2015-09-29T01:43:57.014Z,1443491037.014 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T01:43:57.017Z,1443491037.017 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T01:43:57.018Z,1443491037.018 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T01:43:57.018Z,1443491037.018 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T01:43:57.020Z,1443491037.020 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T01:43:57.020Z,1443491037.020 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T01:43:57.023Z,1443491037.023 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T01:43:57.036Z,1443491037.036 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T01:43:57.040Z,1443491037.040 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T01:43:57.040Z,1443491037.040 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T01:43:57.041Z,1443491037.041 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T01:43:57.044Z,1443491037.044 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T01:43:57.044Z,1443491037.044 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T01:43:57.046Z,1443491037.046 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T01:43:57.047Z,1443491037.047 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T01:43:57.051Z,1443491037.051 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T01:43:57.493Z,1443491037.493 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T01:43:57.495Z,1443491037.495 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T01:43:57.697Z,1443491037.697 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T01:43:57.699Z,1443491037.699 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T01:43:57.857Z,1443491037.857 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T01:43:57.857Z,1443491037.857 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T01:43:58.013Z,1443491038.013 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T01:43:58.013Z,1443491038.013 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T01:43:58.113Z,1443491038.113 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T01:43:58.349Z,1443491038.349 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T01:43:58.350Z,1443491038.350 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T01:43:58.449Z,1443491038.449 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T01:43:58.449Z,1443491038.449 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T01:43:58.787Z,1443491038.787 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T01:43:58.788Z,1443491038.788 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T01:43:59.221Z,1443491039.221 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T01:43:59.222Z,1443491039.222 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T01:43:59.613Z,1443491039.613 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T01:43:59.615Z,1443491039.615 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T01:44:00.273Z,1443491040.273 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T01:44:00.274Z,1443491040.274 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T01:44:00.536Z,1443491040.536 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T01:44:00.536Z,1443491040.536 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T01:44:00.687Z,1443491040.687 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T01:44:00.688Z,1443491040.688 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T01:44:01.253Z,1443491041.253 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T01:44:01.254Z,1443491041.254 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T01:44:01.387Z,1443491041.387 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T01:44:01.389Z,1443491041.389 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T01:44:01.390Z,1443491041.390 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T01:44:01.394Z,1443491041.394 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T01:44:01.475Z,1443491041.475 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T01:44:01.622Z,1443491041.622 [VerticalControl] Loaded
2015-09-29T01:44:01.623Z,1443491041.623 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T01:44:01.624Z,1443491041.624 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T01:44:01.717Z,1443491041.717 [HorizontalControl] Loaded
2015-09-29T01:44:01.717Z,1443491041.717 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T01:44:01.718Z,1443491041.718 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T01:44:01.724Z,1443491041.724 [SpeedControl] Loaded
2015-09-29T01:44:01.724Z,1443491041.724 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T01:44:01.725Z,1443491041.725 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T01:44:01.726Z,1443491041.726 [LoopControl] Loaded
2015-09-29T01:44:01.726Z,1443491041.726 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T01:44:01.727Z,1443491041.727 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T01:44:01.727Z,1443491041.727 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T01:44:01.910Z,1443491041.910 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T01:44:01.923Z,1443491041.923 [SBIT] Loaded
2015-09-29T01:44:01.923Z,1443491041.923 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T01:44:01.924Z,1443491041.924 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T01:44:01.961Z,1443491041.961 [IBIT] Loaded
2015-09-29T01:44:01.961Z,1443491041.961 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T01:44:01.963Z,1443491041.963 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T01:44:02.134Z,1443491042.134 [CBIT] Loaded
2015-09-29T01:44:02.134Z,1443491042.134 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T01:44:02.135Z,1443491042.135 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T01:44:02.135Z,1443491042.135 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T01:44:02.179Z,1443491042.179 [DepthRateCalculator] Loaded
2015-09-29T01:44:02.179Z,1443491042.179 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T01:44:02.185Z,1443491042.185 [PitchRateCalculator] Loaded
2015-09-29T01:44:02.185Z,1443491042.185 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T01:44:02.198Z,1443491042.198 [SpeedCalculator] Loaded
2015-09-29T01:44:02.198Z,1443491042.198 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T01:44:02.222Z,1443491042.222 [TempGradientCalculator] Loaded
2015-09-29T01:44:02.222Z,1443491042.222 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T01:44:02.241Z,1443491042.241 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T01:44:02.241Z,1443491042.241 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T01:44:02.251Z,1443491042.251 [YawRateCalculator] Loaded
2015-09-29T01:44:02.251Z,1443491042.251 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T01:44:02.252Z,1443491042.252 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T01:44:02.253Z,1443491042.253 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T01:44:02.381Z,1443491042.381 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T01:44:02.382Z,1443491042.382 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T01:44:02.382Z,1443491042.382 [StratificationFrontDetector] Loaded
2015-09-29T01:44:02.382Z,1443491042.382 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T01:44:02.383Z,1443491042.383 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T01:44:02.383Z,1443491042.383 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T01:44:02.716Z,1443491042.716 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T01:44:02.716Z,1443491042.716 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T01:44:02.860Z,1443491042.860 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T01:44:02.861Z,1443491042.861 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T01:44:02.932Z,1443491042.932 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T01:44:02.932Z,1443491042.932 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T01:44:02.952Z,1443491042.952 [NavChart] Loaded
2015-09-29T01:44:02.952Z,1443491042.952 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T01:44:02.962Z,1443491042.962 [UniversalFixResidualReporter] Loaded
2015-09-29T01:44:02.962Z,1443491042.962 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T01:44:02.962Z,1443491042.962 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T01:44:02.963Z,1443491042.963 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T01:44:02.976Z,1443491042.976 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T01:44:02.977Z,1443491042.977 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T01:44:03.302Z,1443491043.302 [CTD_NeilBrown] Loaded
2015-09-29T01:44:03.303Z,1443491043.303 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T01:44:03.308Z,1443491043.308 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T01:44:03.308Z,1443491043.308 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T01:44:03.323Z,1443491043.323 [ISUS] Loaded
2015-09-29T01:44:03.323Z,1443491043.323 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T01:44:03.344Z,1443491043.344 [PAR_Licor] Loaded
2015-09-29T01:44:03.344Z,1443491043.344 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T01:44:03.410Z,1443491043.410 [WetLabsBB2FL] Loaded
2015-09-29T01:44:03.411Z,1443491043.411 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T01:44:03.412Z,1443491043.412 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T01:44:03.412Z,1443491043.412 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T01:44:03.413Z,1443491043.413 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T01:44:03.414Z,1443491043.414 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T01:44:04.168Z,1443491044.168 [AHRS_sp3003D] Loaded
2015-09-29T01:44:04.169Z,1443491044.169 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T01:44:04.366Z,1443491044.366 [DataOverHttps] Loaded
2015-09-29T01:44:04.366Z,1443491044.366 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T01:44:04.385Z,1443491044.385 [Depth_Keller] Loaded
2015-09-29T01:44:04.386Z,1443491044.386 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T01:44:04.391Z,1443491044.391 [DropWeight] Loaded
2015-09-29T01:44:04.392Z,1443491044.392 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T01:44:04.565Z,1443491044.565 [DVL_micro] Loaded
2015-09-29T01:44:04.565Z,1443491044.565 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T01:44:04.685Z,1443491044.685 [NAL9602] Loaded
2015-09-29T01:44:04.686Z,1443491044.686 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T01:44:04.737Z,1443491044.737 [Onboard] Loaded
2015-09-29T01:44:04.738Z,1443491044.738 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T01:44:04.751Z,1443491044.751 [Radio_Surface] Loaded
2015-09-29T01:44:04.751Z,1443491044.751 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T01:44:04.760Z,1443491044.760 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T01:44:04.760Z,1443491044.760 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T01:44:04.937Z,1443491044.937 [DAT] Loaded
2015-09-29T01:44:04.937Z,1443491044.937 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T01:44:04.945Z,1443491044.945 [SCPI] Loaded
2015-09-29T01:44:04.945Z,1443491044.945 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T01:44:04.946Z,1443491044.946 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T01:44:04.946Z,1443491044.946 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T01:44:05.094Z,1443491045.094 [BuoyancyServo] Loaded
2015-09-29T01:44:05.094Z,1443491045.094 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T01:44:05.108Z,1443491045.108 [ElevatorServo] Loaded
2015-09-29T01:44:05.108Z,1443491045.108 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T01:44:05.125Z,1443491045.125 [MassServo] Loaded
2015-09-29T01:44:05.125Z,1443491045.125 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T01:44:05.138Z,1443491045.138 [RudderServo] Loaded
2015-09-29T01:44:05.138Z,1443491045.138 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T01:44:05.150Z,1443491045.150 [ThrusterServo] Loaded
2015-09-29T01:44:05.151Z,1443491045.151 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T01:44:05.151Z,1443491045.151 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T01:44:05.152Z,1443491045.152 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T01:44:05.381Z,1443491045.381 [InternalSim] Loaded
2015-09-29T01:44:05.381Z,1443491045.381 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T01:44:05.382Z,1443491045.382 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T01:44:05.383Z,1443491045.383 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T01:44:05.428Z,1443491045.428 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T01:44:05.432Z,1443491045.432 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T01:44:05.433Z,1443491045.433 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T01:44:05.440Z,1443491045.440 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T01:44:05.444Z,1443491045.444 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T01:44:05.444Z,1443491045.444 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T01:44:05.449Z,1443491045.449 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T01:44:05.449Z,1443491045.449 [Supervisor](DEBUG): Running supervisor.
2015-09-29T01:44:05.450Z,1443491045.450 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T01:44:05.456Z,1443491045.456 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T01:44:05.457Z,1443491045.457 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T01:44:05.458Z,1443491045.458 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T01:44:05.460Z,1443491045.460 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T01:44:05.460Z,1443491045.460 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T01:44:05.461Z,1443491045.461 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T01:44:05.461Z,1443491045.461 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T01:44:05.462Z,1443491045.462 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T01:44:05.463Z,1443491045.463 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T01:44:05.464Z,1443491045.464 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T01:44:05.465Z,1443491045.465 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T01:44:05.465Z,1443491045.465 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T01:44:05.466Z,1443491045.466 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T01:44:05.466Z,1443491045.466 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T01:44:05.466Z,1443491045.466 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T01:44:05.467Z,1443491045.467 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T01:44:05.467Z,1443491045.467 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T01:44:05.467Z,1443491045.467 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T01:44:05.467Z,1443491045.467 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T01:44:05.468Z,1443491045.468 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T01:44:05.469Z,1443491045.469 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T01:44:05.469Z,1443491045.469 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T01:44:05.470Z,1443491045.470 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T01:44:05.470Z,1443491045.470 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T01:44:05.471Z,1443491045.471 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T01:44:05.471Z,1443491045.471 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T01:44:05.471Z,1443491045.471 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T01:44:05.472Z,1443491045.472 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T01:44:05.472Z,1443491045.472 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T01:44:05.478Z,1443491045.478 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T01:44:05.500Z,1443491045.500 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T01:44:05.540Z,1443491045.540 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T01:44:05.616Z,1443491045.616 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T01:44:05.624Z,1443491045.624 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T01:44:05.688Z,1443491045.688 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T01:44:05.696Z,1443491045.696 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T01:44:05.698Z,1443491045.698 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T01:44:05.699Z,1443491045.699 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T01:44:05.699Z,1443491045.699 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T01:44:05.699Z,1443491045.699 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T01:44:05.699Z,1443491045.699 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T01:44:05.700Z,1443491045.700 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T01:44:05.700Z,1443491045.700 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T01:44:05.700Z,1443491045.700 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T01:44:05.713Z,1443491045.713 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T01:44:05.797Z,1443491045.797 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T01:44:05.807Z,1443491045.807 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T01:44:05.828Z,1443491045.828 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T01:44:05.885Z,1443491045.885 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T01:44:05.887Z,1443491045.887 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T01:44:05.940Z,1443491045.940 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T01:44:05.943Z,1443491045.943 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T01:44:05.965Z,1443491045.965 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T01:44:05.980Z,1443491045.980 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T01:44:05.986Z,1443491045.986 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T01:44:06.249Z,1443491046.249 [DVL_micro](INFO): Initializing
2015-09-29T01:44:06.425Z,1443491046.425 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:44:06.460Z,1443491046.460 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:44:06.575Z,1443491046.575 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T01:44:06.602Z,1443491046.602 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T01:44:06.611Z,1443491046.611 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T01:44:06.632Z,1443491046.632 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T01:44:06.652Z,1443491046.652 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T01:44:06.897Z,1443491046.897 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:44:06.898Z,1443491046.898 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:44:15.972Z,1443491055.972 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:16.311Z,1443491056.311 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:16.447Z,1443491056.447 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:16.848Z,1443491056.848 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003400
2015-09-29T01:44:16.851Z,1443491056.851 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:17.246Z,1443491057.246 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:17.645Z,1443491057.645 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:18.045Z,1443491058.045 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:18.446Z,1443491058.446 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:18.845Z,1443491058.845 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:19.245Z,1443491059.245 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:19.645Z,1443491059.645 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:20.046Z,1443491060.046 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:20.444Z,1443491060.444 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:20.844Z,1443491060.844 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:21.244Z,1443491061.244 [NAL9602](INFO): No messages in MT queue
2015-09-29T01:44:21.245Z,1443491061.245 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:21.645Z,1443491061.645 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:22.045Z,1443491062.045 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:22.444Z,1443491062.444 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:22.844Z,1443491062.844 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:23.245Z,1443491063.245 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:23.644Z,1443491063.644 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:24.046Z,1443491064.046 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:24.444Z,1443491064.444 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:24.845Z,1443491064.845 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:25.244Z,1443491065.244 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:25.644Z,1443491065.644 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:26.044Z,1443491066.044 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:26.058Z,1443491066.058 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T01:44:26.445Z,1443491066.445 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:26.845Z,1443491066.845 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:27.245Z,1443491067.245 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:27.645Z,1443491067.645 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:28.045Z,1443491068.045 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:28.445Z,1443491068.445 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:28.844Z,1443491068.844 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:29.245Z,1443491069.245 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:29.645Z,1443491069.645 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:30.044Z,1443491070.044 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:44:30.445Z,1443491070.445 [D