2015-09-29T01:59:43.047Z,1443491983.047 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T01:59:43.054Z,1443491983.054 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T01:59:43.054Z,1443491983.054 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T01:59:43.055Z,1443491983.055 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T01:59:43.057Z,1443491983.057 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T01:59:43.058Z,1443491983.058 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T01:59:43.061Z,1443491983.061 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T01:59:43.073Z,1443491983.073 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T01:59:43.077Z,1443491983.077 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T01:59:43.078Z,1443491983.078 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T01:59:43.079Z,1443491983.079 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T01:59:43.081Z,1443491983.081 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T01:59:43.082Z,1443491983.082 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T01:59:43.084Z,1443491983.084 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T01:59:43.084Z,1443491983.084 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T01:59:43.088Z,1443491983.088 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T01:59:43.483Z,1443491983.483 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T01:59:43.485Z,1443491983.485 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T01:59:43.677Z,1443491983.677 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T01:59:43.679Z,1443491983.679 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T01:59:43.822Z,1443491983.822 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T01:59:43.823Z,1443491983.823 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T01:59:43.974Z,1443491983.974 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T01:59:43.975Z,1443491983.975 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T01:59:44.069Z,1443491984.069 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T01:59:44.288Z,1443491984.288 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T01:59:44.289Z,1443491984.289 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T01:59:44.386Z,1443491984.386 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T01:59:44.387Z,1443491984.387 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T01:59:44.702Z,1443491984.702 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T01:59:44.703Z,1443491984.703 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T01:59:45.103Z,1443491985.103 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T01:59:45.103Z,1443491985.103 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T01:59:45.454Z,1443491985.454 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T01:59:45.456Z,1443491985.456 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T01:59:46.055Z,1443491986.055 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T01:59:46.056Z,1443491986.056 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T01:59:46.286Z,1443491986.286 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T01:59:46.287Z,1443491986.287 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T01:59:46.399Z,1443491986.399 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T01:59:46.399Z,1443491986.399 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T01:59:46.913Z,1443491986.913 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T01:59:46.913Z,1443491986.913 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T01:59:47.092Z,1443491987.092 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T01:59:47.094Z,1443491987.094 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T01:59:47.094Z,1443491987.094 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T01:59:47.104Z,1443491987.104 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T01:59:47.179Z,1443491987.179 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T01:59:47.315Z,1443491987.315 [VerticalControl] Loaded
2015-09-29T01:59:47.315Z,1443491987.315 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T01:59:47.316Z,1443491987.316 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T01:59:47.398Z,1443491987.398 [HorizontalControl] Loaded
2015-09-29T01:59:47.398Z,1443491987.398 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T01:59:47.398Z,1443491987.398 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T01:59:47.404Z,1443491987.404 [SpeedControl] Loaded
2015-09-29T01:59:47.405Z,1443491987.405 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T01:59:47.405Z,1443491987.405 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T01:59:47.406Z,1443491987.406 [LoopControl] Loaded
2015-09-29T01:59:47.406Z,1443491987.406 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T01:59:47.407Z,1443491987.407 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T01:59:47.407Z,1443491987.407 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T01:59:47.569Z,1443491987.569 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T01:59:47.585Z,1443491987.585 [SBIT] Loaded
2015-09-29T01:59:47.585Z,1443491987.585 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T01:59:47.586Z,1443491987.586 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T01:59:47.616Z,1443491987.616 [IBIT] Loaded
2015-09-29T01:59:47.617Z,1443491987.617 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T01:59:47.623Z,1443491987.623 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T01:59:47.780Z,1443491987.780 [CBIT] Loaded
2015-09-29T01:59:47.780Z,1443491987.780 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T01:59:47.781Z,1443491987.781 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T01:59:47.781Z,1443491987.781 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T01:59:47.819Z,1443491987.819 [DepthRateCalculator] Loaded
2015-09-29T01:59:47.819Z,1443491987.819 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T01:59:47.829Z,1443491987.829 [PitchRateCalculator] Loaded
2015-09-29T01:59:47.829Z,1443491987.829 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T01:59:47.841Z,1443491987.841 [SpeedCalculator] Loaded
2015-09-29T01:59:47.841Z,1443491987.841 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T01:59:47.859Z,1443491987.859 [TempGradientCalculator] Loaded
2015-09-29T01:59:47.859Z,1443491987.859 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T01:59:47.880Z,1443491987.880 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T01:59:47.881Z,1443491987.881 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T01:59:47.886Z,1443491987.886 [YawRateCalculator] Loaded
2015-09-29T01:59:47.886Z,1443491987.886 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T01:59:47.887Z,1443491987.887 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T01:59:47.887Z,1443491987.887 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T01:59:48.012Z,1443491988.012 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T01:59:48.012Z,1443491988.012 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T01:59:48.012Z,1443491988.012 [StratificationFrontDetector] Loaded
2015-09-29T01:59:48.013Z,1443491988.013 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T01:59:48.013Z,1443491988.013 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T01:59:48.014Z,1443491988.014 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T01:59:48.315Z,1443491988.315 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T01:59:48.316Z,1443491988.316 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T01:59:48.447Z,1443491988.447 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T01:59:48.447Z,1443491988.447 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T01:59:48.513Z,1443491988.513 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T01:59:48.513Z,1443491988.513 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T01:59:48.531Z,1443491988.531 [NavChart] Loaded
2015-09-29T01:59:48.531Z,1443491988.531 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T01:59:48.536Z,1443491988.536 [UniversalFixResidualReporter] Loaded
2015-09-29T01:59:48.537Z,1443491988.537 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T01:59:48.537Z,1443491988.537 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T01:59:48.540Z,1443491988.540 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T01:59:48.548Z,1443491988.548 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T01:59:48.549Z,1443491988.549 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T01:59:48.836Z,1443491988.836 [CTD_NeilBrown] Loaded
2015-09-29T01:59:48.836Z,1443491988.836 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T01:59:48.838Z,1443491988.838 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T01:59:48.838Z,1443491988.838 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T01:59:48.851Z,1443491988.851 [ISUS] Loaded
2015-09-29T01:59:48.851Z,1443491988.851 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T01:59:48.866Z,1443491988.866 [PAR_Licor] Loaded
2015-09-29T01:59:48.866Z,1443491988.866 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T01:59:48.919Z,1443491988.919 [WetLabsBB2FL] Loaded
2015-09-29T01:59:48.919Z,1443491988.919 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T01:59:48.920Z,1443491988.920 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T01:59:48.920Z,1443491988.920 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T01:59:48.921Z,1443491988.921 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T01:59:48.922Z,1443491988.922 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T01:59:49.574Z,1443491989.574 [AHRS_sp3003D] Loaded
2015-09-29T01:59:49.574Z,1443491989.574 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T01:59:49.743Z,1443491989.743 [DataOverHttps] Loaded
2015-09-29T01:59:49.743Z,1443491989.743 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T01:59:49.757Z,1443491989.757 [Depth_Keller] Loaded
2015-09-29T01:59:49.757Z,1443491989.757 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T01:59:49.762Z,1443491989.762 [DropWeight] Loaded
2015-09-29T01:59:49.762Z,1443491989.762 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T01:59:49.904Z,1443491989.904 [DVL_micro] Loaded
2015-09-29T01:59:49.905Z,1443491989.905 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T01:59:50.002Z,1443491990.002 [NAL9602] Loaded
2015-09-29T01:59:50.002Z,1443491990.002 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T01:59:50.046Z,1443491990.046 [Onboard] Loaded
2015-09-29T01:59:50.047Z,1443491990.047 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T01:59:50.058Z,1443491990.058 [Radio_Surface] Loaded
2015-09-29T01:59:50.059Z,1443491990.059 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T01:59:50.060Z,1443491990.060 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T01:59:50.060Z,1443491990.060 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T01:59:50.207Z,1443491990.207 [DAT] Loaded
2015-09-29T01:59:50.207Z,1443491990.207 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T01:59:50.214Z,1443491990.214 [SCPI] Loaded
2015-09-29T01:59:50.214Z,1443491990.214 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T01:59:50.215Z,1443491990.215 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T01:59:50.215Z,1443491990.215 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T01:59:50.339Z,1443491990.339 [BuoyancyServo] Loaded
2015-09-29T01:59:50.339Z,1443491990.339 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T01:59:50.352Z,1443491990.352 [ElevatorServo] Loaded
2015-09-29T01:59:50.352Z,1443491990.352 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T01:59:50.364Z,1443491990.364 [MassServo] Loaded
2015-09-29T01:59:50.365Z,1443491990.365 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T01:59:50.377Z,1443491990.377 [RudderServo] Loaded
2015-09-29T01:59:50.377Z,1443491990.377 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T01:59:50.388Z,1443491990.388 [ThrusterServo] Loaded
2015-09-29T01:59:50.389Z,1443491990.389 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T01:59:50.389Z,1443491990.389 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T01:59:50.390Z,1443491990.390 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T01:59:50.575Z,1443491990.575 [InternalSim] Loaded
2015-09-29T01:59:50.576Z,1443491990.576 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T01:59:50.576Z,1443491990.576 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T01:59:50.577Z,1443491990.577 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T01:59:50.616Z,1443491990.616 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T01:59:50.620Z,1443491990.620 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T01:59:50.621Z,1443491990.621 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T01:59:50.628Z,1443491990.628 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T01:59:50.629Z,1443491990.629 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T01:59:50.629Z,1443491990.629 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T01:59:50.634Z,1443491990.634 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T01:59:50.634Z,1443491990.634 [Supervisor](DEBUG): Running supervisor.
2015-09-29T01:59:50.635Z,1443491990.635 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T01:59:50.638Z,1443491990.638 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T01:59:50.638Z,1443491990.638 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T01:59:50.639Z,1443491990.639 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T01:59:50.641Z,1443491990.641 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T01:59:50.642Z,1443491990.642 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T01:59:50.642Z,1443491990.642 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T01:59:50.643Z,1443491990.643 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T01:59:50.643Z,1443491990.643 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T01:59:50.645Z,1443491990.645 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T01:59:50.645Z,1443491990.645 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T01:59:50.646Z,1443491990.646 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T01:59:50.646Z,1443491990.646 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T01:59:50.647Z,1443491990.647 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T01:59:50.647Z,1443491990.647 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T01:59:50.648Z,1443491990.648 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T01:59:50.648Z,1443491990.648 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T01:59:50.648Z,1443491990.648 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T01:59:50.649Z,1443491990.649 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T01:59:50.649Z,1443491990.649 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T01:59:50.649Z,1443491990.649 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T01:59:50.650Z,1443491990.650 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T01:59:50.651Z,1443491990.651 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T01:59:50.651Z,1443491990.651 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T01:59:50.652Z,1443491990.652 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T01:59:50.652Z,1443491990.652 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T01:59:50.653Z,1443491990.653 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T01:59:50.653Z,1443491990.653 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T01:59:50.653Z,1443491990.653 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T01:59:50.654Z,1443491990.654 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T01:59:50.658Z,1443491990.658 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T01:59:50.686Z,1443491990.686 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T01:59:50.770Z,1443491990.770 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T01:59:50.778Z,1443491990.778 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T01:59:50.818Z,1443491990.818 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T01:59:50.834Z,1443491990.834 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T01:59:50.845Z,1443491990.845 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T01:59:50.858Z,1443491990.858 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T01:59:50.875Z,1443491990.875 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T01:59:50.878Z,1443491990.878 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T01:59:50.878Z,1443491990.878 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T01:59:50.878Z,1443491990.878 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T01:59:50.879Z,1443491990.879 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T01:59:50.879Z,1443491990.879 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T01:59:50.879Z,1443491990.879 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T01:59:50.879Z,1443491990.879 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T01:59:50.880Z,1443491990.880 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T01:59:50.916Z,1443491990.916 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T01:59:50.917Z,1443491990.917 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T01:59:50.983Z,1443491990.983 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T01:59:50.984Z,1443491990.984 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T01:59:51.031Z,1443491991.031 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T01:59:51.042Z,1443491991.042 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T01:59:51.048Z,1443491991.048 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T01:59:51.067Z,1443491991.067 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T01:59:51.073Z,1443491991.073 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T01:59:51.271Z,1443491991.271 [DVL_micro](INFO): Initializing
2015-09-29T01:59:51.434Z,1443491991.434 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:59:51.446Z,1443491991.446 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:59:51.543Z,1443491991.543 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T01:59:51.550Z,1443491991.550 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T01:59:51.570Z,1443491991.570 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T01:59:51.575Z,1443491991.575 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T01:59:51.590Z,1443491991.590 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T01:59:51.831Z,1443491991.831 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:59:51.832Z,1443491991.832 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T02:00:00.737Z,1443492000.737 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:01.067Z,1443492001.067 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:01.209Z,1443492001.209 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:01.609Z,1443492001.609 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T02:00:01.612Z,1443492001.612 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:02.007Z,1443492002.007 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:02.408Z,1443492002.408 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:02.807Z,1443492002.807 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:03.206Z,1443492003.206 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:03.606Z,1443492003.606 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:04.007Z,1443492004.007 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:04.405Z,1443492004.405 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:04.809Z,1443492004.809 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:05.209Z,1443492005.209 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:05.609Z,1443492005.609 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:06.008Z,1443492006.008 [NAL9602](INFO): No messages in MT queue
2015-09-29T02:00:06.009Z,1443492006.009 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:06.409Z,1443492006.409 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:06.809Z,1443492006.809 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:07.209Z,1443492007.209 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:07.609Z,1443492007.609 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:08.009Z,1443492008.009 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:08.407Z,1443492008.407 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:08.815Z,1443492008.815 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:09.215Z,1443492009.215 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:09.616Z,1443492009.616 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:10.016Z,1443492010.016 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:10.417Z,1443492010.417 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:10.817Z,1443492010.817 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:11.216Z,1443492011.216 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:11.243Z,1443492011.243 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T02:00:11.606Z,1443492011.606 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:12.016Z,1443492012.016 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:12.417Z,1443492012.417 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:12.811Z,1443492012.811 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:13.206Z,1443492013.206 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:13.607Z,1443492013.607 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:14.006Z,1443492014.006 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:14.407Z,1443492014.407 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:14.806Z,1443492014.806 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T02:00:15.207Z,1443492015.207 [D