z,1443497208.154 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T03:26:48.165Z,1443497208.165 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T03:26:48.401Z,1443497208.401 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:26:48.402Z,1443497208.402 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:26:57.254Z,1443497217.254 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:26:57.553Z,1443497217.553 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:26:57.717Z,1443497217.717 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:26:58.116Z,1443497218.116 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T03:26:58.120Z,1443497218.120 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:26:58.514Z,1443497218.514 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:26:58.914Z,1443497218.914 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:26:59.314Z,1443497219.314 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:26:59.714Z,1443497219.714 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:00.115Z,1443497220.115 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:00.516Z,1443497220.516 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:00.913Z,1443497220.913 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:01.324Z,1443497221.324 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:01.723Z,1443497221.723 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:02.124Z,1443497222.124 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:02.523Z,1443497222.523 [NAL9602](INFO): No messages in MT queue
2015-09-29T03:27:02.524Z,1443497222.524 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:02.925Z,1443497222.925 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:03.323Z,1443497223.323 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:03.723Z,1443497223.723 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:04.123Z,1443497224.123 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:04.523Z,1443497224.523 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:04.924Z,1443497224.924 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:05.324Z,1443497225.324 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:05.723Z,1443497225.723 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:06.123Z,1443497226.123 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:06.524Z,1443497226.524 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:06.923Z,1443497226.923 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:07.324Z,1443497227.324 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:07.724Z,1443497227.724 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:07.750Z,1443497227.750 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T03:27:08.123Z,1443497228.123 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:08.524Z,1443497228.524 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:08.924Z,1443497228.924 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:09.324Z,1443497229.324 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:09.725Z,1443497229.725 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:10.124Z,1443497230.124 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:10.525Z,1443497230.525 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:10.924Z,1443497230.924 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:11.324Z,1443497231.324 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:27:11.724Z,1443497231.724 [D