2015-09-29T00:56:26.399Z,1443488186.399 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T00:56:26.401Z,1443488186.401 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T00:56:26.402Z,1443488186.402 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T00:56:26.402Z,1443488186.402 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T00:56:26.403Z,1443488186.403 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T00:56:26.404Z,1443488186.404 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T00:56:26.406Z,1443488186.406 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T00:56:26.419Z,1443488186.419 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T00:56:26.420Z,1443488186.420 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T00:56:26.420Z,1443488186.420 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T00:56:26.421Z,1443488186.421 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T00:56:26.422Z,1443488186.422 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T00:56:26.422Z,1443488186.422 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T00:56:26.424Z,1443488186.424 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T00:56:26.425Z,1443488186.425 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T00:56:26.428Z,1443488186.428 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T00:56:26.779Z,1443488186.779 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T00:56:26.780Z,1443488186.780 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T00:56:26.953Z,1443488186.953 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T00:56:26.955Z,1443488186.955 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T00:56:27.086Z,1443488187.086 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T00:56:27.087Z,1443488187.087 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T00:56:27.221Z,1443488187.221 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T00:56:27.222Z,1443488187.222 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T00:56:27.309Z,1443488187.309 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T00:56:27.507Z,1443488187.507 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T00:56:27.508Z,1443488187.508 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T00:56:27.595Z,1443488187.595 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T00:56:27.595Z,1443488187.595 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T00:56:27.878Z,1443488187.878 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T00:56:27.879Z,1443488187.879 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T00:56:28.239Z,1443488188.239 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T00:56:28.239Z,1443488188.239 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T00:56:28.556Z,1443488188.556 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T00:56:28.558Z,1443488188.558 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T00:56:29.093Z,1443488189.093 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T00:56:29.093Z,1443488189.093 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T00:56:29.302Z,1443488189.302 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T00:56:29.303Z,1443488189.303 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T00:56:29.408Z,1443488189.408 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T00:56:29.409Z,1443488189.409 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T00:56:29.876Z,1443488189.876 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T00:56:29.877Z,1443488189.877 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T00:56:30.030Z,1443488190.030 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T00:56:30.032Z,1443488190.032 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T00:56:30.033Z,1443488190.033 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T00:56:30.037Z,1443488190.037 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T00:56:30.107Z,1443488190.107 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T00:56:30.228Z,1443488190.228 [VerticalControl] Loaded
2015-09-29T00:56:30.229Z,1443488190.229 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T00:56:30.229Z,1443488190.229 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T00:56:30.302Z,1443488190.302 [HorizontalControl] Loaded
2015-09-29T00:56:30.302Z,1443488190.302 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T00:56:30.303Z,1443488190.303 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T00:56:30.309Z,1443488190.309 [SpeedControl] Loaded
2015-09-29T00:56:30.309Z,1443488190.309 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T00:56:30.310Z,1443488190.310 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T00:56:30.310Z,1443488190.310 [LoopControl] Loaded
2015-09-29T00:56:30.311Z,1443488190.311 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T00:56:30.311Z,1443488190.311 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T00:56:30.312Z,1443488190.312 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T00:56:30.457Z,1443488190.457 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T00:56:30.469Z,1443488190.469 [SBIT] Loaded
2015-09-29T00:56:30.469Z,1443488190.469 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T00:56:30.470Z,1443488190.470 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T00:56:30.499Z,1443488190.499 [IBIT] Loaded
2015-09-29T00:56:30.500Z,1443488190.500 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T00:56:30.502Z,1443488190.502 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T00:56:30.640Z,1443488190.640 [CBIT] Loaded
2015-09-29T00:56:30.641Z,1443488190.641 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T00:56:30.641Z,1443488190.641 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T00:56:30.642Z,1443488190.642 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T00:56:30.679Z,1443488190.679 [DepthRateCalculator] Loaded
2015-09-29T00:56:30.679Z,1443488190.679 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T00:56:30.685Z,1443488190.685 [PitchRateCalculator] Loaded
2015-09-29T00:56:30.685Z,1443488190.685 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T00:56:30.696Z,1443488190.696 [SpeedCalculator] Loaded
2015-09-29T00:56:30.697Z,1443488190.697 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T00:56:30.714Z,1443488190.714 [TempGradientCalculator] Loaded
2015-09-29T00:56:30.714Z,1443488190.714 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T00:56:30.731Z,1443488190.731 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T00:56:30.731Z,1443488190.731 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T00:56:30.737Z,1443488190.737 [YawRateCalculator] Loaded
2015-09-29T00:56:30.737Z,1443488190.737 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T00:56:30.738Z,1443488190.738 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T00:56:30.738Z,1443488190.738 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T00:56:30.849Z,1443488190.849 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T00:56:30.850Z,1443488190.850 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T00:56:30.850Z,1443488190.850 [StratificationFrontDetector] Loaded
2015-09-29T00:56:30.850Z,1443488190.850 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T00:56:30.851Z,1443488190.851 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T00:56:30.851Z,1443488190.851 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T00:56:31.116Z,1443488191.116 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T00:56:31.116Z,1443488191.116 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T00:56:31.236Z,1443488191.236 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T00:56:31.236Z,1443488191.236 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T00:56:31.292Z,1443488191.292 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T00:56:31.293Z,1443488191.293 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T00:56:31.310Z,1443488191.310 [NavChart] Loaded
2015-09-29T00:56:31.310Z,1443488191.310 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T00:56:31.316Z,1443488191.316 [UniversalFixResidualReporter] Loaded
2015-09-29T00:56:31.316Z,1443488191.316 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T00:56:31.316Z,1443488191.316 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T00:56:31.317Z,1443488191.317 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T00:56:31.325Z,1443488191.325 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T00:56:31.326Z,1443488191.326 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T00:56:31.609Z,1443488191.609 [CTD_NeilBrown] Loaded
2015-09-29T00:56:31.609Z,1443488191.609 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T00:56:31.611Z,1443488191.611 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T00:56:31.611Z,1443488191.611 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T00:56:31.624Z,1443488191.624 [ISUS] Loaded
2015-09-29T00:56:31.624Z,1443488191.624 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T00:56:31.639Z,1443488191.639 [PAR_Licor] Loaded
2015-09-29T00:56:31.639Z,1443488191.639 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T00:56:31.690Z,1443488191.690 [WetLabsBB2FL] Loaded
2015-09-29T00:56:31.690Z,1443488191.690 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T00:56:31.691Z,1443488191.691 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T00:56:31.692Z,1443488191.692 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T00:56:31.692Z,1443488191.692 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T00:56:31.693Z,1443488191.693 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T00:56:32.337Z,1443488192.337 [AHRS_sp3003D] Loaded
2015-09-29T00:56:32.337Z,1443488192.337 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T00:56:32.506Z,1443488192.506 [DataOverHttps] Loaded
2015-09-29T00:56:32.506Z,1443488192.506 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T00:56:32.520Z,1443488192.520 [Depth_Keller] Loaded
2015-09-29T00:56:32.520Z,1443488192.520 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T00:56:32.525Z,1443488192.525 [DropWeight] Loaded
2015-09-29T00:56:32.525Z,1443488192.525 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T00:56:32.665Z,1443488192.665 [DVL_micro] Loaded
2015-09-29T00:56:32.665Z,1443488192.665 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T00:56:32.761Z,1443488192.761 [NAL9602] Loaded
2015-09-29T00:56:32.761Z,1443488192.761 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T00:56:32.803Z,1443488192.803 [Onboard] Loaded
2015-09-29T00:56:32.804Z,1443488192.804 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T00:56:32.815Z,1443488192.815 [Radio_Surface] Loaded
2015-09-29T00:56:32.816Z,1443488192.816 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T00:56:32.817Z,1443488192.817 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T00:56:32.817Z,1443488192.817 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T00:56:32.959Z,1443488192.959 [DAT] Loaded
2015-09-29T00:56:32.959Z,1443488192.959 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T00:56:32.966Z,1443488192.966 [SCPI] Loaded
2015-09-29T00:56:32.966Z,1443488192.966 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T00:56:32.967Z,1443488192.967 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T00:56:32.968Z,1443488192.968 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T00:56:33.089Z,1443488193.089 [BuoyancyServo] Loaded
2015-09-29T00:56:33.089Z,1443488193.089 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T00:56:33.102Z,1443488193.102 [ElevatorServo] Loaded
2015-09-29T00:56:33.102Z,1443488193.102 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T00:56:33.114Z,1443488193.114 [MassServo] Loaded
2015-09-29T00:56:33.114Z,1443488193.114 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T00:56:33.126Z,1443488193.126 [RudderServo] Loaded
2015-09-29T00:56:33.126Z,1443488193.126 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T00:56:33.138Z,1443488193.138 [ThrusterServo] Loaded
2015-09-29T00:56:33.138Z,1443488193.138 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T00:56:33.138Z,1443488193.138 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T00:56:33.139Z,1443488193.139 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T00:56:33.320Z,1443488193.320 [InternalSim] Loaded
2015-09-29T00:56:33.321Z,1443488193.321 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T00:56:33.321Z,1443488193.321 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T00:56:33.322Z,1443488193.322 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T00:56:33.361Z,1443488193.361 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T00:56:33.365Z,1443488193.365 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T00:56:33.366Z,1443488193.366 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T00:56:33.373Z,1443488193.373 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T00:56:33.374Z,1443488193.374 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T00:56:33.374Z,1443488193.374 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T00:56:33.379Z,1443488193.379 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T00:56:33.379Z,1443488193.379 [Supervisor](DEBUG): Running supervisor.
2015-09-29T00:56:33.380Z,1443488193.380 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T00:56:33.383Z,1443488193.383 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T00:56:33.383Z,1443488193.383 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T00:56:33.384Z,1443488193.384 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T00:56:33.386Z,1443488193.386 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T00:56:33.387Z,1443488193.387 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T00:56:33.387Z,1443488193.387 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T00:56:33.387Z,1443488193.387 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T00:56:33.388Z,1443488193.388 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T00:56:33.390Z,1443488193.390 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T00:56:33.390Z,1443488193.390 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T00:56:33.391Z,1443488193.391 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T00:56:33.391Z,1443488193.391 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T00:56:33.392Z,1443488193.392 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T00:56:33.393Z,1443488193.393 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T00:56:33.393Z,1443488193.393 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T00:56:33.393Z,1443488193.393 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T00:56:33.393Z,1443488193.393 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T00:56:33.394Z,1443488193.394 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T00:56:33.394Z,1443488193.394 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T00:56:33.395Z,1443488193.395 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T00:56:33.395Z,1443488193.395 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T00:56:33.396Z,1443488193.396 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T00:56:33.396Z,1443488193.396 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T00:56:33.397Z,1443488193.397 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T00:56:33.397Z,1443488193.397 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T00:56:33.398Z,1443488193.398 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T00:56:33.398Z,1443488193.398 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T00:56:33.398Z,1443488193.398 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T00:56:33.399Z,1443488193.399 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T00:56:33.405Z,1443488193.405 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T00:56:33.417Z,1443488193.417 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T00:56:33.457Z,1443488193.457 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T00:56:33.470Z,1443488193.470 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T00:56:33.489Z,1443488193.489 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T00:56:33.582Z,1443488193.582 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T00:56:33.590Z,1443488193.590 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T00:56:33.592Z,1443488193.592 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T00:56:33.592Z,1443488193.592 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T00:56:33.592Z,1443488193.592 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T00:56:33.593Z,1443488193.593 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T00:56:33.593Z,1443488193.593 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T00:56:33.593Z,1443488193.593 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T00:56:33.593Z,1443488193.593 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T00:56:33.594Z,1443488193.594 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T00:56:33.656Z,1443488193.656 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T00:56:33.694Z,1443488193.694 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T00:56:33.712Z,1443488193.712 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T00:56:33.713Z,1443488193.713 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T00:56:33.764Z,1443488193.764 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T00:56:33.781Z,1443488193.781 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T00:56:33.811Z,1443488193.811 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T00:56:33.814Z,1443488193.814 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T00:56:33.836Z,1443488193.836 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T00:56:33.840Z,1443488193.840 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T00:56:33.862Z,1443488193.862 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T00:56:34.060Z,1443488194.060 [DVL_micro](INFO): Initializing
2015-09-29T00:56:34.224Z,1443488194.224 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:56:34.232Z,1443488194.232 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:56:34.340Z,1443488194.340 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T00:56:34.349Z,1443488194.349 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T00:56:34.368Z,1443488194.368 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T00:56:34.374Z,1443488194.374 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T00:56:34.388Z,1443488194.388 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T00:56:34.635Z,1443488194.635 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:56:34.644Z,1443488194.644 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:56:43.590Z,1443488203.590 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:43.888Z,1443488203.888 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:44.051Z,1443488204.051 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:44.452Z,1443488204.452 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003300
2015-09-29T00:56:44.455Z,1443488204.455 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:44.849Z,1443488204.849 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:45.250Z,1443488205.250 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:45.650Z,1443488205.650 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:46.049Z,1443488206.049 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:46.449Z,1443488206.449 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:46.849Z,1443488206.849 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:47.248Z,1443488207.248 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:47.649Z,1443488207.649 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:48.059Z,1443488208.059 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:48.460Z,1443488208.460 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:48.857Z,1443488208.857 [NAL9602](INFO): No messages in MT queue
2015-09-29T00:56:48.858Z,1443488208.858 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:49.258Z,1443488209.258 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:49.658Z,1443488209.658 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:50.058Z,1443488210.058 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:50.449Z,1443488210.449 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:50.858Z,1443488210.858 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:51.259Z,1443488211.259 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:51.659Z,1443488211.659 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:52.049Z,1443488212.049 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:52.458Z,1443488212.458 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:52.859Z,1443488212.859 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:53.258Z,1443488213.258 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:53.658Z,1443488213.658 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:54.053Z,1443488214.053 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:54.067Z,1443488214.067 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T00:56:54.449Z,1443488214.449 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:54.849Z,1443488214.849 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:55.249Z,1443488215.249 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:55.650Z,1443488215.650 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:56.049Z,1443488216.049 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:56.449Z,1443488216.449 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:56.849Z,1443488216.849 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:57.249Z,1443488217.249 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:57.649Z,1443488217.649 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:56:58.049Z,1443488218.049 [D