2015-09-29T01:51:45.930Z,1443491505.930 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T01:51:45.933Z,1443491505.933 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T01:51:45.934Z,1443491505.934 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T01:51:45.934Z,1443491505.934 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T01:51:45.936Z,1443491505.936 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T01:51:45.936Z,1443491505.936 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T01:51:45.939Z,1443491505.939 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T01:51:45.952Z,1443491505.952 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T01:51:45.956Z,1443491505.956 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T01:51:45.956Z,1443491505.956 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T01:51:45.957Z,1443491505.957 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T01:51:45.960Z,1443491505.960 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T01:51:45.960Z,1443491505.960 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T01:51:45.962Z,1443491505.962 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T01:51:45.963Z,1443491505.963 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T01:51:45.967Z,1443491505.967 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T01:51:46.359Z,1443491506.359 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T01:51:46.361Z,1443491506.361 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T01:51:46.551Z,1443491506.551 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T01:51:46.553Z,1443491506.553 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T01:51:46.697Z,1443491506.697 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T01:51:46.697Z,1443491506.697 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T01:51:46.845Z,1443491506.845 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T01:51:46.845Z,1443491506.845 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T01:51:46.940Z,1443491506.940 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T01:51:47.161Z,1443491507.161 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T01:51:47.162Z,1443491507.162 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T01:51:47.256Z,1443491507.256 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T01:51:47.257Z,1443491507.257 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T01:51:47.569Z,1443491507.569 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T01:51:47.570Z,1443491507.570 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T01:51:47.973Z,1443491507.973 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T01:51:47.974Z,1443491507.974 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T01:51:48.327Z,1443491508.327 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T01:51:48.329Z,1443491508.329 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T01:51:48.930Z,1443491508.930 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T01:51:48.930Z,1443491508.930 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T01:51:49.161Z,1443491509.161 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T01:51:49.162Z,1443491509.162 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T01:51:49.281Z,1443491509.281 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T01:51:49.282Z,1443491509.282 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T01:51:49.800Z,1443491509.800 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T01:51:49.801Z,1443491509.801 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T01:51:49.969Z,1443491509.969 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T01:51:49.971Z,1443491509.971 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T01:51:49.971Z,1443491509.971 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T01:51:49.976Z,1443491509.976 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T01:51:50.053Z,1443491510.053 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T01:51:50.191Z,1443491510.191 [VerticalControl] Loaded
2015-09-29T01:51:50.191Z,1443491510.191 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T01:51:50.192Z,1443491510.192 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T01:51:50.275Z,1443491510.275 [HorizontalControl] Loaded
2015-09-29T01:51:50.275Z,1443491510.275 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T01:51:50.280Z,1443491510.280 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T01:51:50.286Z,1443491510.286 [SpeedControl] Loaded
2015-09-29T01:51:50.287Z,1443491510.287 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T01:51:50.287Z,1443491510.287 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T01:51:50.288Z,1443491510.288 [LoopControl] Loaded
2015-09-29T01:51:50.288Z,1443491510.288 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T01:51:50.289Z,1443491510.289 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T01:51:50.290Z,1443491510.290 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T01:51:50.460Z,1443491510.460 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T01:51:50.472Z,1443491510.472 [SBIT] Loaded
2015-09-29T01:51:50.472Z,1443491510.472 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T01:51:50.473Z,1443491510.473 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T01:51:50.508Z,1443491510.508 [IBIT] Loaded
2015-09-29T01:51:50.508Z,1443491510.508 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T01:51:50.510Z,1443491510.510 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T01:51:50.665Z,1443491510.665 [CBIT] Loaded
2015-09-29T01:51:50.665Z,1443491510.665 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T01:51:50.666Z,1443491510.666 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T01:51:50.666Z,1443491510.666 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T01:51:50.708Z,1443491510.708 [DepthRateCalculator] Loaded
2015-09-29T01:51:50.708Z,1443491510.708 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T01:51:50.714Z,1443491510.714 [PitchRateCalculator] Loaded
2015-09-29T01:51:50.714Z,1443491510.714 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T01:51:50.730Z,1443491510.730 [SpeedCalculator] Loaded
2015-09-29T01:51:50.731Z,1443491510.731 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T01:51:50.748Z,1443491510.748 [TempGradientCalculator] Loaded
2015-09-29T01:51:50.749Z,1443491510.749 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T01:51:50.770Z,1443491510.770 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T01:51:50.771Z,1443491510.771 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T01:51:50.776Z,1443491510.776 [YawRateCalculator] Loaded
2015-09-29T01:51:50.777Z,1443491510.777 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T01:51:50.777Z,1443491510.777 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T01:51:50.778Z,1443491510.778 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T01:51:50.903Z,1443491510.903 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T01:51:50.904Z,1443491510.904 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T01:51:50.904Z,1443491510.904 [StratificationFrontDetector] Loaded
2015-09-29T01:51:50.904Z,1443491510.904 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T01:51:50.905Z,1443491510.905 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T01:51:50.906Z,1443491510.906 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T01:51:51.209Z,1443491511.209 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T01:51:51.210Z,1443491511.210 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T01:51:51.346Z,1443491511.346 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T01:51:51.346Z,1443491511.346 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T01:51:51.412Z,1443491511.412 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T01:51:51.413Z,1443491511.413 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T01:51:51.431Z,1443491511.431 [NavChart] Loaded
2015-09-29T01:51:51.431Z,1443491511.431 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T01:51:51.436Z,1443491511.436 [UniversalFixResidualReporter] Loaded
2015-09-29T01:51:51.437Z,1443491511.437 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T01:51:51.437Z,1443491511.437 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T01:51:51.438Z,1443491511.438 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T01:51:51.446Z,1443491511.446 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T01:51:51.447Z,1443491511.447 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T01:51:51.755Z,1443491511.755 [CTD_NeilBrown] Loaded
2015-09-29T01:51:51.755Z,1443491511.755 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T01:51:51.764Z,1443491511.764 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T01:51:51.764Z,1443491511.764 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T01:51:51.777Z,1443491511.777 [ISUS] Loaded
2015-09-29T01:51:51.778Z,1443491511.778 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T01:51:51.797Z,1443491511.797 [PAR_Licor] Loaded
2015-09-29T01:51:51.797Z,1443491511.797 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T01:51:51.855Z,1443491511.855 [WetLabsBB2FL] Loaded
2015-09-29T01:51:51.855Z,1443491511.855 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T01:51:51.860Z,1443491511.860 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T01:51:51.860Z,1443491511.860 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T01:51:51.861Z,1443491511.861 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T01:51:51.862Z,1443491511.862 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T01:51:52.605Z,1443491512.605 [AHRS_sp3003D] Loaded
2015-09-29T01:51:52.605Z,1443491512.605 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T01:51:52.801Z,1443491512.801 [DataOverHttps] Loaded
2015-09-29T01:51:52.801Z,1443491512.801 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T01:51:52.815Z,1443491512.815 [Depth_Keller] Loaded
2015-09-29T01:51:52.815Z,1443491512.815 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T01:51:52.821Z,1443491512.821 [DropWeight] Loaded
2015-09-29T01:51:52.821Z,1443491512.821 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T01:51:52.981Z,1443491512.981 [DVL_micro] Loaded
2015-09-29T01:51:52.982Z,1443491512.982 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T01:51:53.093Z,1443491513.093 [NAL9602] Loaded
2015-09-29T01:51:53.094Z,1443491513.094 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T01:51:53.142Z,1443491513.142 [Onboard] Loaded
2015-09-29T01:51:53.142Z,1443491513.142 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T01:51:53.154Z,1443491513.154 [Radio_Surface] Loaded
2015-09-29T01:51:53.154Z,1443491513.154 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T01:51:53.156Z,1443491513.156 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T01:51:53.156Z,1443491513.156 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T01:51:53.320Z,1443491513.320 [DAT] Loaded
2015-09-29T01:51:53.321Z,1443491513.321 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T01:51:53.328Z,1443491513.328 [SCPI] Loaded
2015-09-29T01:51:53.328Z,1443491513.328 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T01:51:53.329Z,1443491513.329 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T01:51:53.329Z,1443491513.329 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T01:51:53.468Z,1443491513.468 [BuoyancyServo] Loaded
2015-09-29T01:51:53.468Z,1443491513.468 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T01:51:53.481Z,1443491513.481 [ElevatorServo] Loaded
2015-09-29T01:51:53.482Z,1443491513.482 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T01:51:53.494Z,1443491513.494 [MassServo] Loaded
2015-09-29T01:51:53.494Z,1443491513.494 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T01:51:53.510Z,1443491513.510 [RudderServo] Loaded
2015-09-29T01:51:53.510Z,1443491513.510 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T01:51:53.522Z,1443491513.522 [ThrusterServo] Loaded
2015-09-29T01:51:53.522Z,1443491513.522 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T01:51:53.523Z,1443491513.523 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T01:51:53.524Z,1443491513.524 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T01:51:53.728Z,1443491513.728 [InternalSim] Loaded
2015-09-29T01:51:53.728Z,1443491513.728 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T01:51:53.729Z,1443491513.729 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T01:51:53.730Z,1443491513.730 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T01:51:53.774Z,1443491513.774 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T01:51:53.778Z,1443491513.778 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T01:51:53.779Z,1443491513.779 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T01:51:53.786Z,1443491513.786 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T01:51:53.788Z,1443491513.788 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T01:51:53.788Z,1443491513.788 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T01:51:53.793Z,1443491513.793 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T01:51:53.793Z,1443491513.793 [Supervisor](DEBUG): Running supervisor.
2015-09-29T01:51:53.794Z,1443491513.794 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T01:51:53.800Z,1443491513.800 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T01:51:53.801Z,1443491513.801 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T01:51:53.802Z,1443491513.802 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T01:51:53.804Z,1443491513.804 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T01:51:53.804Z,1443491513.804 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T01:51:53.805Z,1443491513.805 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T01:51:53.805Z,1443491513.805 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T01:51:53.806Z,1443491513.806 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T01:51:53.807Z,1443491513.807 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T01:51:53.808Z,1443491513.808 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T01:51:53.809Z,1443491513.809 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T01:51:53.809Z,1443491513.809 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T01:51:53.810Z,1443491513.810 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T01:51:53.810Z,1443491513.810 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T01:51:53.810Z,1443491513.810 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T01:51:53.811Z,1443491513.811 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T01:51:53.811Z,1443491513.811 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T01:51:53.811Z,1443491513.811 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T01:51:53.811Z,1443491513.811 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T01:51:53.812Z,1443491513.812 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T01:51:53.813Z,1443491513.813 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T01:51:53.813Z,1443491513.813 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T01:51:53.814Z,1443491513.814 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T01:51:53.814Z,1443491513.814 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T01:51:53.815Z,1443491513.815 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T01:51:53.815Z,1443491513.815 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T01:51:53.815Z,1443491513.815 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T01:51:53.816Z,1443491513.816 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T01:51:53.816Z,1443491513.816 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T01:51:53.822Z,1443491513.822 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T01:51:53.845Z,1443491513.845 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T01:51:53.884Z,1443491513.884 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T01:51:53.948Z,1443491513.948 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T01:51:53.956Z,1443491513.956 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T01:51:54.032Z,1443491514.032 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T01:51:54.035Z,1443491514.035 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T01:51:54.070Z,1443491514.070 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T01:51:54.072Z,1443491514.072 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T01:51:54.072Z,1443491514.072 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T01:51:54.073Z,1443491514.073 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T01:51:54.073Z,1443491514.073 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T01:51:54.073Z,1443491514.073 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T01:51:54.073Z,1443491514.073 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T01:51:54.074Z,1443491514.074 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T01:51:54.074Z,1443491514.074 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T01:51:54.114Z,1443491514.114 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T01:51:54.140Z,1443491514.140 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T01:51:54.141Z,1443491514.141 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T01:51:54.195Z,1443491514.195 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T01:51:54.216Z,1443491514.216 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T01:51:54.247Z,1443491514.247 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T01:51:54.249Z,1443491514.249 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T01:51:54.255Z,1443491514.255 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T01:51:54.279Z,1443491514.279 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T01:51:54.285Z,1443491514.285 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T01:51:54.509Z,1443491514.509 [DVL_micro](INFO): Initializing
2015-09-29T01:51:54.661Z,1443491514.661 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:51:54.685Z,1443491514.685 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:51:54.800Z,1443491514.800 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T01:51:54.806Z,1443491514.806 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T01:51:54.824Z,1443491514.824 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T01:51:54.839Z,1443491514.839 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T01:51:54.861Z,1443491514.861 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T01:51:55.114Z,1443491515.114 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:51:55.115Z,1443491515.115 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:52:04.223Z,1443491524.223 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:04.543Z,1443491524.543 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:04.692Z,1443491524.692 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:05.100Z,1443491525.100 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T01:52:05.103Z,1443491525.103 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:05.489Z,1443491525.489 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:05.890Z,1443491525.890 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:06.290Z,1443491526.290 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:06.689Z,1443491526.689 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:07.090Z,1443491527.090 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:07.489Z,1443491527.489 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:07.888Z,1443491527.888 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:08.289Z,1443491528.289 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:08.688Z,1443491528.688 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:09.089Z,1443491529.089 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:09.488Z,1443491529.488 [NAL9602](INFO): No messages in MT queue
2015-09-29T01:52:09.489Z,1443491529.489 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:09.888Z,1443491529.888 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:10.289Z,1443491530.289 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:10.689Z,1443491530.689 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:11.088Z,1443491531.088 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:11.489Z,1443491531.489 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:11.889Z,1443491531.889 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:12.289Z,1443491532.289 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:12.688Z,1443491532.688 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:13.089Z,1443491533.089 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:13.489Z,1443491533.489 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:13.888Z,1443491533.888 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:14.289Z,1443491534.289 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:14.303Z,1443491534.303 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T01:52:14.688Z,1443491534.688 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:15.089Z,1443491535.089 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:15.489Z,1443491535.489 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:15.889Z,1443491535.889 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:16.289Z,1443491536.289 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:16.689Z,1443491536.689 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:17.088Z,1443491537.088 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:17.489Z,1443491537.489 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:17.889Z,1443491537.889 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:18.289Z,1443491538.289 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:52:18.691Z,1443491538.691 [D