2015-09-29T02:55:01.263Z,1443495301.263 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T02:55:01.266Z,1443495301.266 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T02:55:01.267Z,1443495301.267 [SyncHandler](INFO): Protected caller Thread ID is 763
2015-09-29T02:55:01.267Z,1443495301.267 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T02:55:01.272Z,1443495301.272 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T02:55:01.272Z,1443495301.272 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T02:55:01.275Z,1443495301.275 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T02:55:01.287Z,1443495301.287 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T02:55:01.292Z,1443495301.292 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T02:55:01.292Z,1443495301.292 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 765
2015-09-29T02:55:01.293Z,1443495301.293 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T02:55:01.296Z,1443495301.296 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T02:55:01.296Z,1443495301.296 [logger ThreadHandler](INFO): Protected caller Thread ID is 766
2015-09-29T02:55:01.298Z,1443495301.298 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T02:55:01.299Z,1443495301.299 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T02:55:01.302Z,1443495301.302 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T02:55:01.713Z,1443495301.713 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T02:55:01.715Z,1443495301.715 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T02:55:01.916Z,1443495301.916 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T02:55:01.918Z,1443495301.918 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T02:55:02.072Z,1443495302.072 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T02:55:02.073Z,1443495302.073 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T02:55:02.224Z,1443495302.224 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T02:55:02.225Z,1443495302.225 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T02:55:02.321Z,1443495302.321 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T02:55:02.548Z,1443495302.548 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T02:55:02.549Z,1443495302.549 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T02:55:02.648Z,1443495302.648 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T02:55:02.649Z,1443495302.649 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T02:55:02.973Z,1443495302.973 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T02:55:02.973Z,1443495302.973 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T02:55:03.387Z,1443495303.387 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T02:55:03.388Z,1443495303.388 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T02:55:03.755Z,1443495303.755 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T02:55:03.757Z,1443495303.757 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T02:55:04.385Z,1443495304.385 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T02:55:04.386Z,1443495304.386 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T02:55:04.629Z,1443495304.629 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T02:55:04.629Z,1443495304.629 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T02:55:04.755Z,1443495304.755 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T02:55:04.756Z,1443495304.756 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T02:55:05.321Z,1443495305.321 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T02:55:05.322Z,1443495305.322 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T02:55:05.447Z,1443495305.447 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T02:55:05.449Z,1443495305.449 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T02:55:05.449Z,1443495305.449 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T02:55:05.454Z,1443495305.454 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T02:55:05.531Z,1443495305.531 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T02:55:05.674Z,1443495305.674 [VerticalControl] Loaded
2015-09-29T02:55:05.674Z,1443495305.674 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T02:55:05.675Z,1443495305.675 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T02:55:05.765Z,1443495305.765 [HorizontalControl] Loaded
2015-09-29T02:55:05.766Z,1443495305.766 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T02:55:05.766Z,1443495305.766 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T02:55:05.773Z,1443495305.773 [SpeedControl] Loaded
2015-09-29T02:55:05.773Z,1443495305.773 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T02:55:05.773Z,1443495305.773 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T02:55:05.774Z,1443495305.774 [LoopControl] Loaded
2015-09-29T02:55:05.774Z,1443495305.774 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T02:55:05.775Z,1443495305.775 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T02:55:05.776Z,1443495305.776 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T02:55:05.946Z,1443495305.946 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T02:55:05.963Z,1443495305.963 [SBIT] Loaded
2015-09-29T02:55:05.963Z,1443495305.963 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T02:55:05.964Z,1443495305.964 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T02:55:06.004Z,1443495306.004 [IBIT] Loaded
2015-09-29T02:55:06.004Z,1443495306.004 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T02:55:06.006Z,1443495306.006 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T02:55:06.167Z,1443495306.167 [CBIT] Loaded
2015-09-29T02:55:06.167Z,1443495306.167 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T02:55:06.168Z,1443495306.168 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T02:55:06.168Z,1443495306.168 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T02:55:06.207Z,1443495306.207 [DepthRateCalculator] Loaded
2015-09-29T02:55:06.211Z,1443495306.211 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T02:55:06.217Z,1443495306.217 [PitchRateCalculator] Loaded
2015-09-29T02:55:06.218Z,1443495306.218 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T02:55:06.230Z,1443495306.230 [SpeedCalculator] Loaded
2015-09-29T02:55:06.230Z,1443495306.230 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T02:55:06.249Z,1443495306.249 [TempGradientCalculator] Loaded
2015-09-29T02:55:06.249Z,1443495306.249 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T02:55:06.271Z,1443495306.271 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T02:55:06.272Z,1443495306.272 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T02:55:06.281Z,1443495306.281 [YawRateCalculator] Loaded
2015-09-29T02:55:06.282Z,1443495306.282 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T02:55:06.282Z,1443495306.282 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T02:55:06.283Z,1443495306.283 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T02:55:06.409Z,1443495306.409 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T02:55:06.410Z,1443495306.410 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T02:55:06.410Z,1443495306.410 [StratificationFrontDetector] Loaded
2015-09-29T02:55:06.410Z,1443495306.410 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T02:55:06.411Z,1443495306.411 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T02:55:06.411Z,1443495306.411 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T02:55:06.716Z,1443495306.716 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T02:55:06.717Z,1443495306.717 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T02:55:06.856Z,1443495306.856 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T02:55:06.856Z,1443495306.856 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T02:55:06.921Z,1443495306.921 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T02:55:06.921Z,1443495306.921 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T02:55:06.944Z,1443495306.944 [NavChart] Loaded
2015-09-29T02:55:06.944Z,1443495306.944 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T02:55:06.950Z,1443495306.950 [UniversalFixResidualReporter] Loaded
2015-09-29T02:55:06.950Z,1443495306.950 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T02:55:06.950Z,1443495306.950 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T02:55:06.951Z,1443495306.951 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T02:55:06.960Z,1443495306.960 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T02:55:06.961Z,1443495306.961 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T02:55:07.278Z,1443495307.278 [CTD_NeilBrown] Loaded
2015-09-29T02:55:07.278Z,1443495307.278 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T02:55:07.284Z,1443495307.284 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T02:55:07.284Z,1443495307.284 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T02:55:07.298Z,1443495307.298 [ISUS] Loaded
2015-09-29T02:55:07.298Z,1443495307.298 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T02:55:07.318Z,1443495307.318 [PAR_Licor] Loaded
2015-09-29T02:55:07.318Z,1443495307.318 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T02:55:07.378Z,1443495307.378 [WetLabsBB2FL] Loaded
2015-09-29T02:55:07.378Z,1443495307.378 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T02:55:07.380Z,1443495307.380 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T02:55:07.380Z,1443495307.380 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T02:55:07.380Z,1443495307.380 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T02:55:07.381Z,1443495307.381 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T02:55:08.125Z,1443495308.125 [AHRS_sp3003D] Loaded
2015-09-29T02:55:08.126Z,1443495308.126 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T02:55:08.325Z,1443495308.325 [DataOverHttps] Loaded
2015-09-29T02:55:08.325Z,1443495308.325 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T02:55:08.344Z,1443495308.344 [Depth_Keller] Loaded
2015-09-29T02:55:08.344Z,1443495308.344 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T02:55:08.349Z,1443495308.349 [DropWeight] Loaded
2015-09-29T02:55:08.350Z,1443495308.350 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T02:55:08.511Z,1443495308.511 [DVL_micro] Loaded
2015-09-29T02:55:08.511Z,1443495308.511 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T02:55:08.626Z,1443495308.626 [NAL9602] Loaded
2015-09-29T02:55:08.627Z,1443495308.627 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T02:55:08.681Z,1443495308.681 [Onboard] Loaded
2015-09-29T02:55:08.681Z,1443495308.681 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T02:55:08.693Z,1443495308.693 [Radio_Surface] Loaded
2015-09-29T02:55:08.694Z,1443495308.694 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T02:55:08.696Z,1443495308.696 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T02:55:08.696Z,1443495308.696 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 814
2015-09-29T02:55:08.865Z,1443495308.865 [DAT] Loaded
2015-09-29T02:55:08.866Z,1443495308.866 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T02:55:08.873Z,1443495308.873 [SCPI] Loaded
2015-09-29T02:55:08.873Z,1443495308.873 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T02:55:08.874Z,1443495308.874 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T02:55:08.875Z,1443495308.875 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T02:55:09.014Z,1443495309.014 [BuoyancyServo] Loaded
2015-09-29T02:55:09.015Z,1443495309.015 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T02:55:09.029Z,1443495309.029 [ElevatorServo] Loaded
2015-09-29T02:55:09.029Z,1443495309.029 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T02:55:09.046Z,1443495309.046 [MassServo] Loaded
2015-09-29T02:55:09.046Z,1443495309.046 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T02:55:09.059Z,1443495309.059 [RudderServo] Loaded
2015-09-29T02:55:09.059Z,1443495309.059 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T02:55:09.071Z,1443495309.071 [ThrusterServo] Loaded
2015-09-29T02:55:09.071Z,1443495309.071 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T02:55:09.072Z,1443495309.072 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T02:55:09.072Z,1443495309.072 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T02:55:09.285Z,1443495309.285 [InternalSim] Loaded
2015-09-29T02:55:09.286Z,1443495309.286 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T02:55:09.286Z,1443495309.286 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T02:55:09.287Z,1443495309.287 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T02:55:09.332Z,1443495309.332 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T02:55:09.336Z,1443495309.336 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T02:55:09.337Z,1443495309.337 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T02:55:09.343Z,1443495309.343 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T02:55:09.348Z,1443495309.348 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T02:55:09.348Z,1443495309.348 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 815
2015-09-29T02:55:09.353Z,1443495309.353 [Supervisor](INFO): Main Thread ID is 762
2015-09-29T02:55:09.353Z,1443495309.353 [Supervisor](DEBUG): Running supervisor.
2015-09-29T02:55:09.354Z,1443495309.354 [CommandLine ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T02:55:09.360Z,1443495309.360 [controlThread ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T02:55:09.360Z,1443495309.360 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T02:55:09.361Z,1443495309.361 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T02:55:09.363Z,1443495309.363 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T02:55:09.364Z,1443495309.364 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T02:55:09.365Z,1443495309.365 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T02:55:09.365Z,1443495309.365 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T02:55:09.365Z,1443495309.365 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T02:55:09.367Z,1443495309.367 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T02:55:09.367Z,1443495309.367 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T02:55:09.368Z,1443495309.368 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T02:55:09.369Z,1443495309.369 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T02:55:09.369Z,1443495309.369 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T02:55:09.370Z,1443495309.370 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T02:55:09.370Z,1443495309.370 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T02:55:09.370Z,1443495309.370 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T02:55:09.371Z,1443495309.371 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T02:55:09.371Z,1443495309.371 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T02:55:09.371Z,1443495309.371 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T02:55:09.372Z,1443495309.372 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T02:55:09.372Z,1443495309.372 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T02:55:09.373Z,1443495309.373 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T02:55:09.374Z,1443495309.374 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T02:55:09.374Z,1443495309.374 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T02:55:09.374Z,1443495309.374 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T02:55:09.375Z,1443495309.375 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T02:55:09.375Z,1443495309.375 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T02:55:09.376Z,1443495309.376 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T02:55:09.376Z,1443495309.376 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T02:55:09.381Z,1443495309.381 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T02:55:09.416Z,1443495309.416 [logger ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T02:55:09.504Z,1443495309.504 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T02:55:09.513Z,1443495309.513 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T02:55:09.577Z,1443495309.577 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 821
2015-09-29T02:55:09.604Z,1443495309.604 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 822
2015-09-29T02:55:09.606Z,1443495309.606 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T02:55:09.634Z,1443495309.634 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T02:55:09.636Z,1443495309.636 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T02:55:09.636Z,1443495309.636 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T02:55:09.637Z,1443495309.637 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T02:55:09.637Z,1443495309.637 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T02:55:09.637Z,1443495309.637 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T02:55:09.637Z,1443495309.637 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T02:55:09.638Z,1443495309.638 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T02:55:09.638Z,1443495309.638 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T02:55:09.660Z,1443495309.660 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T02:55:09.714Z,1443495309.714 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T02:55:09.714Z,1443495309.714 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T02:55:09.777Z,1443495309.777 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T02:55:09.779Z,1443495309.779 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T02:55:09.839Z,1443495309.839 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T02:55:09.842Z,1443495309.842 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T02:55:09.864Z,1443495309.864 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T02:55:09.867Z,1443495309.867 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T02:55:09.894Z,1443495309.894 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T02:55:10.108Z,1443495310.108 [DVL_micro](INFO): Initializing
2015-09-29T02:55:10.268Z,1443495310.268 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:55:10.276Z,1443495310.276 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:55:10.392Z,1443495310.392 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T02:55:10.408Z,1443495310.408 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T02:55:10.420Z,1443495310.420 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T02:55:10.432Z,1443495310.432 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T02:55:10.440Z,1443495310.440 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T02:55:10.673Z,1443495310.673 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:55:10.674Z,1443495310.674 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:55:19.711Z,1443495319.711 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:20.052Z,1443495320.052 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:20.175Z,1443495320.175 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:20.567Z,1443495320.567 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T02:55:20.570Z,1443495320.570 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:20.965Z,1443495320.965 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:21.365Z,1443495321.365 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:21.766Z,1443495321.766 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:22.165Z,1443495322.165 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:22.564Z,1443495322.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:22.964Z,1443495322.964 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:23.377Z,1443495323.377 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:23.765Z,1443495323.765 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:24.164Z,1443495324.164 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:24.573Z,1443495324.573 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:24.963Z,1443495324.963 [NAL9602](INFO): No messages in MT queue
2015-09-29T02:55:24.964Z,1443495324.964 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:25.364Z,1443495325.364 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:25.766Z,1443495325.766 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:26.164Z,1443495326.164 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:26.564Z,1443495326.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:26.964Z,1443495326.964 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:27.365Z,1443495327.365 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:27.764Z,1443495327.764 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:28.169Z,1443495328.169 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:28.564Z,1443495328.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:28.964Z,1443495328.964 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:29.364Z,1443495329.364 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:29.765Z,1443495329.765 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:29.803Z,1443495329.803 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T02:55:30.164Z,1443495330.164 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:30.564Z,1443495330.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:30.967Z,1443495330.967 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:31.395Z,1443495331.395 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:31.764Z,1443495331.764 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:32.165Z,1443495332.165 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:32.564Z,1443495332.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:32.965Z,1443495332.965 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:33.364Z,1443495333.364 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:33.766Z,1443495333.766 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:55:34.175Z,1443495334.175 [D