2015-09-29T02:15:31.034Z,1443492931.034 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T02:15:31.037Z,1443492931.037 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T02:15:31.037Z,1443492931.037 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T02:15:31.038Z,1443492931.038 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T02:15:31.042Z,1443492931.042 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T02:15:31.043Z,1443492931.043 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T02:15:31.046Z,1443492931.046 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T02:15:31.058Z,1443492931.058 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T02:15:31.062Z,1443492931.062 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T02:15:31.063Z,1443492931.063 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T02:15:31.064Z,1443492931.064 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T02:15:31.066Z,1443492931.066 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T02:15:31.067Z,1443492931.067 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T02:15:31.069Z,1443492931.069 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T02:15:31.069Z,1443492931.069 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T02:15:31.073Z,1443492931.073 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T02:15:31.468Z,1443492931.468 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T02:15:31.470Z,1443492931.470 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T02:15:31.663Z,1443492931.663 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T02:15:31.665Z,1443492931.665 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T02:15:31.810Z,1443492931.810 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T02:15:31.811Z,1443492931.811 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T02:15:31.959Z,1443492931.959 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T02:15:31.960Z,1443492931.960 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T02:15:32.054Z,1443492932.054 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T02:15:32.275Z,1443492932.275 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T02:15:32.276Z,1443492932.276 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T02:15:32.371Z,1443492932.371 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T02:15:32.372Z,1443492932.372 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T02:15:32.688Z,1443492932.688 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T02:15:32.688Z,1443492932.688 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T02:15:33.088Z,1443492933.088 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T02:15:33.088Z,1443492933.088 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T02:15:33.440Z,1443492933.440 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T02:15:33.441Z,1443492933.441 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T02:15:34.040Z,1443492934.040 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T02:15:34.041Z,1443492934.041 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T02:15:34.272Z,1443492934.272 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T02:15:34.272Z,1443492934.272 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T02:15:34.391Z,1443492934.391 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T02:15:34.392Z,1443492934.392 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T02:15:34.924Z,1443492934.924 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T02:15:34.925Z,1443492934.925 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T02:15:35.051Z,1443492935.051 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T02:15:35.053Z,1443492935.053 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T02:15:35.053Z,1443492935.053 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T02:15:35.058Z,1443492935.058 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T02:15:35.133Z,1443492935.133 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T02:15:35.269Z,1443492935.269 [VerticalControl] Loaded
2015-09-29T02:15:35.270Z,1443492935.270 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T02:15:35.270Z,1443492935.270 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T02:15:35.352Z,1443492935.352 [HorizontalControl] Loaded
2015-09-29T02:15:35.352Z,1443492935.352 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T02:15:35.353Z,1443492935.353 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T02:15:35.363Z,1443492935.363 [SpeedControl] Loaded
2015-09-29T02:15:35.363Z,1443492935.363 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T02:15:35.364Z,1443492935.364 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T02:15:35.365Z,1443492935.365 [LoopControl] Loaded
2015-09-29T02:15:35.365Z,1443492935.365 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T02:15:35.365Z,1443492935.365 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T02:15:35.366Z,1443492935.366 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T02:15:35.529Z,1443492935.529 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T02:15:35.541Z,1443492935.541 [SBIT] Loaded
2015-09-29T02:15:35.541Z,1443492935.541 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T02:15:35.542Z,1443492935.542 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T02:15:35.576Z,1443492935.576 [IBIT] Loaded
2015-09-29T02:15:35.577Z,1443492935.577 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T02:15:35.579Z,1443492935.579 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T02:15:35.736Z,1443492935.736 [CBIT] Loaded
2015-09-29T02:15:35.736Z,1443492935.736 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T02:15:35.737Z,1443492935.737 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T02:15:35.737Z,1443492935.737 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T02:15:35.779Z,1443492935.779 [DepthRateCalculator] Loaded
2015-09-29T02:15:35.779Z,1443492935.779 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T02:15:35.785Z,1443492935.785 [PitchRateCalculator] Loaded
2015-09-29T02:15:35.785Z,1443492935.785 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T02:15:35.801Z,1443492935.801 [SpeedCalculator] Loaded
2015-09-29T02:15:35.801Z,1443492935.801 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T02:15:35.818Z,1443492935.818 [TempGradientCalculator] Loaded
2015-09-29T02:15:35.819Z,1443492935.819 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T02:15:35.840Z,1443492935.840 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T02:15:35.840Z,1443492935.840 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T02:15:35.846Z,1443492935.846 [YawRateCalculator] Loaded
2015-09-29T02:15:35.846Z,1443492935.846 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T02:15:35.847Z,1443492935.847 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T02:15:35.847Z,1443492935.847 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T02:15:35.969Z,1443492935.969 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T02:15:35.969Z,1443492935.969 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T02:15:35.970Z,1443492935.970 [StratificationFrontDetector] Loaded
2015-09-29T02:15:35.970Z,1443492935.970 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T02:15:35.970Z,1443492935.970 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T02:15:35.971Z,1443492935.971 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T02:15:36.271Z,1443492936.271 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T02:15:36.272Z,1443492936.272 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T02:15:36.407Z,1443492936.407 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T02:15:36.407Z,1443492936.407 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T02:15:36.469Z,1443492936.469 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T02:15:36.469Z,1443492936.469 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T02:15:36.491Z,1443492936.491 [NavChart] Loaded
2015-09-29T02:15:36.491Z,1443492936.491 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T02:15:36.497Z,1443492936.497 [UniversalFixResidualReporter] Loaded
2015-09-29T02:15:36.497Z,1443492936.497 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T02:15:36.497Z,1443492936.497 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T02:15:36.498Z,1443492936.498 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T02:15:36.507Z,1443492936.507 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T02:15:36.507Z,1443492936.507 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T02:15:36.809Z,1443492936.809 [CTD_NeilBrown] Loaded
2015-09-29T02:15:36.810Z,1443492936.810 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T02:15:36.818Z,1443492936.818 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T02:15:36.819Z,1443492936.819 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T02:15:36.832Z,1443492936.832 [ISUS] Loaded
2015-09-29T02:15:36.832Z,1443492936.832 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T02:15:36.851Z,1443492936.851 [PAR_Licor] Loaded
2015-09-29T02:15:36.851Z,1443492936.851 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T02:15:36.908Z,1443492936.908 [WetLabsBB2FL] Loaded
2015-09-29T02:15:36.908Z,1443492936.908 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T02:15:36.910Z,1443492936.910 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T02:15:36.911Z,1443492936.911 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T02:15:36.911Z,1443492936.911 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T02:15:36.912Z,1443492936.912 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T02:15:37.648Z,1443492937.648 [AHRS_sp3003D] Loaded
2015-09-29T02:15:37.649Z,1443492937.649 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T02:15:37.838Z,1443492937.838 [DataOverHttps] Loaded
2015-09-29T02:15:37.838Z,1443492937.838 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T02:15:37.852Z,1443492937.852 [Depth_Keller] Loaded
2015-09-29T02:15:37.852Z,1443492937.852 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T02:15:37.857Z,1443492937.857 [DropWeight] Loaded
2015-09-29T02:15:37.857Z,1443492937.857 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T02:15:38.016Z,1443492938.016 [DVL_micro] Loaded
2015-09-29T02:15:38.016Z,1443492938.016 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T02:15:38.126Z,1443492938.126 [NAL9602] Loaded
2015-09-29T02:15:38.126Z,1443492938.126 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T02:15:38.175Z,1443492938.175 [Onboard] Loaded
2015-09-29T02:15:38.175Z,1443492938.175 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T02:15:38.187Z,1443492938.187 [Radio_Surface] Loaded
2015-09-29T02:15:38.187Z,1443492938.187 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T02:15:38.190Z,1443492938.190 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T02:15:38.191Z,1443492938.191 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T02:15:38.353Z,1443492938.353 [DAT] Loaded
2015-09-29T02:15:38.353Z,1443492938.353 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T02:15:38.360Z,1443492938.360 [SCPI] Loaded
2015-09-29T02:15:38.360Z,1443492938.360 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T02:15:38.361Z,1443492938.361 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T02:15:38.362Z,1443492938.362 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T02:15:38.496Z,1443492938.496 [BuoyancyServo] Loaded
2015-09-29T02:15:38.497Z,1443492938.497 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T02:15:38.510Z,1443492938.510 [ElevatorServo] Loaded
2015-09-29T02:15:38.510Z,1443492938.510 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T02:15:38.526Z,1443492938.526 [MassServo] Loaded
2015-09-29T02:15:38.526Z,1443492938.526 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T02:15:38.538Z,1443492938.538 [RudderServo] Loaded
2015-09-29T02:15:38.538Z,1443492938.538 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T02:15:38.550Z,1443492938.550 [ThrusterServo] Loaded
2015-09-29T02:15:38.550Z,1443492938.550 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T02:15:38.551Z,1443492938.551 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T02:15:38.551Z,1443492938.551 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T02:15:38.753Z,1443492938.753 [InternalSim] Loaded
2015-09-29T02:15:38.754Z,1443492938.754 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T02:15:38.758Z,1443492938.758 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T02:15:38.759Z,1443492938.759 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T02:15:38.802Z,1443492938.802 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T02:15:38.807Z,1443492938.807 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T02:15:38.808Z,1443492938.808 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T02:15:38.814Z,1443492938.814 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T02:15:38.819Z,1443492938.819 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T02:15:38.819Z,1443492938.819 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T02:15:38.824Z,1443492938.824 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T02:15:38.824Z,1443492938.824 [Supervisor](DEBUG): Running supervisor.
2015-09-29T02:15:38.824Z,1443492938.824 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T02:15:38.831Z,1443492938.831 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T02:15:38.831Z,1443492938.831 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T02:15:38.832Z,1443492938.832 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T02:15:38.834Z,1443492938.834 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T02:15:38.835Z,1443492938.835 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T02:15:38.836Z,1443492938.836 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T02:15:38.836Z,1443492938.836 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T02:15:38.836Z,1443492938.836 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T02:15:38.838Z,1443492938.838 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T02:15:38.838Z,1443492938.838 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T02:15:38.839Z,1443492938.839 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T02:15:38.840Z,1443492938.840 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T02:15:38.840Z,1443492938.840 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T02:15:38.841Z,1443492938.841 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T02:15:38.841Z,1443492938.841 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T02:15:38.841Z,1443492938.841 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T02:15:38.841Z,1443492938.841 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T02:15:38.842Z,1443492938.842 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T02:15:38.842Z,1443492938.842 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T02:15:38.843Z,1443492938.843 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T02:15:38.843Z,1443492938.843 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T02:15:38.844Z,1443492938.844 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T02:15:38.845Z,1443492938.845 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T02:15:38.845Z,1443492938.845 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T02:15:38.845Z,1443492938.845 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T02:15:38.846Z,1443492938.846 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T02:15:38.846Z,1443492938.846 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T02:15:38.847Z,1443492938.847 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T02:15:38.847Z,1443492938.847 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T02:15:38.852Z,1443492938.852 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T02:15:38.887Z,1443492938.887 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T02:15:38.987Z,1443492938.987 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T02:15:38.988Z,1443492938.988 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T02:15:39.055Z,1443492939.055 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T02:15:39.071Z,1443492939.071 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T02:15:39.079Z,1443492939.079 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T02:15:39.081Z,1443492939.081 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T02:15:39.081Z,1443492939.081 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T02:15:39.081Z,1443492939.081 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T02:15:39.082Z,1443492939.082 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T02:15:39.082Z,1443492939.082 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T02:15:39.082Z,1443492939.082 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T02:15:39.082Z,1443492939.082 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T02:15:39.083Z,1443492939.083 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T02:15:39.096Z,1443492939.096 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T02:15:39.171Z,1443492939.171 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T02:15:39.203Z,1443492939.203 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T02:15:39.210Z,1443492939.210 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T02:15:39.275Z,1443492939.275 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T02:15:39.276Z,1443492939.276 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T02:15:39.327Z,1443492939.327 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T02:15:39.330Z,1443492939.330 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T02:15:39.349Z,1443492939.349 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T02:15:39.353Z,1443492939.353 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T02:15:39.369Z,1443492939.369 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T02:15:39.641Z,1443492939.641 [DVL_micro](INFO): Initializing
2015-09-29T02:15:39.791Z,1443492939.791 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:15:39.803Z,1443492939.803 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:15:39.923Z,1443492939.923 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T02:15:39.930Z,1443492939.930 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T02:15:39.951Z,1443492939.951 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T02:15:39.971Z,1443492939.971 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T02:15:39.979Z,1443492939.979 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T02:15:40.236Z,1443492940.236 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:15:40.237Z,1443492940.237 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:15:49.230Z,1443492949.230 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:49.574Z,1443492949.574 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:49.705Z,1443492949.705 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:50.106Z,1443492950.106 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T02:15:50.109Z,1443492950.109 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:50.504Z,1443492950.504 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:50.904Z,1443492950.904 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:51.304Z,1443492951.304 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:51.705Z,1443492951.705 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:52.103Z,1443492952.103 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:52.503Z,1443492952.503 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:52.902Z,1443492952.902 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:53.304Z,1443492953.304 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:53.704Z,1443492953.704 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:54.103Z,1443492954.103 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:54.502Z,1443492954.502 [NAL9602](INFO): No messages in MT queue
2015-09-29T02:15:54.503Z,1443492954.503 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:54.903Z,1443492954.903 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:55.304Z,1443492955.304 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:55.704Z,1443492955.704 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:56.104Z,1443492956.104 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:56.503Z,1443492956.503 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:56.903Z,1443492956.903 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:57.304Z,1443492957.304 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:57.703Z,1443492957.703 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:58.103Z,1443492958.103 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:58.503Z,1443492958.503 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:58.903Z,1443492958.903 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:59.303Z,1443492959.303 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:15:59.316Z,1443492959.316 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T02:15:59.703Z,1443492959.703 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:16:00.111Z,1443492960.111 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:16:00.504Z,1443492960.504 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:16:00.904Z,1443492960.904 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:16:01.303Z,1443492961.303 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:16:01.704Z,1443492961.704 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:16:02.104Z,1443492962.104 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:16:02.504Z,1443492962.504 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:16:02.903Z,1443492962.903 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:16:03.304Z,1443492963.304 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:16:03.704Z,1443492963.704 [D