2015-09-29T02:47:14.894Z,1443494834.894 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T02:47:14.906Z,1443494834.906 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T02:47:14.907Z,1443494834.907 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T02:47:14.907Z,1443494834.907 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T02:47:14.918Z,1443494834.918 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T02:47:14.919Z,1443494834.919 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T02:47:14.922Z,1443494834.922 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T02:47:14.945Z,1443494834.945 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T02:47:14.970Z,1443494834.970 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T02:47:14.971Z,1443494834.971 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T02:47:14.972Z,1443494834.972 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T02:47:14.986Z,1443494834.986 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T02:47:14.987Z,1443494834.987 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T02:47:14.989Z,1443494834.989 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T02:47:14.989Z,1443494834.989 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T02:47:15.010Z,1443494835.010 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T02:47:15.746Z,1443494835.746 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T02:47:15.755Z,1443494835.755 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T02:47:16.107Z,1443494836.107 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T02:47:16.109Z,1443494836.109 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T02:47:16.255Z,1443494836.255 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T02:47:16.256Z,1443494836.256 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T02:47:16.403Z,1443494836.403 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T02:47:16.404Z,1443494836.404 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T02:47:16.498Z,1443494836.498 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T02:47:16.719Z,1443494836.719 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T02:47:16.720Z,1443494836.720 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T02:47:16.815Z,1443494836.815 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T02:47:16.816Z,1443494836.816 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T02:47:17.131Z,1443494837.131 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T02:47:17.132Z,1443494837.132 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T02:47:17.531Z,1443494837.531 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T02:47:17.532Z,1443494837.532 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T02:47:17.883Z,1443494837.883 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T02:47:17.885Z,1443494837.885 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T02:47:18.476Z,1443494838.476 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T02:47:18.477Z,1443494838.477 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T02:47:18.707Z,1443494838.707 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T02:47:18.708Z,1443494838.708 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T02:47:18.823Z,1443494838.823 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T02:47:18.824Z,1443494838.824 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T02:47:19.336Z,1443494839.336 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T02:47:19.336Z,1443494839.336 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T02:47:19.462Z,1443494839.462 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T02:47:19.464Z,1443494839.464 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T02:47:19.465Z,1443494839.465 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T02:47:19.469Z,1443494839.469 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T02:47:19.544Z,1443494839.544 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T02:47:19.680Z,1443494839.680 [VerticalControl] Loaded
2015-09-29T02:47:19.680Z,1443494839.680 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T02:47:19.681Z,1443494839.681 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T02:47:19.763Z,1443494839.763 [HorizontalControl] Loaded
2015-09-29T02:47:19.763Z,1443494839.763 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T02:47:19.764Z,1443494839.764 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T02:47:19.774Z,1443494839.774 [SpeedControl] Loaded
2015-09-29T02:47:19.774Z,1443494839.774 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T02:47:19.775Z,1443494839.775 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T02:47:19.776Z,1443494839.776 [LoopControl] Loaded
2015-09-29T02:47:19.776Z,1443494839.776 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T02:47:19.777Z,1443494839.777 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T02:47:19.777Z,1443494839.777 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T02:47:19.936Z,1443494839.936 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T02:47:19.952Z,1443494839.952 [SBIT] Loaded
2015-09-29T02:47:19.953Z,1443494839.953 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T02:47:19.954Z,1443494839.954 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T02:47:19.988Z,1443494839.988 [IBIT] Loaded
2015-09-29T02:47:19.988Z,1443494839.988 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T02:47:19.990Z,1443494839.990 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T02:47:20.147Z,1443494840.147 [CBIT] Loaded
2015-09-29T02:47:20.148Z,1443494840.148 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T02:47:20.148Z,1443494840.148 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T02:47:20.149Z,1443494840.149 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T02:47:20.190Z,1443494840.190 [DepthRateCalculator] Loaded
2015-09-29T02:47:20.190Z,1443494840.190 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T02:47:20.196Z,1443494840.196 [PitchRateCalculator] Loaded
2015-09-29T02:47:20.196Z,1443494840.196 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T02:47:20.212Z,1443494840.212 [SpeedCalculator] Loaded
2015-09-29T02:47:20.213Z,1443494840.213 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T02:47:20.230Z,1443494840.230 [TempGradientCalculator] Loaded
2015-09-29T02:47:20.230Z,1443494840.230 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T02:47:20.252Z,1443494840.252 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T02:47:20.252Z,1443494840.252 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T02:47:20.258Z,1443494840.258 [YawRateCalculator] Loaded
2015-09-29T02:47:20.258Z,1443494840.258 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T02:47:20.258Z,1443494840.258 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T02:47:20.259Z,1443494840.259 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T02:47:20.381Z,1443494840.381 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T02:47:20.381Z,1443494840.381 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T02:47:20.381Z,1443494840.381 [StratificationFrontDetector] Loaded
2015-09-29T02:47:20.381Z,1443494840.381 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T02:47:20.382Z,1443494840.382 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T02:47:20.383Z,1443494840.383 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T02:47:20.679Z,1443494840.679 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T02:47:20.679Z,1443494840.679 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T02:47:20.808Z,1443494840.808 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T02:47:20.809Z,1443494840.809 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T02:47:20.874Z,1443494840.874 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T02:47:20.874Z,1443494840.874 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T02:47:20.892Z,1443494840.892 [NavChart] Loaded
2015-09-29T02:47:20.892Z,1443494840.892 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T02:47:20.898Z,1443494840.898 [UniversalFixResidualReporter] Loaded
2015-09-29T02:47:20.898Z,1443494840.898 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T02:47:20.898Z,1443494840.898 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T02:47:20.899Z,1443494840.899 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T02:47:20.908Z,1443494840.908 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T02:47:20.909Z,1443494840.909 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T02:47:21.212Z,1443494841.212 [CTD_NeilBrown] Loaded
2015-09-29T02:47:21.212Z,1443494841.212 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T02:47:21.214Z,1443494841.214 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T02:47:21.215Z,1443494841.215 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T02:47:21.228Z,1443494841.228 [ISUS] Loaded
2015-09-29T02:47:21.228Z,1443494841.228 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T02:47:21.243Z,1443494841.243 [PAR_Licor] Loaded
2015-09-29T02:47:21.243Z,1443494841.243 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T02:47:21.304Z,1443494841.304 [WetLabsBB2FL] Loaded
2015-09-29T02:47:21.304Z,1443494841.304 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T02:47:21.306Z,1443494841.306 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T02:47:21.307Z,1443494841.307 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T02:47:21.307Z,1443494841.307 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T02:47:21.308Z,1443494841.308 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T02:47:22.077Z,1443494842.077 [AHRS_sp3003D] Loaded
2015-09-29T02:47:22.077Z,1443494842.077 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T02:47:22.272Z,1443494842.272 [DataOverHttps] Loaded
2015-09-29T02:47:22.272Z,1443494842.272 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T02:47:22.286Z,1443494842.286 [Depth_Keller] Loaded
2015-09-29T02:47:22.286Z,1443494842.286 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T02:47:22.291Z,1443494842.291 [DropWeight] Loaded
2015-09-29T02:47:22.292Z,1443494842.292 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T02:47:22.448Z,1443494842.448 [DVL_micro] Loaded
2015-09-29T02:47:22.449Z,1443494842.449 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T02:47:22.554Z,1443494842.554 [NAL9602] Loaded
2015-09-29T02:47:22.554Z,1443494842.554 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T02:47:22.606Z,1443494842.606 [Onboard] Loaded
2015-09-29T02:47:22.606Z,1443494842.606 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T02:47:22.618Z,1443494842.618 [Radio_Surface] Loaded
2015-09-29T02:47:22.618Z,1443494842.618 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T02:47:22.622Z,1443494842.622 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T02:47:22.623Z,1443494842.623 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T02:47:22.784Z,1443494842.784 [DAT] Loaded
2015-09-29T02:47:22.785Z,1443494842.785 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T02:47:22.792Z,1443494842.792 [SCPI] Loaded
2015-09-29T02:47:22.792Z,1443494842.792 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T02:47:22.793Z,1443494842.793 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T02:47:22.793Z,1443494842.793 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T02:47:22.929Z,1443494842.929 [BuoyancyServo] Loaded
2015-09-29T02:47:22.930Z,1443494842.930 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T02:47:22.943Z,1443494842.943 [ElevatorServo] Loaded
2015-09-29T02:47:22.943Z,1443494842.943 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T02:47:22.955Z,1443494842.955 [MassServo] Loaded
2015-09-29T02:47:22.956Z,1443494842.956 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T02:47:22.972Z,1443494842.972 [RudderServo] Loaded
2015-09-29T02:47:22.972Z,1443494842.972 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T02:47:22.984Z,1443494842.984 [ThrusterServo] Loaded
2015-09-29T02:47:22.984Z,1443494842.984 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T02:47:22.985Z,1443494842.985 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T02:47:22.985Z,1443494842.985 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T02:47:23.185Z,1443494843.185 [InternalSim] Loaded
2015-09-29T02:47:23.185Z,1443494843.185 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T02:47:23.186Z,1443494843.186 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T02:47:23.187Z,1443494843.187 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T02:47:23.230Z,1443494843.230 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T02:47:23.234Z,1443494843.234 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T02:47:23.235Z,1443494843.235 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T02:47:23.242Z,1443494843.242 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T02:47:23.246Z,1443494843.246 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T02:47:23.247Z,1443494843.247 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T02:47:23.252Z,1443494843.252 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T02:47:23.252Z,1443494843.252 [Supervisor](DEBUG): Running supervisor.
2015-09-29T02:47:23.252Z,1443494843.252 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T02:47:23.259Z,1443494843.259 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T02:47:23.259Z,1443494843.259 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T02:47:23.260Z,1443494843.260 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T02:47:23.262Z,1443494843.262 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T02:47:23.263Z,1443494843.263 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T02:47:23.263Z,1443494843.263 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T02:47:23.264Z,1443494843.264 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T02:47:23.264Z,1443494843.264 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T02:47:23.266Z,1443494843.266 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T02:47:23.266Z,1443494843.266 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T02:47:23.267Z,1443494843.267 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T02:47:23.267Z,1443494843.267 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T02:47:23.268Z,1443494843.268 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T02:47:23.268Z,1443494843.268 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T02:47:23.269Z,1443494843.269 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T02:47:23.269Z,1443494843.269 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T02:47:23.269Z,1443494843.269 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T02:47:23.270Z,1443494843.270 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T02:47:23.270Z,1443494843.270 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T02:47:23.270Z,1443494843.270 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T02:47:23.271Z,1443494843.271 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T02:47:23.272Z,1443494843.272 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T02:47:23.272Z,1443494843.272 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T02:47:23.273Z,1443494843.273 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T02:47:23.273Z,1443494843.273 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T02:47:23.273Z,1443494843.273 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T02:47:23.274Z,1443494843.274 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T02:47:23.274Z,1443494843.274 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T02:47:23.275Z,1443494843.275 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T02:47:23.279Z,1443494843.279 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T02:47:23.316Z,1443494843.316 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T02:47:23.364Z,1443494843.364 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T02:47:23.371Z,1443494843.371 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T02:47:23.413Z,1443494843.413 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T02:47:23.430Z,1443494843.430 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T02:47:23.451Z,1443494843.451 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T02:47:23.499Z,1443494843.499 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T02:47:23.503Z,1443494843.503 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T02:47:23.503Z,1443494843.503 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T02:47:23.503Z,1443494843.503 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T02:47:23.504Z,1443494843.504 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T02:47:23.504Z,1443494843.504 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T02:47:23.504Z,1443494843.504 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T02:47:23.504Z,1443494843.504 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T02:47:23.505Z,1443494843.505 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T02:47:23.561Z,1443494843.561 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T02:47:23.606Z,1443494843.606 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T02:47:23.607Z,1443494843.607 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T02:47:23.676Z,1443494843.676 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T02:47:23.677Z,1443494843.677 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T02:47:23.731Z,1443494843.731 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T02:47:23.734Z,1443494843.734 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T02:47:23.752Z,1443494843.752 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T02:47:23.755Z,1443494843.755 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T02:47:23.768Z,1443494843.768 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T02:47:23.980Z,1443494843.980 [DVL_micro](INFO): Initializing
2015-09-29T02:47:24.127Z,1443494844.127 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:47:24.155Z,1443494844.155 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:47:24.263Z,1443494844.263 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T02:47:24.277Z,1443494844.277 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T02:47:24.302Z,1443494844.302 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T02:47:24.314Z,1443494844.314 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T02:47:24.334Z,1443494844.334 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T02:47:24.576Z,1443494844.576 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:47:24.577Z,1443494844.577 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:47:33.616Z,1443494853.616 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:47:33.953Z,1443494853.953 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:47:34.098Z,1443494854.098 [DAT](ERROR): Could not read simulated DAT measurements from SimS