2015-09-29T03:10:50.808Z,1443496250.808 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T03:10:50.811Z,1443496250.811 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T03:10:50.811Z,1443496250.811 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T03:10:50.812Z,1443496250.812 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T03:10:50.814Z,1443496250.814 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T03:10:50.815Z,1443496250.815 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T03:10:50.817Z,1443496250.817 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T03:10:50.830Z,1443496250.830 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T03:10:50.834Z,1443496250.834 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T03:10:50.835Z,1443496250.835 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T03:10:50.835Z,1443496250.835 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T03:10:50.838Z,1443496250.838 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T03:10:50.839Z,1443496250.839 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T03:10:50.841Z,1443496250.841 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T03:10:50.841Z,1443496250.841 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T03:10:50.845Z,1443496250.845 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T03:10:51.270Z,1443496251.270 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T03:10:51.272Z,1443496251.272 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T03:10:51.467Z,1443496251.467 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T03:10:51.469Z,1443496251.469 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T03:10:51.619Z,1443496251.619 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T03:10:51.620Z,1443496251.620 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T03:10:51.771Z,1443496251.771 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T03:10:51.772Z,1443496251.772 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T03:10:51.871Z,1443496251.871 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T03:10:52.103Z,1443496252.103 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T03:10:52.104Z,1443496252.104 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T03:10:52.203Z,1443496252.203 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T03:10:52.204Z,1443496252.204 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T03:10:52.534Z,1443496252.534 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T03:10:52.534Z,1443496252.534 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T03:10:52.959Z,1443496252.959 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T03:10:52.960Z,1443496252.960 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T03:10:53.338Z,1443496253.338 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T03:10:53.340Z,1443496253.340 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T03:10:53.980Z,1443496253.980 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T03:10:53.981Z,1443496253.981 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T03:10:54.234Z,1443496254.234 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T03:10:54.235Z,1443496254.235 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T03:10:54.355Z,1443496254.355 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T03:10:54.355Z,1443496254.355 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T03:10:54.930Z,1443496254.930 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T03:10:54.931Z,1443496254.931 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T03:10:55.063Z,1443496255.063 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T03:10:55.065Z,1443496255.065 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T03:10:55.065Z,1443496255.065 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T03:10:55.070Z,1443496255.070 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T03:10:55.150Z,1443496255.150 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T03:10:55.291Z,1443496255.291 [VerticalControl] Loaded
2015-09-29T03:10:55.292Z,1443496255.292 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T03:10:55.292Z,1443496255.292 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T03:10:55.382Z,1443496255.382 [HorizontalControl] Loaded
2015-09-29T03:10:55.382Z,1443496255.382 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T03:10:55.383Z,1443496255.383 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T03:10:55.389Z,1443496255.389 [SpeedControl] Loaded
2015-09-29T03:10:55.390Z,1443496255.390 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T03:10:55.390Z,1443496255.390 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T03:10:55.391Z,1443496255.391 [LoopControl] Loaded
2015-09-29T03:10:55.391Z,1443496255.391 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T03:10:55.392Z,1443496255.392 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T03:10:55.392Z,1443496255.392 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T03:10:55.568Z,1443496255.568 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T03:10:55.585Z,1443496255.585 [SBIT] Loaded
2015-09-29T03:10:55.586Z,1443496255.586 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T03:10:55.586Z,1443496255.586 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T03:10:55.618Z,1443496255.618 [IBIT] Loaded
2015-09-29T03:10:55.618Z,1443496255.618 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T03:10:55.620Z,1443496255.620 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T03:10:55.788Z,1443496255.788 [CBIT] Loaded
2015-09-29T03:10:55.788Z,1443496255.788 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T03:10:55.789Z,1443496255.789 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T03:10:55.789Z,1443496255.789 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T03:10:55.832Z,1443496255.832 [DepthRateCalculator] Loaded
2015-09-29T03:10:55.832Z,1443496255.832 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T03:10:55.838Z,1443496255.838 [PitchRateCalculator] Loaded
2015-09-29T03:10:55.838Z,1443496255.838 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T03:10:55.855Z,1443496255.855 [SpeedCalculator] Loaded
2015-09-29T03:10:55.855Z,1443496255.855 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T03:10:55.873Z,1443496255.873 [TempGradientCalculator] Loaded
2015-09-29T03:10:55.874Z,1443496255.874 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T03:10:55.896Z,1443496255.896 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T03:10:55.896Z,1443496255.896 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T03:10:55.902Z,1443496255.902 [YawRateCalculator] Loaded
2015-09-29T03:10:55.902Z,1443496255.902 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T03:10:55.903Z,1443496255.903 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T03:10:55.903Z,1443496255.903 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T03:10:56.029Z,1443496256.029 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T03:10:56.030Z,1443496256.030 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T03:10:56.030Z,1443496256.030 [StratificationFrontDetector] Loaded
2015-09-29T03:10:56.030Z,1443496256.030 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T03:10:56.031Z,1443496256.031 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T03:10:56.031Z,1443496256.031 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T03:10:56.350Z,1443496256.350 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T03:10:56.351Z,1443496256.351 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T03:10:56.490Z,1443496256.490 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T03:10:56.491Z,1443496256.491 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T03:10:56.559Z,1443496256.559 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T03:10:56.560Z,1443496256.560 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T03:10:56.578Z,1443496256.578 [NavChart] Loaded
2015-09-29T03:10:56.579Z,1443496256.579 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T03:10:56.584Z,1443496256.584 [UniversalFixResidualReporter] Loaded
2015-09-29T03:10:56.584Z,1443496256.584 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T03:10:56.585Z,1443496256.585 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T03:10:56.585Z,1443496256.585 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T03:10:56.596Z,1443496256.596 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T03:10:56.597Z,1443496256.597 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T03:10:56.921Z,1443496256.921 [CTD_NeilBrown] Loaded
2015-09-29T03:10:56.921Z,1443496256.921 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T03:10:56.926Z,1443496256.926 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T03:10:56.927Z,1443496256.927 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T03:10:56.940Z,1443496256.940 [ISUS] Loaded
2015-09-29T03:10:56.941Z,1443496256.941 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T03:10:56.960Z,1443496256.960 [PAR_Licor] Loaded
2015-09-29T03:10:56.960Z,1443496256.960 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T03:10:57.020Z,1443496257.020 [WetLabsBB2FL] Loaded
2015-09-29T03:10:57.020Z,1443496257.020 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T03:10:57.022Z,1443496257.022 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T03:10:57.023Z,1443496257.023 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T03:10:57.023Z,1443496257.023 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T03:10:57.024Z,1443496257.024 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T03:10:57.773Z,1443496257.773 [AHRS_sp3003D] Loaded
2015-09-29T03:10:57.773Z,1443496257.773 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T03:10:57.967Z,1443496257.967 [DataOverHttps] Loaded
2015-09-29T03:10:57.968Z,1443496257.968 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T03:10:57.987Z,1443496257.987 [Depth_Keller] Loaded
2015-09-29T03:10:57.987Z,1443496257.987 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T03:10:57.992Z,1443496257.992 [DropWeight] Loaded
2015-09-29T03:10:57.993Z,1443496257.993 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T03:10:58.159Z,1443496258.159 [DVL_micro] Loaded
2015-09-29T03:10:58.159Z,1443496258.159 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T03:10:58.274Z,1443496258.274 [NAL9602] Loaded
2015-09-29T03:10:58.275Z,1443496258.275 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T03:10:58.325Z,1443496258.325 [Onboard] Loaded
2015-09-29T03:10:58.325Z,1443496258.325 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T03:10:58.337Z,1443496258.337 [Radio_Surface] Loaded
2015-09-29T03:10:58.338Z,1443496258.338 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T03:10:58.342Z,1443496258.342 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T03:10:58.343Z,1443496258.343 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T03:10:58.512Z,1443496258.512 [DAT] Loaded
2015-09-29T03:10:58.512Z,1443496258.512 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T03:10:58.520Z,1443496258.520 [SCPI] Loaded
2015-09-29T03:10:58.520Z,1443496258.520 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T03:10:58.521Z,1443496258.521 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T03:10:58.521Z,1443496258.521 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T03:10:58.666Z,1443496258.666 [BuoyancyServo] Loaded
2015-09-29T03:10:58.666Z,1443496258.666 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T03:10:58.679Z,1443496258.679 [ElevatorServo] Loaded
2015-09-29T03:10:58.680Z,1443496258.680 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T03:10:58.692Z,1443496258.692 [MassServo] Loaded
2015-09-29T03:10:58.692Z,1443496258.692 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T03:10:58.709Z,1443496258.709 [RudderServo] Loaded
2015-09-29T03:10:58.709Z,1443496258.709 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T03:10:58.721Z,1443496258.721 [ThrusterServo] Loaded
2015-09-29T03:10:58.721Z,1443496258.721 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T03:10:58.722Z,1443496258.722 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T03:10:58.722Z,1443496258.722 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T03:10:58.944Z,1443496258.944 [InternalSim] Loaded
2015-09-29T03:10:58.944Z,1443496258.944 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T03:10:58.945Z,1443496258.945 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T03:10:58.945Z,1443496258.945 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T03:10:58.990Z,1443496258.990 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T03:10:58.995Z,1443496258.995 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T03:10:58.995Z,1443496258.995 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T03:10:59.006Z,1443496259.006 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T03:10:59.010Z,1443496259.010 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T03:10:59.011Z,1443496259.011 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T03:10:59.016Z,1443496259.016 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T03:10:59.016Z,1443496259.016 [Supervisor](DEBUG): Running supervisor.
2015-09-29T03:10:59.016Z,1443496259.016 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T03:10:59.023Z,1443496259.023 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T03:10:59.023Z,1443496259.023 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T03:10:59.024Z,1443496259.024 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T03:10:59.026Z,1443496259.026 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T03:10:59.027Z,1443496259.027 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T03:10:59.027Z,1443496259.027 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T03:10:59.028Z,1443496259.028 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T03:10:59.028Z,1443496259.028 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T03:10:59.030Z,1443496259.030 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T03:10:59.030Z,1443496259.030 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T03:10:59.031Z,1443496259.031 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T03:10:59.031Z,1443496259.031 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T03:10:59.032Z,1443496259.032 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T03:10:59.032Z,1443496259.032 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T03:10:59.033Z,1443496259.033 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T03:10:59.033Z,1443496259.033 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T03:10:59.033Z,1443496259.033 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T03:10:59.033Z,1443496259.033 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T03:10:59.034Z,1443496259.034 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T03:10:59.034Z,1443496259.034 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T03:10:59.035Z,1443496259.035 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T03:10:59.036Z,1443496259.036 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T03:10:59.036Z,1443496259.036 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T03:10:59.037Z,1443496259.037 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T03:10:59.037Z,1443496259.037 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T03:10:59.037Z,1443496259.037 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T03:10:59.038Z,1443496259.038 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T03:10:59.038Z,1443496259.038 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T03:10:59.039Z,1443496259.039 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T03:10:59.044Z,1443496259.044 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T03:10:59.075Z,1443496259.075 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T03:10:59.171Z,1443496259.171 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T03:10:59.214Z,1443496259.214 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T03:10:59.222Z,1443496259.222 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T03:10:59.236Z,1443496259.236 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T03:10:59.253Z,1443496259.253 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T03:10:59.268Z,1443496259.268 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T03:10:59.270Z,1443496259.270 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T03:10:59.270Z,1443496259.270 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T03:10:59.271Z,1443496259.271 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T03:10:59.271Z,1443496259.271 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T03:10:59.271Z,1443496259.271 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T03:10:59.271Z,1443496259.271 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T03:10:59.272Z,1443496259.272 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T03:10:59.272Z,1443496259.272 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T03:10:59.275Z,1443496259.275 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T03:10:59.324Z,1443496259.324 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T03:10:59.325Z,1443496259.325 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T03:10:59.411Z,1443496259.411 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T03:10:59.412Z,1443496259.412 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T03:10:59.438Z,1443496259.438 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T03:10:59.441Z,1443496259.441 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T03:10:59.478Z,1443496259.478 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T03:10:59.482Z,1443496259.482 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T03:10:59.487Z,1443496259.487 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T03:10:59.718Z,1443496259.718 [DVL_micro](INFO): Initializing
2015-09-29T03:10:59.879Z,1443496259.879 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:10:59.898Z,1443496259.898 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:11:00.010Z,1443496260.010 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T03:11:00.019Z,1443496260.019 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T03:11:00.038Z,1443496260.038 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T03:11:00.044Z,1443496260.044 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T03:11:00.059Z,1443496260.059 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T03:11:00.316Z,1443496260.316 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:11:00.317Z,1443496260.317 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T03:11:09.266Z,1443496269.266 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:09.594Z,1443496269.594 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:09.738Z,1443496269.738 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:10.138Z,1443496270.138 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T03:11:10.142Z,1443496270.142 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:10.536Z,1443496270.536 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:10.936Z,1443496270.936 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:11.336Z,1443496271.336 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:11.735Z,1443496271.735 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:12.135Z,1443496272.135 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:12.536Z,1443496272.536 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:12.935Z,1443496272.935 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:13.335Z,1443496273.335 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:13.735Z,1443496273.735 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:14.136Z,1443496274.136 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:14.534Z,1443496274.534 [NAL9602](INFO): No messages in MT queue
2015-09-29T03:11:14.535Z,1443496274.535 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:14.936Z,1443496274.936 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:15.338Z,1443496275.338 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:15.736Z,1443496275.736 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:16.145Z,1443496276.145 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:16.545Z,1443496276.545 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:16.945Z,1443496276.945 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:17.345Z,1443496277.345 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:17.745Z,1443496277.745 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:18.144Z,1443496278.144 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:18.544Z,1443496278.544 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:18.944Z,1443496278.944 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:19.345Z,1443496279.345 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:19.745Z,1443496279.745 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:19.772Z,1443496279.772 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T03:11:20.145Z,1443496280.145 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:20.546Z,1443496280.546 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:20.945Z,1443496280.945 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:21.346Z,1443496281.346 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:21.736Z,1443496281.736 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:22.145Z,1443496282.145 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:22.536Z,1443496282.536 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:22.935Z,1443496282.935 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:23.335Z,1443496283.335 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T03:11:23.736Z,1443496283.736 [D