2015-09-29T02:31:17.873Z,1443493877.873 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T02:31:17.876Z,1443493877.876 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T02:31:17.876Z,1443493877.876 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T02:31:17.877Z,1443493877.877 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T02:31:17.879Z,1443493877.879 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T02:31:17.879Z,1443493877.879 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T02:31:17.882Z,1443493877.882 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T02:31:17.894Z,1443493877.894 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T02:31:17.899Z,1443493877.899 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T02:31:17.899Z,1443493877.899 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T02:31:17.900Z,1443493877.900 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T02:31:17.903Z,1443493877.903 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T02:31:17.903Z,1443493877.903 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T02:31:17.905Z,1443493877.905 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T02:31:17.906Z,1443493877.906 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T02:31:17.909Z,1443493877.909 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T02:31:18.304Z,1443493878.304 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T02:31:18.306Z,1443493878.306 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T02:31:18.498Z,1443493878.498 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T02:31:18.500Z,1443493878.500 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T02:31:18.644Z,1443493878.644 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T02:31:18.644Z,1443493878.644 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T02:31:18.796Z,1443493878.796 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T02:31:18.796Z,1443493878.796 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T02:31:18.891Z,1443493878.891 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T02:31:19.112Z,1443493879.112 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T02:31:19.112Z,1443493879.112 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T02:31:19.207Z,1443493879.207 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T02:31:19.208Z,1443493879.208 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T02:31:19.524Z,1443493879.524 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T02:31:19.525Z,1443493879.525 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T02:31:19.924Z,1443493879.924 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T02:31:19.925Z,1443493879.925 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T02:31:20.276Z,1443493880.276 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T02:31:20.278Z,1443493880.278 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T02:31:20.876Z,1443493880.876 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T02:31:20.877Z,1443493880.877 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T02:31:21.110Z,1443493881.110 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T02:31:21.111Z,1443493881.111 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T02:31:21.224Z,1443493881.224 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T02:31:21.224Z,1443493881.224 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T02:31:21.739Z,1443493881.739 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T02:31:21.740Z,1443493881.740 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T02:31:21.900Z,1443493881.900 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T02:31:21.902Z,1443493881.902 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T02:31:21.902Z,1443493881.902 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T02:31:21.906Z,1443493881.906 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T02:31:21.980Z,1443493881.980 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T02:31:22.116Z,1443493882.116 [VerticalControl] Loaded
2015-09-29T02:31:22.117Z,1443493882.117 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T02:31:22.117Z,1443493882.117 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T02:31:22.199Z,1443493882.199 [HorizontalControl] Loaded
2015-09-29T02:31:22.199Z,1443493882.199 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T02:31:22.200Z,1443493882.200 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T02:31:22.206Z,1443493882.206 [SpeedControl] Loaded
2015-09-29T02:31:22.206Z,1443493882.206 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T02:31:22.207Z,1443493882.207 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T02:31:22.208Z,1443493882.208 [LoopControl] Loaded
2015-09-29T02:31:22.208Z,1443493882.208 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T02:31:22.208Z,1443493882.208 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T02:31:22.209Z,1443493882.209 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T02:31:22.370Z,1443493882.370 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T02:31:22.387Z,1443493882.387 [SBIT] Loaded
2015-09-29T02:31:22.387Z,1443493882.387 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T02:31:22.388Z,1443493882.388 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T02:31:22.418Z,1443493882.418 [IBIT] Loaded
2015-09-29T02:31:22.418Z,1443493882.418 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T02:31:22.424Z,1443493882.424 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T02:31:22.581Z,1443493882.581 [CBIT] Loaded
2015-09-29T02:31:22.582Z,1443493882.582 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T02:31:22.582Z,1443493882.582 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T02:31:22.583Z,1443493882.583 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T02:31:22.620Z,1443493882.620 [DepthRateCalculator] Loaded
2015-09-29T02:31:22.621Z,1443493882.621 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T02:31:22.630Z,1443493882.630 [PitchRateCalculator] Loaded
2015-09-29T02:31:22.631Z,1443493882.631 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T02:31:22.642Z,1443493882.642 [SpeedCalculator] Loaded
2015-09-29T02:31:22.643Z,1443493882.643 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T02:31:22.660Z,1443493882.660 [TempGradientCalculator] Loaded
2015-09-29T02:31:22.660Z,1443493882.660 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T02:31:22.682Z,1443493882.682 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T02:31:22.682Z,1443493882.682 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T02:31:22.687Z,1443493882.687 [YawRateCalculator] Loaded
2015-09-29T02:31:22.688Z,1443493882.688 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T02:31:22.688Z,1443493882.688 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T02:31:22.689Z,1443493882.689 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T02:31:22.812Z,1443493882.812 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T02:31:22.812Z,1443493882.812 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T02:31:22.812Z,1443493882.812 [StratificationFrontDetector] Loaded
2015-09-29T02:31:22.813Z,1443493882.813 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T02:31:22.813Z,1443493882.813 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T02:31:22.814Z,1443493882.814 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T02:31:23.114Z,1443493883.114 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T02:31:23.115Z,1443493883.115 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T02:31:23.246Z,1443493883.246 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T02:31:23.246Z,1443493883.246 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T02:31:23.312Z,1443493883.312 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T02:31:23.312Z,1443493883.312 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T02:31:23.330Z,1443493883.330 [NavChart] Loaded
2015-09-29T02:31:23.330Z,1443493883.330 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T02:31:23.335Z,1443493883.335 [UniversalFixResidualReporter] Loaded
2015-09-29T02:31:23.336Z,1443493883.336 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T02:31:23.336Z,1443493883.336 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T02:31:23.337Z,1443493883.337 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T02:31:23.345Z,1443493883.345 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T02:31:23.346Z,1443493883.346 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T02:31:23.650Z,1443493883.650 [CTD_NeilBrown] Loaded
2015-09-29T02:31:23.650Z,1443493883.650 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T02:31:23.659Z,1443493883.659 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T02:31:23.659Z,1443493883.659 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T02:31:23.672Z,1443493883.672 [ISUS] Loaded
2015-09-29T02:31:23.673Z,1443493883.673 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T02:31:23.691Z,1443493883.691 [PAR_Licor] Loaded
2015-09-29T02:31:23.692Z,1443493883.692 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T02:31:23.748Z,1443493883.748 [WetLabsBB2FL] Loaded
2015-09-29T02:31:23.749Z,1443493883.749 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T02:31:23.751Z,1443493883.751 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T02:31:23.751Z,1443493883.751 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T02:31:23.752Z,1443493883.752 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T02:31:23.752Z,1443493883.752 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T02:31:24.481Z,1443493884.481 [AHRS_sp3003D] Loaded
2015-09-29T02:31:24.482Z,1443493884.482 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T02:31:24.670Z,1443493884.670 [DataOverHttps] Loaded
2015-09-29T02:31:24.671Z,1443493884.671 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T02:31:24.685Z,1443493884.685 [Depth_Keller] Loaded
2015-09-29T02:31:24.685Z,1443493884.685 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T02:31:24.690Z,1443493884.690 [DropWeight] Loaded
2015-09-29T02:31:24.690Z,1443493884.690 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T02:31:24.849Z,1443493884.849 [DVL_micro] Loaded
2015-09-29T02:31:24.849Z,1443493884.849 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T02:31:24.959Z,1443493884.959 [NAL9602] Loaded
2015-09-29T02:31:24.960Z,1443493884.960 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T02:31:25.007Z,1443493885.007 [Onboard] Loaded
2015-09-29T02:31:25.008Z,1443493885.008 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T02:31:25.020Z,1443493885.020 [Radio_Surface] Loaded
2015-09-29T02:31:25.020Z,1443493885.020 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T02:31:25.023Z,1443493885.023 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T02:31:25.023Z,1443493885.023 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T02:31:25.186Z,1443493885.186 [DAT] Loaded
2015-09-29T02:31:25.186Z,1443493885.186 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T02:31:25.197Z,1443493885.197 [SCPI] Loaded
2015-09-29T02:31:25.198Z,1443493885.198 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T02:31:25.198Z,1443493885.198 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T02:31:25.199Z,1443493885.199 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T02:31:25.330Z,1443493885.330 [BuoyancyServo] Loaded
2015-09-29T02:31:25.335Z,1443493885.335 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T02:31:25.348Z,1443493885.348 [ElevatorServo] Loaded
2015-09-29T02:31:25.348Z,1443493885.348 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T02:31:25.360Z,1443493885.360 [MassServo] Loaded
2015-09-29T02:31:25.360Z,1443493885.360 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T02:31:25.372Z,1443493885.372 [RudderServo] Loaded
2015-09-29T02:31:25.372Z,1443493885.372 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T02:31:25.388Z,1443493885.388 [ThrusterServo] Loaded
2015-09-29T02:31:25.388Z,1443493885.388 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T02:31:25.389Z,1443493885.389 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T02:31:25.389Z,1443493885.389 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T02:31:25.595Z,1443493885.595 [InternalSim] Loaded
2015-09-29T02:31:25.595Z,1443493885.595 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T02:31:25.596Z,1443493885.596 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T02:31:25.597Z,1443493885.597 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T02:31:25.636Z,1443493885.636 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T02:31:25.644Z,1443493885.644 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T02:31:25.645Z,1443493885.645 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T02:31:25.652Z,1443493885.652 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T02:31:25.655Z,1443493885.655 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T02:31:25.655Z,1443493885.655 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T02:31:25.660Z,1443493885.660 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T02:31:25.660Z,1443493885.660 [Supervisor](DEBUG): Running supervisor.
2015-09-29T02:31:25.661Z,1443493885.661 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T02:31:25.667Z,1443493885.667 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T02:31:25.668Z,1443493885.668 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T02:31:25.669Z,1443493885.669 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T02:31:25.670Z,1443493885.670 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T02:31:25.671Z,1443493885.671 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T02:31:25.672Z,1443493885.672 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T02:31:25.672Z,1443493885.672 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T02:31:25.673Z,1443493885.673 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T02:31:25.674Z,1443493885.674 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T02:31:25.674Z,1443493885.674 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T02:31:25.675Z,1443493885.675 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T02:31:25.676Z,1443493885.676 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T02:31:25.677Z,1443493885.677 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T02:31:25.677Z,1443493885.677 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T02:31:25.677Z,1443493885.677 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T02:31:25.677Z,1443493885.677 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T02:31:25.678Z,1443493885.678 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T02:31:25.678Z,1443493885.678 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T02:31:25.678Z,1443493885.678 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T02:31:25.679Z,1443493885.679 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T02:31:25.680Z,1443493885.680 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T02:31:25.680Z,1443493885.680 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T02:31:25.681Z,1443493885.681 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T02:31:25.681Z,1443493885.681 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T02:31:25.682Z,1443493885.682 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T02:31:25.682Z,1443493885.682 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T02:31:25.682Z,1443493885.682 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T02:31:25.683Z,1443493885.683 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T02:31:25.683Z,1443493885.683 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T02:31:25.688Z,1443493885.688 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T02:31:25.723Z,1443493885.723 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T02:31:25.838Z,1443493885.838 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T02:31:25.844Z,1443493885.844 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T02:31:25.854Z,1443493885.854 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T02:31:25.888Z,1443493885.888 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T02:31:25.895Z,1443493885.895 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T02:31:25.945Z,1443493885.945 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T02:31:25.977Z,1443493885.977 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T02:31:25.977Z,1443493885.977 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T02:31:25.977Z,1443493885.977 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T02:31:25.978Z,1443493885.978 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T02:31:25.978Z,1443493885.978 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T02:31:25.978Z,1443493885.978 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T02:31:25.978Z,1443493885.978 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T02:31:25.979Z,1443493885.979 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T02:31:25.996Z,1443493885.996 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T02:31:26.012Z,1443493886.012 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T02:31:26.026Z,1443493886.026 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T02:31:26.095Z,1443493886.095 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T02:31:26.097Z,1443493886.097 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T02:31:26.138Z,1443493886.138 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T02:31:26.141Z,1443493886.141 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T02:31:26.180Z,1443493886.180 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T02:31:26.183Z,1443493886.183 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T02:31:26.189Z,1443493886.189 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T02:31:26.473Z,1443493886.473 [DVL_micro](INFO): Initializing
2015-09-29T02:31:26.623Z,1443493886.623 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:31:26.635Z,1443493886.635 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:31:26.760Z,1443493886.760 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T02:31:26.774Z,1443493886.774 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T02:31:26.797Z,1443493886.797 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T02:31:26.824Z,1443493886.824 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T02:31:26.844Z,1443493886.844 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T02:31:27.099Z,1443493887.099 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:31:27.104Z,1443493887.104 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:31:36.199Z,1443493896.199 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:36.554Z,1443493896.554 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:36.686Z,1443493896.686 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:37.088Z,1443493897.088 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003600
2015-09-29T02:31:37.093Z,1443493897.093 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:37.484Z,1443493897.484 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:37.884Z,1443493897.884 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:38.285Z,1443493898.285 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:38.684Z,1443493898.684 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:39.085Z,1443493899.085 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:39.484Z,1443493899.484 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:39.883Z,1443493899.883 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:40.289Z,1443493900.289 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:40.689Z,1443493900.689 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:41.089Z,1443493901.089 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:41.483Z,1443493901.483 [NAL9602](INFO): No messages in MT queue
2015-09-29T02:31:41.484Z,1443493901.484 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:41.889Z,1443493901.889 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:42.289Z,1443493902.289 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:42.684Z,1443493902.684 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:43.089Z,1443493903.089 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:43.489Z,1443493903.489 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:43.884Z,1443493903.884 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:44.293Z,1443493904.293 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:44.689Z,1443493904.689 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:45.094Z,1443493905.094 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:45.490Z,1443493905.490 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:45.889Z,1443493905.889 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:46.289Z,1443493906.289 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:46.302Z,1443493906.302 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T02:31:46.690Z,1443493906.690 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:47.090Z,1443493907.090 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:47.489Z,1443493907.489 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:47.890Z,1443493907.890 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:48.289Z,1443493908.289 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:48.689Z,1443493908.689 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:49.089Z,1443493909.089 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:49.489Z,1443493909.489 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:49.890Z,1443493909.890 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:50.289Z,1443493910.289 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:31:50.689Z,1443493910.689 [D