2015-09-29T03:18:46.157Z,1443496726.157 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T03:18:46.160Z,1443496726.160 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T03:18:46.160Z,1443496726.160 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T03:18:46.161Z,1443496726.161 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T03:18:46.163Z,1443496726.163 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T03:18:46.163Z,1443496726.163 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T03:18:46.166Z,1443496726.166 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T03:18:46.178Z,1443496726.178 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T03:18:46.183Z,1443496726.183 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T03:18:46.183Z,1443496726.183 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T03:18:46.184Z,1443496726.184 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T03:18:46.187Z,1443496726.187 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T03:18:46.187Z,1443496726.187 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T03:18:46.189Z,1443496726.189 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T03:18:46.189Z,1443496726.189 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T03:18:46.193Z,1443496726.193 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T03:18:46.585Z,1443496726.585 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T03:18:46.587Z,1443496726.587 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T03:18:46.775Z,1443496726.775 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T03:18:46.777Z,1443496726.777 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T03:18:46.923Z,1443496726.923 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T03:18:46.924Z,1443496726.924 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T03:18:47.075Z,1443496727.075 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T03:18:47.076Z,1443496727.076 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T03:18:47.170Z,1443496727.170 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T03:18:47.391Z,1443496727.391 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T03:18:47.392Z,1443496727.392 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T03:18:47.487Z,1443496727.487 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T03:18:47.488Z,1443496727.488 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T03:18:47.804Z,1443496727.804 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T03:18:47.804Z,1443496727.804 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T03:18:48.204Z,1443496728.204 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T03:18:48.204Z,1443496728.204 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T03:18:48.556Z,1443496728.556 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T03:18:48.558Z,1443496728.558 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T03:18:49.160Z,1443496729.160 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T03:18:49.161Z,1443496729.161 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T03:18:49.392Z,1443496729.392 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T03:18:49.392Z,1443496729.392 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T03:18:49.508Z,1443496729.508 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T03:18:49.509Z,1443496729.509 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T03:18:50.026Z,1443496730.026 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T03:18:50.027Z,1443496730.027 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T03:18:50.163Z,1443496730.163 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T03:18:50.165Z,1443496730.165 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T03:18:50.166Z,1443496730.166 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T03:18:50.170Z,1443496730.170 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T03:18:50.244Z,1443496730.244 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T03:18:50.380Z,1443496730.380 [VerticalControl] Loaded
2015-09-29T03:18:50.381Z,1443496730.381 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T03:18:50.381Z,1443496730.381 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T03:18:50.463Z,1443496730.463 [HorizontalControl] Loaded
2015-09-29T03:18:50.464Z,1443496730.464 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T03:18:50.464Z,1443496730.464 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T03:18:50.471Z,1443496730.471 [SpeedControl] Loaded
2015-09-29T03:18:50.471Z,1443496730.471 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T03:18:50.472Z,1443496730.472 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T03:18:50.472Z,1443496730.472 [LoopControl] Loaded
2015-09-29T03:18:50.472Z,1443496730.472 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T03:18:50.473Z,1443496730.473 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T03:18:50.474Z,1443496730.474 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T03:18:50.636Z,1443496730.636 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T03:18:50.648Z,1443496730.648 [SBIT] Loaded
2015-09-29T03:18:50.648Z,1443496730.648 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T03:18:50.649Z,1443496730.649 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T03:18:50.683Z,1443496730.683 [IBIT] Loaded
2015-09-29T03:18:50.684Z,1443496730.684 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T03:18:50.686Z,1443496730.686 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T03:18:50.843Z,1443496730.843 [CBIT] Loaded
2015-09-29T03:18:50.844Z,1443496730.844 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T03:18:50.844Z,1443496730.844 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T03:18:50.845Z,1443496730.845 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T03:18:50.886Z,1443496730.886 [DepthRateCalculator] Loaded
2015-09-29T03:18:50.887Z,1443496730.887 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T03:18:50.892Z,1443496730.892 [PitchRateCalculator] Loaded
2015-09-29T03:18:50.893Z,1443496730.893 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T03:18:50.904Z,1443496730.904 [SpeedCalculator] Loaded
2015-09-29T03:18:50.904Z,1443496730.904 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T03:18:50.926Z,1443496730.926 [TempGradientCalculator] Loaded
2015-09-29T03:18:50.926Z,1443496730.926 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T03:18:50.944Z,1443496730.944 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T03:18:50.944Z,1443496730.944 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T03:18:50.949Z,1443496730.949 [YawRateCalculator] Loaded
2015-09-29T03:18:50.950Z,1443496730.950 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T03:18:50.950Z,1443496730.950 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T03:18:50.951Z,1443496730.951 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T03:18:51.073Z,1443496731.073 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T03:18:51.073Z,1443496731.073 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T03:18:51.074Z,1443496731.074 [StratificationFrontDetector] Loaded
2015-09-29T03:18:51.074Z,1443496731.074 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T03:18:51.079Z,1443496731.079 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T03:18:51.079Z,1443496731.079 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T03:18:51.376Z,1443496731.376 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T03:18:51.377Z,1443496731.377 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T03:18:51.511Z,1443496731.511 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T03:18:51.511Z,1443496731.511 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T03:18:51.573Z,1443496731.573 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T03:18:51.573Z,1443496731.573 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T03:18:51.595Z,1443496731.595 [NavChart] Loaded
2015-09-29T03:18:51.596Z,1443496731.596 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T03:18:51.601Z,1443496731.601 [UniversalFixResidualReporter] Loaded
2015-09-29T03:18:51.601Z,1443496731.601 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T03:18:51.602Z,1443496731.602 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T03:18:51.602Z,1443496731.602 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T03:18:51.611Z,1443496731.611 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T03:18:51.611Z,1443496731.611 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T03:18:51.922Z,1443496731.922 [CTD_NeilBrown] Loaded
2015-09-29T03:18:51.922Z,1443496731.922 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T03:18:51.927Z,1443496731.927 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T03:18:51.927Z,1443496731.927 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T03:18:51.940Z,1443496731.940 [ISUS] Loaded
2015-09-29T03:18:51.940Z,1443496731.940 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T03:18:51.959Z,1443496731.959 [PAR_Licor] Loaded
2015-09-29T03:18:51.960Z,1443496731.960 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T03:18:52.016Z,1443496732.016 [WetLabsBB2FL] Loaded
2015-09-29T03:18:52.017Z,1443496732.017 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T03:18:52.019Z,1443496732.019 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T03:18:52.019Z,1443496732.019 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T03:18:52.019Z,1443496732.019 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T03:18:52.020Z,1443496732.020 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T03:18:52.764Z,1443496732.764 [AHRS_sp3003D] Loaded
2015-09-29T03:18:52.764Z,1443496732.764 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T03:18:52.963Z,1443496732.963 [DataOverHttps] Loaded
2015-09-29T03:18:52.963Z,1443496732.963 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T03:18:52.981Z,1443496732.981 [Depth_Keller] Loaded
2015-09-29T03:18:52.981Z,1443496732.981 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T03:18:52.986Z,1443496732.986 [DropWeight] Loaded
2015-09-29T03:18:52.986Z,1443496732.986 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T03:18:53.141Z,1443496733.141 [DVL_micro] Loaded
2015-09-29T03:18:53.142Z,1443496733.142 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T03:18:53.252Z,1443496733.252 [NAL9602] Loaded
2015-09-29T03:18:53.252Z,1443496733.252 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T03:18:53.301Z,1443496733.301 [Onboard] Loaded
2015-09-29T03:18:53.301Z,1443496733.301 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T03:18:53.317Z,1443496733.317 [Radio_Surface] Loaded
2015-09-29T03:18:53.317Z,1443496733.317 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T03:18:53.323Z,1443496733.323 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T03:18:53.323Z,1443496733.323 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T03:18:53.486Z,1443496733.486 [DAT] Loaded
2015-09-29T03:18:53.486Z,1443496733.486 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T03:18:53.493Z,1443496733.493 [SCPI] Loaded
2015-09-29T03:18:53.493Z,1443496733.493 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T03:18:53.494Z,1443496733.494 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T03:18:53.494Z,1443496733.494 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T03:18:53.626Z,1443496733.626 [BuoyancyServo] Loaded
2015-09-29T03:18:53.626Z,1443496733.626 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T03:18:53.639Z,1443496733.639 [ElevatorServo] Loaded
2015-09-29T03:18:53.639Z,1443496733.639 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T03:18:53.655Z,1443496733.655 [MassServo] Loaded
2015-09-29T03:18:53.655Z,1443496733.655 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T03:18:53.667Z,1443496733.667 [RudderServo] Loaded
2015-09-29T03:18:53.668Z,1443496733.668 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T03:18:53.679Z,1443496733.679 [ThrusterServo] Loaded
2015-09-29T03:18:53.679Z,1443496733.679 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T03:18:53.680Z,1443496733.680 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T03:18:53.681Z,1443496733.681 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T03:18:53.886Z,1443496733.886 [InternalSim] Loaded
2015-09-29T03:18:53.886Z,1443496733.886 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T03:18:53.887Z,1443496733.887 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T03:18:53.888Z,1443496733.888 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T03:18:53.931Z,1443496733.931 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T03:18:53.935Z,1443496733.935 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T03:18:53.936Z,1443496733.936 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T03:18:53.943Z,1443496733.943 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T03:18:53.947Z,1443496733.947 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T03:18:53.947Z,1443496733.947 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T03:18:53.952Z,1443496733.952 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T03:18:53.952Z,1443496733.952 [Supervisor](DEBUG): Running supervisor.
2015-09-29T03:18:53.953Z,1443496733.953 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T03:18:53.959Z,1443496733.959 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T03:18:53.959Z,1443496733.959 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T03:18:53.960Z,1443496733.960 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T03:18:53.962Z,1443496733.962 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T03:18:53.963Z,1443496733.963 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T03:18:53.964Z,1443496733.964 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T03:18:53.964Z,1443496733.964 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T03:18:53.964Z,1443496733.964 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T03:18:53.966Z,1443496733.966 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T03:18:53.966Z,1443496733.966 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T03:18:53.967Z,1443496733.967 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T03:18:53.968Z,1443496733.968 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T03:18:53.968Z,1443496733.968 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T03:18:53.969Z,1443496733.969 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T03:18:53.969Z,1443496733.969 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T03:18:53.969Z,1443496733.969 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T03:18:53.970Z,1443496733.970 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T03:18:53.970Z,1443496733.970 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T03:18:53.970Z,1443496733.970 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T03:18:53.971Z,1443496733.971 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T03:18:53.971Z,1443496733.971 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T03:18:53.972Z,1443496733.972 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T03:18:53.973Z,1443496733.973 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T03:18:53.973Z,1443496733.973 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T03:18:53.973Z,1443496733.973 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T03:18:53.974Z,1443496733.974 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T03:18:53.974Z,1443496733.974 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T03:18:53.975Z,1443496733.975 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T03:18:53.975Z,1443496733.975 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T03:18:53.980Z,1443496733.980 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T03:18:54.015Z,1443496734.015 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T03:18:54.103Z,1443496734.103 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T03:18:54.112Z,1443496734.112 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T03:18:54.176Z,1443496734.176 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T03:18:54.203Z,1443496734.203 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T03:18:54.223Z,1443496734.223 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T03:18:54.232Z,1443496734.232 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T03:18:54.234Z,1443496734.234 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T03:18:54.235Z,1443496734.235 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T03:18:54.235Z,1443496734.235 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T03:18:54.235Z,1443496734.235 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T03:18:54.235Z,1443496734.235 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T03:18:54.236Z,1443496734.236 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T03:18:54.236Z,1443496734.236 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T03:18:54.236Z,1443496734.236 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T03:18:54.269Z,1443496734.269 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T03:18:54.294Z,1443496734.294 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T03:18:54.320Z,1443496734.320 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T03:18:54.383Z,1443496734.383 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T03:18:54.384Z,1443496734.384 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T03:18:54.430Z,1443496734.430 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T03:18:54.433Z,1443496734.433 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T03:18:54.456Z,1443496734.456 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T03:18:54.459Z,1443496734.459 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T03:18:54.480Z,1443496734.480 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T03:18:54.711Z,1443496734.711 [DVL_micro](INFO): Initializing
2015-09-29T03:18:54.864Z,1443496734.864 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:18:54.892Z,1443496734.892 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:18:55.014Z,1443496735.014 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T03:18:55.061Z,1443496735.061 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T03:18:55.095Z,1443496735.095 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T03:18:55.107Z,1443496735.107 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T03:18:55.119Z,1443496735.119 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T03:18:55.361Z,1443496735.361 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:18:55.362Z,1443496735.362 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:19:04.498Z,1443496744.498 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:04.835Z,1443496744.835 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:04.989Z,1443496744.989 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:05.389Z,1443496745.389 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T03:19:05.393Z,1443496745.393 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:05.788Z,1443496745.788 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:06.188Z,1443496746.188 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:06.588Z,1443496746.588 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:06.988Z,1443496746.988 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:07.388Z,1443496747.388 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:07.789Z,1443496747.789 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:08.187Z,1443496748.187 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:08.587Z,1443496748.587 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:08.988Z,1443496748.988 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:09.387Z,1443496749.387 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:09.786Z,1443496749.786 [NAL9602](INFO): No messages in MT queue
2015-09-29T03:19:09.787Z,1443496749.787 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:10.189Z,1443496750.189 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:10.587Z,1443496750.587 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:10.987Z,1443496750.987 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:11.388Z,1443496751.388 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:11.787Z,1443496751.787 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:12.188Z,1443496752.188 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:12.588Z,1443496752.588 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:12.987Z,1443496752.987 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:13.387Z,1443496753.387 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:13.787Z,1443496753.787 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:14.187Z,1443496754.187 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:14.587Z,1443496754.587 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:14.638Z,1443496754.638 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T03:19:14.988Z,1443496754.988 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:15.387Z,1443496755.387 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:15.787Z,1443496755.787 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:16.187Z,1443496756.187 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:16.587Z,1443496756.587 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:16.989Z,1443496756.989 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:17.387Z,1443496757.387 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:17.787Z,1443496757.787 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:18.188Z,1443496758.188 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:18.588Z,1443496758.588 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:19:18.988Z,1443496758.988 [D