2015-09-29T01:20:09.026Z,1443489609.026 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T01:20:09.029Z,1443489609.029 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T01:20:09.029Z,1443489609.029 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T01:20:09.030Z,1443489609.030 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T01:20:09.033Z,1443489609.033 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T01:20:09.033Z,1443489609.033 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T01:20:09.036Z,1443489609.036 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T01:20:09.048Z,1443489609.048 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T01:20:09.053Z,1443489609.053 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T01:20:09.053Z,1443489609.053 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T01:20:09.054Z,1443489609.054 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T01:20:09.057Z,1443489609.057 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T01:20:09.057Z,1443489609.057 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T01:20:09.059Z,1443489609.059 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T01:20:09.060Z,1443489609.060 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T01:20:09.064Z,1443489609.064 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T01:20:09.466Z,1443489609.466 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T01:20:09.468Z,1443489609.468 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T01:20:09.664Z,1443489609.664 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T01:20:09.666Z,1443489609.666 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T01:20:09.814Z,1443489609.814 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T01:20:09.814Z,1443489609.814 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T01:20:09.966Z,1443489609.966 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T01:20:09.966Z,1443489609.966 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T01:20:10.062Z,1443489610.062 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T01:20:10.290Z,1443489610.290 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T01:20:10.290Z,1443489610.290 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T01:20:10.385Z,1443489610.385 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T01:20:10.386Z,1443489610.386 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T01:20:10.710Z,1443489610.710 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T01:20:10.711Z,1443489610.711 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T01:20:11.114Z,1443489611.114 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T01:20:11.115Z,1443489611.115 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T01:20:11.483Z,1443489611.483 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T01:20:11.485Z,1443489611.485 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T01:20:12.094Z,1443489612.094 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T01:20:12.095Z,1443489612.095 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T01:20:12.334Z,1443489612.334 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T01:20:12.335Z,1443489612.335 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T01:20:12.461Z,1443489612.461 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T01:20:12.462Z,1443489612.462 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T01:20:13.042Z,1443489613.042 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T01:20:13.043Z,1443489613.043 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T01:20:13.170Z,1443489613.170 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T01:20:13.172Z,1443489613.172 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T01:20:13.172Z,1443489613.172 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T01:20:13.177Z,1443489613.177 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T01:20:13.251Z,1443489613.251 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T01:20:13.386Z,1443489613.386 [VerticalControl] Loaded
2015-09-29T01:20:13.386Z,1443489613.386 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T01:20:13.387Z,1443489613.387 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T01:20:13.468Z,1443489613.468 [HorizontalControl] Loaded
2015-09-29T01:20:13.469Z,1443489613.469 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T01:20:13.469Z,1443489613.469 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T01:20:13.480Z,1443489613.480 [SpeedControl] Loaded
2015-09-29T01:20:13.480Z,1443489613.480 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T01:20:13.480Z,1443489613.480 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T01:20:13.481Z,1443489613.481 [LoopControl] Loaded
2015-09-29T01:20:13.481Z,1443489613.481 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T01:20:13.482Z,1443489613.482 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T01:20:13.483Z,1443489613.483 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T01:20:13.642Z,1443489613.642 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T01:20:13.655Z,1443489613.655 [SBIT] Loaded
2015-09-29T01:20:13.655Z,1443489613.655 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T01:20:13.656Z,1443489613.656 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T01:20:13.690Z,1443489613.690 [IBIT] Loaded
2015-09-29T01:20:13.690Z,1443489613.690 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T01:20:13.692Z,1443489613.692 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T01:20:13.848Z,1443489613.848 [CBIT] Loaded
2015-09-29T01:20:13.848Z,1443489613.848 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T01:20:13.848Z,1443489613.848 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T01:20:13.849Z,1443489613.849 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T01:20:13.886Z,1443489613.886 [DepthRateCalculator] Loaded
2015-09-29T01:20:13.887Z,1443489613.887 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T01:20:13.896Z,1443489613.896 [PitchRateCalculator] Loaded
2015-09-29T01:20:13.897Z,1443489613.897 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T01:20:13.908Z,1443489613.908 [SpeedCalculator] Loaded
2015-09-29T01:20:13.908Z,1443489613.908 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T01:20:13.930Z,1443489613.930 [TempGradientCalculator] Loaded
2015-09-29T01:20:13.930Z,1443489613.930 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T01:20:13.947Z,1443489613.947 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T01:20:13.948Z,1443489613.948 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T01:20:13.953Z,1443489613.953 [YawRateCalculator] Loaded
2015-09-29T01:20:13.953Z,1443489613.953 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T01:20:13.954Z,1443489613.954 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T01:20:13.955Z,1443489613.955 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T01:20:14.078Z,1443489614.078 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T01:20:14.078Z,1443489614.078 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T01:20:14.079Z,1443489614.079 [StratificationFrontDetector] Loaded
2015-09-29T01:20:14.079Z,1443489614.079 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T01:20:14.079Z,1443489614.079 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T01:20:14.080Z,1443489614.080 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T01:20:14.373Z,1443489614.373 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T01:20:14.373Z,1443489614.373 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T01:20:14.506Z,1443489614.506 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T01:20:14.507Z,1443489614.507 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T01:20:14.572Z,1443489614.572 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T01:20:14.572Z,1443489614.572 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T01:20:14.594Z,1443489614.594 [NavChart] Loaded
2015-09-29T01:20:14.595Z,1443489614.595 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T01:20:14.600Z,1443489614.600 [UniversalFixResidualReporter] Loaded
2015-09-29T01:20:14.600Z,1443489614.600 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T01:20:14.601Z,1443489614.601 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T01:20:14.602Z,1443489614.602 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T01:20:14.614Z,1443489614.614 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T01:20:14.615Z,1443489614.615 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T01:20:14.914Z,1443489614.914 [CTD_NeilBrown] Loaded
2015-09-29T01:20:14.914Z,1443489614.914 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T01:20:14.917Z,1443489614.917 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T01:20:14.917Z,1443489614.917 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T01:20:14.930Z,1443489614.930 [ISUS] Loaded
2015-09-29T01:20:14.930Z,1443489614.930 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T01:20:14.949Z,1443489614.949 [PAR_Licor] Loaded
2015-09-29T01:20:14.950Z,1443489614.950 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T01:20:15.006Z,1443489615.006 [WetLabsBB2FL] Loaded
2015-09-29T01:20:15.006Z,1443489615.006 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T01:20:15.009Z,1443489615.009 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T01:20:15.009Z,1443489615.009 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T01:20:15.010Z,1443489615.010 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T01:20:15.011Z,1443489615.011 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T01:20:15.745Z,1443489615.745 [AHRS_sp3003D] Loaded
2015-09-29T01:20:15.745Z,1443489615.745 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T01:20:15.956Z,1443489615.956 [DataOverHttps] Loaded
2015-09-29T01:20:15.956Z,1443489615.956 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T01:20:15.974Z,1443489615.974 [Depth_Keller] Loaded
2015-09-29T01:20:15.974Z,1443489615.974 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T01:20:15.979Z,1443489615.979 [DropWeight] Loaded
2015-09-29T01:20:15.980Z,1443489615.980 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T01:20:16.133Z,1443489616.133 [DVL_micro] Loaded
2015-09-29T01:20:16.133Z,1443489616.133 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T01:20:16.242Z,1443489616.242 [NAL9602] Loaded
2015-09-29T01:20:16.243Z,1443489616.243 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T01:20:16.290Z,1443489616.290 [Onboard] Loaded
2015-09-29T01:20:16.290Z,1443489616.290 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T01:20:16.306Z,1443489616.306 [Radio_Surface] Loaded
2015-09-29T01:20:16.307Z,1443489616.307 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T01:20:16.309Z,1443489616.309 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T01:20:16.309Z,1443489616.309 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T01:20:16.466Z,1443489616.466 [DAT] Loaded
2015-09-29T01:20:16.466Z,1443489616.466 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T01:20:16.477Z,1443489616.477 [SCPI] Loaded
2015-09-29T01:20:16.477Z,1443489616.477 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T01:20:16.478Z,1443489616.478 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T01:20:16.479Z,1443489616.479 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T01:20:16.614Z,1443489616.614 [BuoyancyServo] Loaded
2015-09-29T01:20:16.614Z,1443489616.614 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T01:20:16.627Z,1443489616.627 [ElevatorServo] Loaded
2015-09-29T01:20:16.628Z,1443489616.628 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T01:20:16.639Z,1443489616.639 [MassServo] Loaded
2015-09-29T01:20:16.640Z,1443489616.640 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T01:20:16.652Z,1443489616.652 [RudderServo] Loaded
2015-09-29T01:20:16.652Z,1443489616.652 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T01:20:16.668Z,1443489616.668 [ThrusterServo] Loaded
2015-09-29T01:20:16.668Z,1443489616.668 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T01:20:16.668Z,1443489616.668 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T01:20:16.669Z,1443489616.669 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T01:20:16.863Z,1443489616.863 [InternalSim] Loaded
2015-09-29T01:20:16.863Z,1443489616.863 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T01:20:16.863Z,1443489616.863 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T01:20:16.864Z,1443489616.864 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T01:20:16.909Z,1443489616.909 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T01:20:16.914Z,1443489616.914 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T01:20:16.914Z,1443489616.914 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T01:20:16.921Z,1443489616.921 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T01:20:16.925Z,1443489616.925 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T01:20:16.925Z,1443489616.925 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T01:20:16.930Z,1443489616.930 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T01:20:16.930Z,1443489616.930 [Supervisor](DEBUG): Running supervisor.
2015-09-29T01:20:16.931Z,1443489616.931 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T01:20:16.937Z,1443489616.937 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T01:20:16.938Z,1443489616.938 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T01:20:16.939Z,1443489616.939 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T01:20:16.941Z,1443489616.941 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T01:20:16.941Z,1443489616.941 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T01:20:16.942Z,1443489616.942 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T01:20:16.942Z,1443489616.942 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T01:20:16.943Z,1443489616.943 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T01:20:16.944Z,1443489616.944 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T01:20:16.945Z,1443489616.945 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T01:20:16.946Z,1443489616.946 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T01:20:16.946Z,1443489616.946 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T01:20:16.947Z,1443489616.947 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T01:20:16.947Z,1443489616.947 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T01:20:16.947Z,1443489616.947 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T01:20:16.948Z,1443489616.948 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T01:20:16.948Z,1443489616.948 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T01:20:16.948Z,1443489616.948 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T01:20:16.948Z,1443489616.948 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T01:20:16.949Z,1443489616.949 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T01:20:16.950Z,1443489616.950 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T01:20:16.950Z,1443489616.950 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T01:20:16.951Z,1443489616.951 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T01:20:16.951Z,1443489616.951 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T01:20:16.952Z,1443489616.952 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T01:20:16.952Z,1443489616.952 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T01:20:16.952Z,1443489616.952 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T01:20:16.953Z,1443489616.953 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T01:20:16.953Z,1443489616.953 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T01:20:16.959Z,1443489616.959 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T01:20:16.981Z,1443489616.981 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T01:20:17.021Z,1443489617.021 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T01:20:17.097Z,1443489617.097 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T01:20:17.105Z,1443489617.105 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T01:20:17.174Z,1443489617.174 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T01:20:17.183Z,1443489617.183 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T01:20:17.185Z,1443489617.185 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T01:20:17.185Z,1443489617.185 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T01:20:17.185Z,1443489617.185 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T01:20:17.186Z,1443489617.186 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T01:20:17.186Z,1443489617.186 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T01:20:17.186Z,1443489617.186 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T01:20:17.186Z,1443489617.186 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T01:20:17.187Z,1443489617.187 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T01:20:17.210Z,1443489617.210 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T01:20:17.266Z,1443489617.266 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T01:20:17.284Z,1443489617.284 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T01:20:17.302Z,1443489617.302 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T01:20:17.361Z,1443489617.361 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T01:20:17.363Z,1443489617.363 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T01:20:17.401Z,1443489617.401 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T01:20:17.416Z,1443489617.416 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T01:20:17.443Z,1443489617.443 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T01:20:17.446Z,1443489617.446 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T01:20:17.454Z,1443489617.454 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T01:20:17.658Z,1443489617.658 [DVL_micro](INFO): Initializing
2015-09-29T01:20:17.806Z,1443489617.806 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:20:17.838Z,1443489617.838 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:20:17.969Z,1443489617.969 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T01:20:17.981Z,1443489617.981 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T01:20:17.997Z,1443489617.997 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T01:20:18.009Z,1443489618.009 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T01:20:18.038Z,1443489618.038 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T01:20:18.263Z,1443489618.263 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:20:18.264Z,1443489618.264 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T01:20:27.231Z,1443489627.231 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:27.536Z,1443489627.536 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:27.691Z,1443489627.691 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:28.092Z,1443489628.092 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T01:20:28.096Z,1443489628.096 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:28.491Z,1443489628.491 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:28.890Z,1443489628.890 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:29.291Z,1443489629.291 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:29.690Z,1443489629.690 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:30.089Z,1443489630.089 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:30.490Z,1443489630.490 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:30.889Z,1443489630.889 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:31.293Z,1443489631.293 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:31.692Z,1443489631.692 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:32.091Z,1443489632.091 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:32.499Z,1443489632.499 [NAL9602](INFO): No messages in MT queue
2015-09-29T01:20:32.500Z,1443489632.500 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:32.899Z,1443489632.899 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:33.299Z,1443489633.299 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:33.689Z,1443489633.689 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:34.099Z,1443489634.099 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:34.500Z,1443489634.500 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:34.900Z,1443489634.900 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:35.299Z,1443489635.299 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:35.699Z,1443489635.699 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:36.099Z,1443489636.099 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:36.499Z,1443489636.499 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:36.899Z,1443489636.899 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:37.300Z,1443489637.300 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:37.699Z,1443489637.699 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:37.715Z,1443489637.715 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T01:20:38.089Z,1443489638.089 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:38.490Z,1443489638.490 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:38.889Z,1443489638.889 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:39.312Z,1443489639.312 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:39.691Z,1443489639.691 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:40.090Z,1443489640.090 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:40.490Z,1443489640.490 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:40.890Z,1443489640.890 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:41.290Z,1443489641.290 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T01:20:41.690Z,1443489641.690 [D