2015-09-29T02:07:36.815Z,1443492456.815 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T02:07:36.819Z,1443492456.819 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T02:07:36.819Z,1443492456.819 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T02:07:36.820Z,1443492456.820 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T02:07:36.824Z,1443492456.824 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T02:07:36.825Z,1443492456.825 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T02:07:36.827Z,1443492456.827 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T02:07:36.840Z,1443492456.840 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T02:07:36.844Z,1443492456.844 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T02:07:36.845Z,1443492456.845 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T02:07:36.846Z,1443492456.846 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T02:07:36.848Z,1443492456.848 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T02:07:36.849Z,1443492456.849 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T02:07:36.851Z,1443492456.851 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T02:07:36.851Z,1443492456.851 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T02:07:36.855Z,1443492456.855 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T02:07:37.268Z,1443492457.268 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T02:07:37.270Z,1443492457.270 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T02:07:37.465Z,1443492457.465 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T02:07:37.467Z,1443492457.467 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T02:07:37.613Z,1443492457.613 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T02:07:37.614Z,1443492457.614 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T02:07:37.765Z,1443492457.765 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T02:07:37.766Z,1443492457.766 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T02:07:37.862Z,1443492457.862 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T02:07:38.085Z,1443492458.085 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T02:07:38.086Z,1443492458.086 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T02:07:38.185Z,1443492458.185 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T02:07:38.186Z,1443492458.186 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T02:07:38.509Z,1443492458.509 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T02:07:38.510Z,1443492458.510 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T02:07:38.933Z,1443492458.933 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T02:07:38.934Z,1443492458.934 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T02:07:39.301Z,1443492459.301 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T02:07:39.303Z,1443492459.303 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T02:07:39.918Z,1443492459.918 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T02:07:39.919Z,1443492459.919 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T02:07:40.161Z,1443492460.161 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T02:07:40.162Z,1443492460.162 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T02:07:40.287Z,1443492460.287 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T02:07:40.288Z,1443492460.288 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T02:07:40.832Z,1443492460.832 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T02:07:40.833Z,1443492460.833 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T02:07:40.961Z,1443492460.961 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T02:07:40.963Z,1443492460.963 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T02:07:40.963Z,1443492460.963 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T02:07:40.968Z,1443492460.968 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T02:07:41.044Z,1443492461.044 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T02:07:41.180Z,1443492461.180 [VerticalControl] Loaded
2015-09-29T02:07:41.181Z,1443492461.181 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T02:07:41.182Z,1443492461.182 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T02:07:41.264Z,1443492461.264 [HorizontalControl] Loaded
2015-09-29T02:07:41.268Z,1443492461.268 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T02:07:41.269Z,1443492461.269 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T02:07:41.275Z,1443492461.275 [SpeedControl] Loaded
2015-09-29T02:07:41.275Z,1443492461.275 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T02:07:41.276Z,1443492461.276 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T02:07:41.277Z,1443492461.277 [LoopControl] Loaded
2015-09-29T02:07:41.277Z,1443492461.277 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T02:07:41.277Z,1443492461.277 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T02:07:41.278Z,1443492461.278 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T02:07:41.443Z,1443492461.443 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T02:07:41.456Z,1443492461.456 [SBIT] Loaded
2015-09-29T02:07:41.456Z,1443492461.456 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T02:07:41.461Z,1443492461.461 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T02:07:41.491Z,1443492461.491 [IBIT] Loaded
2015-09-29T02:07:41.491Z,1443492461.491 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T02:07:41.493Z,1443492461.493 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T02:07:41.651Z,1443492461.651 [CBIT] Loaded
2015-09-29T02:07:41.651Z,1443492461.651 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T02:07:41.652Z,1443492461.652 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T02:07:41.652Z,1443492461.652 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T02:07:41.694Z,1443492461.694 [DepthRateCalculator] Loaded
2015-09-29T02:07:41.695Z,1443492461.695 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T02:07:41.700Z,1443492461.700 [PitchRateCalculator] Loaded
2015-09-29T02:07:41.700Z,1443492461.700 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T02:07:41.716Z,1443492461.716 [SpeedCalculator] Loaded
2015-09-29T02:07:41.717Z,1443492461.717 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T02:07:41.734Z,1443492461.734 [TempGradientCalculator] Loaded
2015-09-29T02:07:41.734Z,1443492461.734 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T02:07:41.756Z,1443492461.756 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T02:07:41.756Z,1443492461.756 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T02:07:41.762Z,1443492461.762 [YawRateCalculator] Loaded
2015-09-29T02:07:41.762Z,1443492461.762 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T02:07:41.763Z,1443492461.763 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T02:07:41.763Z,1443492461.763 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T02:07:41.889Z,1443492461.889 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T02:07:41.889Z,1443492461.889 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T02:07:41.889Z,1443492461.889 [StratificationFrontDetector] Loaded
2015-09-29T02:07:41.890Z,1443492461.890 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T02:07:41.890Z,1443492461.890 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T02:07:41.891Z,1443492461.891 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T02:07:42.195Z,1443492462.195 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T02:07:42.196Z,1443492462.196 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T02:07:42.334Z,1443492462.334 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T02:07:42.334Z,1443492462.334 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T02:07:42.396Z,1443492462.396 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T02:07:42.396Z,1443492462.396 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T02:07:42.418Z,1443492462.418 [NavChart] Loaded
2015-09-29T02:07:42.419Z,1443492462.419 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T02:07:42.424Z,1443492462.424 [UniversalFixResidualReporter] Loaded
2015-09-29T02:07:42.424Z,1443492462.424 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T02:07:42.425Z,1443492462.425 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T02:07:42.425Z,1443492462.425 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T02:07:42.434Z,1443492462.434 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T02:07:42.435Z,1443492462.435 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T02:07:42.744Z,1443492462.744 [CTD_NeilBrown] Loaded
2015-09-29T02:07:42.744Z,1443492462.744 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T02:07:42.752Z,1443492462.752 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T02:07:42.753Z,1443492462.753 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T02:07:42.766Z,1443492462.766 [ISUS] Loaded
2015-09-29T02:07:42.766Z,1443492462.766 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T02:07:42.785Z,1443492462.785 [PAR_Licor] Loaded
2015-09-29T02:07:42.785Z,1443492462.785 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T02:07:42.842Z,1443492462.842 [WetLabsBB2FL] Loaded
2015-09-29T02:07:42.842Z,1443492462.842 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T02:07:42.844Z,1443492462.844 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T02:07:42.845Z,1443492462.845 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T02:07:42.845Z,1443492462.845 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T02:07:42.846Z,1443492462.846 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T02:07:43.583Z,1443492463.583 [AHRS_sp3003D] Loaded
2015-09-29T02:07:43.583Z,1443492463.583 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T02:07:43.777Z,1443492463.777 [DataOverHttps] Loaded
2015-09-29T02:07:43.778Z,1443492463.778 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T02:07:43.791Z,1443492463.791 [Depth_Keller] Loaded
2015-09-29T02:07:43.792Z,1443492463.792 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T02:07:43.801Z,1443492463.801 [DropWeight] Loaded
2015-09-29T02:07:43.801Z,1443492463.801 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T02:07:43.957Z,1443492463.957 [DVL_micro] Loaded
2015-09-29T02:07:43.957Z,1443492463.957 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T02:07:44.068Z,1443492464.068 [NAL9602] Loaded
2015-09-29T02:07:44.068Z,1443492464.068 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T02:07:44.116Z,1443492464.116 [Onboard] Loaded
2015-09-29T02:07:44.116Z,1443492464.116 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T02:07:44.133Z,1443492464.133 [Radio_Surface] Loaded
2015-09-29T02:07:44.133Z,1443492464.133 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T02:07:44.136Z,1443492464.136 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T02:07:44.137Z,1443492464.137 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T02:07:44.300Z,1443492464.300 [DAT] Loaded
2015-09-29T02:07:44.300Z,1443492464.300 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T02:07:44.307Z,1443492464.307 [SCPI] Loaded
2015-09-29T02:07:44.307Z,1443492464.307 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T02:07:44.308Z,1443492464.308 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T02:07:44.309Z,1443492464.309 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T02:07:44.451Z,1443492464.451 [BuoyancyServo] Loaded
2015-09-29T02:07:44.452Z,1443492464.452 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T02:07:44.465Z,1443492464.465 [ElevatorServo] Loaded
2015-09-29T02:07:44.465Z,1443492464.465 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T02:07:44.477Z,1443492464.477 [MassServo] Loaded
2015-09-29T02:07:44.477Z,1443492464.477 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T02:07:44.493Z,1443492464.493 [RudderServo] Loaded
2015-09-29T02:07:44.494Z,1443492464.494 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T02:07:44.505Z,1443492464.505 [ThrusterServo] Loaded
2015-09-29T02:07:44.505Z,1443492464.505 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T02:07:44.506Z,1443492464.506 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T02:07:44.507Z,1443492464.507 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T02:07:44.715Z,1443492464.715 [InternalSim] Loaded
2015-09-29T02:07:44.715Z,1443492464.715 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T02:07:44.716Z,1443492464.716 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T02:07:44.716Z,1443492464.716 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T02:07:44.760Z,1443492464.760 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T02:07:44.764Z,1443492464.764 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T02:07:44.765Z,1443492464.765 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T02:07:44.772Z,1443492464.772 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T02:07:44.777Z,1443492464.777 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T02:07:44.777Z,1443492464.777 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T02:07:44.782Z,1443492464.782 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T02:07:44.782Z,1443492464.782 [Supervisor](DEBUG): Running supervisor.
2015-09-29T02:07:44.782Z,1443492464.782 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T02:07:44.789Z,1443492464.789 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T02:07:44.789Z,1443492464.789 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T02:07:44.790Z,1443492464.790 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T02:07:44.792Z,1443492464.792 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T02:07:44.793Z,1443492464.793 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T02:07:44.793Z,1443492464.793 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T02:07:44.794Z,1443492464.794 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T02:07:44.794Z,1443492464.794 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T02:07:44.796Z,1443492464.796 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T02:07:44.796Z,1443492464.796 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T02:07:44.797Z,1443492464.797 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T02:07:44.797Z,1443492464.797 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T02:07:44.798Z,1443492464.798 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T02:07:44.799Z,1443492464.799 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T02:07:44.799Z,1443492464.799 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T02:07:44.799Z,1443492464.799 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T02:07:44.799Z,1443492464.799 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T02:07:44.800Z,1443492464.800 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T02:07:44.800Z,1443492464.800 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T02:07:44.801Z,1443492464.801 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T02:07:44.801Z,1443492464.801 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T02:07:44.802Z,1443492464.802 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T02:07:44.802Z,1443492464.802 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T02:07:44.803Z,1443492464.803 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T02:07:44.803Z,1443492464.803 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T02:07:44.804Z,1443492464.804 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T02:07:44.804Z,1443492464.804 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T02:07:44.804Z,1443492464.804 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T02:07:44.805Z,1443492464.805 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T02:07:44.810Z,1443492464.810 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T02:07:44.845Z,1443492464.845 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T02:07:44.953Z,1443492464.953 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T02:07:45.013Z,1443492465.013 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T02:07:45.024Z,1443492465.024 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T02:07:45.052Z,1443492465.052 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T02:07:45.060Z,1443492465.060 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T02:07:45.068Z,1443492465.068 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T02:07:45.070Z,1443492465.070 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T02:07:45.070Z,1443492465.070 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T02:07:45.070Z,1443492465.070 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T02:07:45.070Z,1443492465.070 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T02:07:45.071Z,1443492465.071 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T02:07:45.071Z,1443492465.071 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T02:07:45.071Z,1443492465.071 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T02:07:45.071Z,1443492465.071 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T02:07:45.102Z,1443492465.102 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T02:07:45.112Z,1443492465.112 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T02:07:45.122Z,1443492465.122 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T02:07:45.196Z,1443492465.196 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T02:07:45.197Z,1443492465.197 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T02:07:45.219Z,1443492465.219 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T02:07:45.246Z,1443492465.246 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T02:07:45.264Z,1443492465.264 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T02:07:45.268Z,1443492465.268 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T02:07:45.274Z,1443492465.274 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T02:07:45.596Z,1443492465.596 [DVL_micro](INFO): Initializing
2015-09-29T02:07:45.789Z,1443492465.789 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:07:45.804Z,1443492465.804 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:07:45.937Z,1443492465.937 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T02:07:45.943Z,1443492465.943 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T02:07:45.961Z,1443492465.961 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T02:07:45.966Z,1443492465.966 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T02:07:45.977Z,1443492465.977 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T02:07:46.226Z,1443492466.226 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:07:46.227Z,1443492466.227 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:07:55.333Z,1443492475.333 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:07:55.635Z,1443492475.635 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:07:55.795Z,1443492475.795 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:07:56.208Z,1443492476.208 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T02:07:56.212Z,1443492476.212 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:07:56.594Z,1443492476.594 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:07:57.013Z,1443492477.013 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:07:57.393Z,1443492477.393 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:07:57.793Z,1443492477.793 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:07:58.193Z,1443492478.193 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:07:58.592Z,1443492478.592 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:07:58.992Z,1443492478.992 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:07:59.394Z,1443492479.394 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:07:59.802Z,1443492479.802 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:00.194Z,1443492480.194 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:00.592Z,1443492480.592 [NAL9602](INFO): No messages in MT queue
2015-09-29T02:08:00.593Z,1443492480.593 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:00.993Z,1443492480.993 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:01.393Z,1443492481.393 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:01.793Z,1443492481.793 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:02.193Z,1443492482.193 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:02.593Z,1443492482.593 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:02.993Z,1443492482.993 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:03.394Z,1443492483.394 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:03.793Z,1443492483.793 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:04.194Z,1443492484.194 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:04.594Z,1443492484.594 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:04.994Z,1443492484.994 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:05.395Z,1443492485.395 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:05.438Z,1443492485.438 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T02:08:05.793Z,1443492485.793 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:06.194Z,1443492486.194 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:06.593Z,1443492486.593 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:06.993Z,1443492486.993 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:07.393Z,1443492487.393 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:07.793Z,1443492487.793 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:08.195Z,1443492488.195 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:08.593Z,1443492488.593 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:08.993Z,1443492488.993 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:09.393Z,1443492489.393 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:08:09.793Z,1443492489.793 [D