2015-09-29T01:28:03.043Z,1443490083.043 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T01:28:03.047Z,1443490083.047 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T01:28:03.047Z,1443490083.047 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T01:28:03.048Z,1443490083.048 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T01:28:03.051Z,1443490083.051 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T01:28:03.052Z,1443490083.052 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T01:28:03.055Z,1443490083.055 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T01:28:03.067Z,1443490083.067 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T01:28:03.071Z,1443490083.071 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T01:28:03.072Z,1443490083.072 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T01:28:03.073Z,1443490083.073 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T01:28:03.075Z,1443490083.075 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T01:28:03.076Z,1443490083.076 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T01:28:03.078Z,1443490083.078 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T01:28:03.078Z,1443490083.078 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T01:28:03.082Z,1443490083.082 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T01:28:03.465Z,1443490083.465 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T01:28:03.467Z,1443490083.467 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T01:28:03.655Z,1443490083.655 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T01:28:03.657Z,1443490083.657 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T01:28:03.808Z,1443490083.808 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T01:28:03.809Z,1443490083.809 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T01:28:03.956Z,1443490083.956 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T01:28:03.957Z,1443490083.957 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T01:28:04.051Z,1443490084.051 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T01:28:04.268Z,1443490084.268 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T01:28:04.269Z,1443490084.269 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T01:28:04.364Z,1443490084.364 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T01:28:04.365Z,1443490084.365 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T01:28:04.676Z,1443490084.676 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T01:28:04.677Z,1443490084.677 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T01:28:05.073Z,1443490085.073 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T01:28:05.073Z,1443490085.073 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T01:28:05.421Z,1443490085.421 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T01:28:05.423Z,1443490085.423 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T01:28:06.011Z,1443490086.011 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T01:28:06.012Z,1443490086.012 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T01:28:06.240Z,1443490086.240 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T01:28:06.241Z,1443490086.241 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T01:28:06.360Z,1443490086.360 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T01:28:06.361Z,1443490086.361 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T01:28:06.872Z,1443490086.872 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T01:28:06.872Z,1443490086.872 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T01:28:07.025Z,1443490087.025 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T01:28:07.027Z,1443490087.027 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T01:28:07.027Z,1443490087.027 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T01:28:07.032Z,1443490087.032 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T01:28:07.105Z,1443490087.105 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T01:28:07.238Z,1443490087.238 [VerticalControl] Loaded
2015-09-29T01:28:07.238Z,1443490087.238 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T01:28:07.239Z,1443490087.239 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T01:28:07.323Z,1443490087.323 [HorizontalControl] Loaded
2015-09-29T01:28:07.323Z,1443490087.323 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T01:28:07.324Z,1443490087.324 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T01:28:07.330Z,1443490087.330 [SpeedControl] Loaded
2015-09-29T01:28:07.330Z,1443490087.330 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T01:28:07.331Z,1443490087.331 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T01:28:07.331Z,1443490087.331 [LoopControl] Loaded
2015-09-29T01:28:07.332Z,1443490087.332 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T01:28:07.332Z,1443490087.332 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T01:28:07.333Z,1443490087.333 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T01:28:07.489Z,1443490087.489 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T01:28:07.501Z,1443490087.501 [SBIT] Loaded
2015-09-29T01:28:07.502Z,1443490087.502 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T01:28:07.502Z,1443490087.502 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T01:28:07.536Z,1443490087.536 [IBIT] Loaded
2015-09-29T01:28:07.536Z,1443490087.536 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T01:28:07.538Z,1443490087.538 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T01:28:07.691Z,1443490087.691 [CBIT] Loaded
2015-09-29T01:28:07.691Z,1443490087.691 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T01:28:07.692Z,1443490087.692 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T01:28:07.693Z,1443490087.693 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T01:28:07.736Z,1443490087.736 [DepthRateCalculator] Loaded
2015-09-29T01:28:07.737Z,1443490087.737 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T01:28:07.742Z,1443490087.742 [PitchRateCalculator] Loaded
2015-09-29T01:28:07.742Z,1443490087.742 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T01:28:07.754Z,1443490087.754 [SpeedCalculator] Loaded
2015-09-29T01:28:07.754Z,1443490087.754 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T01:28:07.771Z,1443490087.771 [TempGradientCalculator] Loaded
2015-09-29T01:28:07.772Z,1443490087.772 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T01:28:07.793Z,1443490087.793 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T01:28:07.793Z,1443490087.793 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T01:28:07.798Z,1443490087.798 [YawRateCalculator] Loaded
2015-09-29T01:28:07.798Z,1443490087.798 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T01:28:07.799Z,1443490087.799 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T01:28:07.804Z,1443490087.804 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T01:28:07.926Z,1443490087.926 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T01:28:07.926Z,1443490087.926 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T01:28:07.926Z,1443490087.926 [StratificationFrontDetector] Loaded
2015-09-29T01:28:07.926Z,1443490087.926 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T01:28:07.927Z,1443490087.927 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T01:28:07.928Z,1443490087.928 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T01:28:08.216Z,1443490088.216 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T01:28:08.216Z,1443490088.216 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T01:28:08.343Z,1443490088.343 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T01:28:08.347Z,1443490088.347 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T01:28:08.408Z,1443490088.408 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T01:28:08.408Z,1443490088.408 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T01:28:08.426Z,1443490088.426 [NavChart] Loaded
2015-09-29T01:28:08.426Z,1443490088.426 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T01:28:08.435Z,1443490088.435 [UniversalFixResidualReporter] Loaded
2015-09-29T01:28:08.436Z,1443490088.436 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T01:28:08.436Z,1443490088.436 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T01:28:08.437Z,1443490088.437 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T01:28:08.445Z,1443490088.445 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T01:28:08.446Z,1443490088.446 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T01:28:08.744Z,1443490088.744 [CTD_NeilBrown] Loaded
2015-09-29T01:28:08.744Z,1443490088.744 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T01:28:08.747Z,1443490088.747 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T01:28:08.748Z,1443490088.748 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T01:28:08.760Z,1443490088.760 [ISUS] Loaded
2015-09-29T01:28:08.761Z,1443490088.761 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T01:28:08.779Z,1443490088.779 [PAR_Licor] Loaded
2015-09-29T01:28:08.780Z,1443490088.780 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T01:28:08.835Z,1443490088.835 [WetLabsBB2FL] Loaded
2015-09-29T01:28:08.836Z,1443490088.836 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T01:28:08.839Z,1443490088.839 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T01:28:08.840Z,1443490088.840 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T01:28:08.840Z,1443490088.840 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T01:28:08.841Z,1443490088.841 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T01:28:09.572Z,1443490089.572 [AHRS_sp3003D] Loaded
2015-09-29T01:28:09.572Z,1443490089.572 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T01:28:09.761Z,1443490089.761 [DataOverHttps] Loaded
2015-09-29T01:28:09.761Z,1443490089.761 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T01:28:09.775Z,1443490089.775 [Depth_Keller] Loaded
2015-09-29T01:28:09.775Z,1443490089.775 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T01:28:09.780Z,1443490089.780 [DropWeight] Loaded
2015-09-29T01:28:09.780Z,1443490089.780 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T01:28:09.934Z,1443490089.934 [DVL_micro] Loaded
2015-09-29T01:28:09.934Z,1443490089.934 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T01:28:10.037Z,1443490090.037 [NAL9602] Loaded
2015-09-29T01:28:10.038Z,1443490090.038 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T01:28:10.089Z,1443490090.089 [Onboard] Loaded
2015-09-29T01:28:10.089Z,1443490090.089 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T01:28:10.101Z,1443490090.101 [Radio_Surface] Loaded
2015-09-29T01:28:10.101Z,1443490090.101 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T01:28:10.103Z,1443490090.103 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T01:28:10.104Z,1443490090.104 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T01:28:10.262Z,1443490090.262 [DAT] Loaded
2015-09-29T01:28:10.262Z,1443490090.262 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T01:28:10.269Z,1443490090.269 [SCPI] Loaded
2015-09-29T01:28:10.269Z,1443490090.269 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T01:28:10.270Z,1443490090.270 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T01:28:10.271Z,1443490090.271 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T01:28:10.402Z,1443490090.402 [BuoyancyServo] Loaded
2015-09-29T01:28:10.402Z,1443490090.402 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T01:28:10.416Z,1443490090.416 [ElevatorServo] Loaded
2015-09-29T01:28:10.416Z,1443490090.416 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T01:28:10.432Z,1443490090.432 [MassServo] Loaded
2015-09-29T01:28:10.432Z,1443490090.432 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T01:28:10.444Z,1443490090.444 [RudderServo] Loaded
2015-09-29T01:28:10.444Z,1443490090.444 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T01:28:10.460Z,1443490090.460 [ThrusterServo] Loaded
2015-09-29T01:28:10.460Z,1443490090.460 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T01:28:10.460Z,1443490090.460 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T01:28:10.461Z,1443490090.461 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T01:28:10.660Z,1443490090.660 [InternalSim] Loaded
2015-09-29T01:28:10.661Z,1443490090.661 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T01:28:10.661Z,1443490090.661 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T01:28:10.662Z,1443490090.662 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T01:28:10.705Z,1443490090.705 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T01:28:10.709Z,1443490090.709 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T01:28:10.710Z,1443490090.710 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T01:28:10.720Z,1443490090.720 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T01:28:10.723Z,1443490090.723 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T01:28:10.724Z,1443490090.724 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T01:28:10.729Z,1443490090.729 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T01:28:10.729Z,1443490090.729 [Supervisor](DEBUG): Running supervisor.
2015-09-29T01:28:10.729Z,1443490090.729 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T01:28:10.736Z,1443490090.736 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T01:28:10.736Z,1443490090.736 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T01:28:10.737Z,1443490090.737 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T01:28:10.739Z,1443490090.739 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T01:28:10.740Z,1443490090.740 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T01:28:10.740Z,1443490090.740 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T01:28:10.741Z,1443490090.741 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T01:28:10.741Z,1443490090.741 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T01:28:10.743Z,1443490090.743 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T01:28:10.743Z,1443490090.743 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T01:28:10.744Z,1443490090.744 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T01:28:10.744Z,1443490090.744 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T01:28:10.745Z,1443490090.745 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T01:28:10.745Z,1443490090.745 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T01:28:10.746Z,1443490090.746 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T01:28:10.746Z,1443490090.746 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T01:28:10.746Z,1443490090.746 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T01:28:10.747Z,1443490090.747 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T01:28:10.747Z,1443490090.747 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T01:28:10.747Z,1443490090.747 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T01:28:10.748Z,1443490090.748 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T01:28:10.749Z,1443490090.749 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T01:28:10.749Z,1443490090.749 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T01:28:10.750Z,1443490090.750 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T01:28:10.750Z,1443490090.750 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T01:28:10.750Z,1443490090.750 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T01:28:10.751Z,1443490090.751 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T01:28:10.751Z,1443490090.751 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T01:28:10.752Z,1443490090.752 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T01:28:10.756Z,1443490090.756 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T01:28:10.788Z,1443490090.788 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T01:28:10.881Z,1443490090.881 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T01:28:10.888Z,1443490090.888 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T01:28:10.934Z,1443490090.934 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T01:28:10.944Z,1443490090.944 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T01:28:10.960Z,1443490090.960 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T01:28:10.974Z,1443490090.974 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T01:28:10.976Z,1443490090.976 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T01:28:10.976Z,1443490090.976 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T01:28:10.976Z,1443490090.976 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T01:28:10.977Z,1443490090.977 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T01:28:10.977Z,1443490090.977 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T01:28:10.977Z,1443490090.977 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T01:28:10.977Z,1443490090.977 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T01:28:10.977Z,1443490090.977 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T01:28:11.041Z,1443490091.041 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T01:28:11.080Z,1443490091.080 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T01:28:11.080Z,1443490091.080 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T01:28:11.159Z,1443490091.159 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T01:28:11.160Z,1443490091.160 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T01:28:11.195Z,1443490091.195 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T01:28:11.210Z,1443490091.210 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T01:28:11.232Z,1443490091.232 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T01:28:11.235Z,1443490091.235 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T01:28:11.261Z,1443490091.261 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T01:28:11.563Z,1443490091.563 [DVL_micro](INFO): Initializing
2015-09-29T01:28:11.732Z,1443490091.732 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:28:11.739Z,1443490091.739 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:28:11.855Z,1443490091.855 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T01:28:11.865Z,1443490091.865 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T01:28:11.883Z,1443490091.883 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T01:28:11.891Z,1443490091.891 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T01:28:11.911Z,1443490091.911 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T01:28:12.177Z,1443490092.177 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:28:12.178Z,1443490092.178 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:28:21.333Z,1443490101.333 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:21.659Z,1443490101.659 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:21.802Z,1443490101.802 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:22.205Z,1443490102.205 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003200
2015-09-29T01:28:22.208Z,1443490102.208 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:22.601Z,1443490102.601 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:23.001Z,1443490103.001 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:23.400Z,1443490103.400 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:23.801Z,1443490103.801 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:24.200Z,1443490104.200 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:24.600Z,1443490104.600 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:25.002Z,1443490105.002 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:25.403Z,1443490105.403 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:25.803Z,1443490105.803 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:26.201Z,1443490106.201 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:26.610Z,1443490106.610 [NAL9602](INFO): No messages in MT queue
2015-09-29T01:28:26.611Z,1443490106.611 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:27.009Z,1443490107.009 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:27.410Z,1443490107.410 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:27.810Z,1443490107.810 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:28.210Z,1443490108.210 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:28.609Z,1443490108.609 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:29.010Z,1443490109.010 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:29.410Z,1443490109.410 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:29.809Z,1443490109.809 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:30.200Z,1443490110.200 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:30.610Z,1443490110.610 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:31.009Z,1443490111.009 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:31.404Z,1443490111.404 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:31.419Z,1443490111.419 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T01:28:31.800Z,1443490111.800 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:32.200Z,1443490112.200 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:32.600Z,1443490112.600 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:33.001Z,1443490113.001 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:33.400Z,1443490113.400 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:33.800Z,1443490113.800 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:34.200Z,1443490114.200 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:34.600Z,1443490114.600 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:35.000Z,1443490115.000 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:35.400Z,1443490115.400 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:28:35.800Z,1443490115.800 [D