2015-09-29T00:48:32.328Z,1443487712.328 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T00:48:32.331Z,1443487712.331 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T00:48:32.331Z,1443487712.331 [SyncHandler](INFO): Protected caller Thread ID is 763
2015-09-29T00:48:32.332Z,1443487712.332 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T00:48:32.334Z,1443487712.334 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T00:48:32.334Z,1443487712.334 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T00:48:32.337Z,1443487712.337 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T00:48:32.349Z,1443487712.349 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T00:48:32.354Z,1443487712.354 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T00:48:32.354Z,1443487712.354 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 765
2015-09-29T00:48:32.355Z,1443487712.355 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T00:48:32.358Z,1443487712.358 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T00:48:32.358Z,1443487712.358 [logger ThreadHandler](INFO): Protected caller Thread ID is 766
2015-09-29T00:48:32.360Z,1443487712.360 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T00:48:32.361Z,1443487712.361 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T00:48:32.365Z,1443487712.365 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T00:48:32.767Z,1443487712.767 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T00:48:32.769Z,1443487712.769 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T00:48:32.961Z,1443487712.961 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T00:48:32.963Z,1443487712.963 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T00:48:33.110Z,1443487713.110 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T00:48:33.111Z,1443487713.111 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T00:48:33.259Z,1443487713.259 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T00:48:33.260Z,1443487713.260 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T00:48:33.358Z,1443487713.358 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T00:48:33.579Z,1443487713.579 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T00:48:33.579Z,1443487713.579 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T00:48:33.674Z,1443487713.674 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T00:48:33.675Z,1443487713.675 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T00:48:33.991Z,1443487713.991 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T00:48:33.992Z,1443487713.992 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T00:48:34.395Z,1443487714.395 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T00:48:34.396Z,1443487714.396 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T00:48:34.755Z,1443487714.755 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T00:48:34.757Z,1443487714.757 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T00:48:35.355Z,1443487715.355 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T00:48:35.356Z,1443487715.356 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T00:48:35.591Z,1443487715.591 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T00:48:35.592Z,1443487715.592 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T00:48:35.715Z,1443487715.715 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T00:48:35.715Z,1443487715.715 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T00:48:36.239Z,1443487716.239 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T00:48:36.240Z,1443487716.240 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T00:48:36.407Z,1443487716.407 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T00:48:36.409Z,1443487716.409 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T00:48:36.409Z,1443487716.409 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T00:48:36.414Z,1443487716.414 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T00:48:36.489Z,1443487716.489 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T00:48:36.624Z,1443487716.624 [VerticalControl] Loaded
2015-09-29T00:48:36.624Z,1443487716.624 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T00:48:36.625Z,1443487716.625 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T00:48:36.710Z,1443487716.710 [HorizontalControl] Loaded
2015-09-29T00:48:36.710Z,1443487716.710 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T00:48:36.711Z,1443487716.711 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T00:48:36.717Z,1443487716.717 [SpeedControl] Loaded
2015-09-29T00:48:36.717Z,1443487716.717 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T00:48:36.718Z,1443487716.718 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T00:48:36.718Z,1443487716.718 [LoopControl] Loaded
2015-09-29T00:48:36.719Z,1443487716.719 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T00:48:36.719Z,1443487716.719 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T00:48:36.720Z,1443487716.720 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T00:48:36.873Z,1443487716.873 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T00:48:36.889Z,1443487716.889 [SBIT] Loaded
2015-09-29T00:48:36.889Z,1443487716.889 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T00:48:36.890Z,1443487716.890 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T00:48:36.924Z,1443487716.924 [IBIT] Loaded
2015-09-29T00:48:36.924Z,1443487716.924 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T00:48:36.927Z,1443487716.927 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T00:48:37.082Z,1443487717.082 [CBIT] Loaded
2015-09-29T00:48:37.082Z,1443487717.082 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T00:48:37.083Z,1443487717.083 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T00:48:37.084Z,1443487717.084 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T00:48:37.125Z,1443487717.125 [DepthRateCalculator] Loaded
2015-09-29T00:48:37.125Z,1443487717.125 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T00:48:37.131Z,1443487717.131 [PitchRateCalculator] Loaded
2015-09-29T00:48:37.131Z,1443487717.131 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T00:48:37.142Z,1443487717.142 [SpeedCalculator] Loaded
2015-09-29T00:48:37.143Z,1443487717.143 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T00:48:37.164Z,1443487717.164 [TempGradientCalculator] Loaded
2015-09-29T00:48:37.164Z,1443487717.164 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T00:48:37.181Z,1443487717.181 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T00:48:37.182Z,1443487717.182 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T00:48:37.187Z,1443487717.187 [YawRateCalculator] Loaded
2015-09-29T00:48:37.187Z,1443487717.187 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T00:48:37.188Z,1443487717.188 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T00:48:37.189Z,1443487717.189 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T00:48:37.308Z,1443487717.308 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T00:48:37.308Z,1443487717.308 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T00:48:37.308Z,1443487717.308 [StratificationFrontDetector] Loaded
2015-09-29T00:48:37.309Z,1443487717.309 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T00:48:37.309Z,1443487717.309 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T00:48:37.310Z,1443487717.310 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T00:48:37.605Z,1443487717.605 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T00:48:37.606Z,1443487717.606 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T00:48:37.736Z,1443487717.736 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T00:48:37.737Z,1443487717.737 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T00:48:37.801Z,1443487717.801 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T00:48:37.802Z,1443487717.802 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T00:48:37.820Z,1443487717.820 [NavChart] Loaded
2015-09-29T00:48:37.820Z,1443487717.820 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T00:48:37.825Z,1443487717.825 [UniversalFixResidualReporter] Loaded
2015-09-29T00:48:37.825Z,1443487717.825 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T00:48:37.826Z,1443487717.826 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T00:48:37.827Z,1443487717.827 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T00:48:37.836Z,1443487717.836 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T00:48:37.836Z,1443487717.836 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T00:48:38.135Z,1443487718.135 [CTD_NeilBrown] Loaded
2015-09-29T00:48:38.135Z,1443487718.135 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T00:48:38.138Z,1443487718.138 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T00:48:38.138Z,1443487718.138 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T00:48:38.151Z,1443487718.151 [ISUS] Loaded
2015-09-29T00:48:38.151Z,1443487718.151 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T00:48:38.170Z,1443487718.170 [PAR_Licor] Loaded
2015-09-29T00:48:38.170Z,1443487718.170 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T00:48:38.226Z,1443487718.226 [WetLabsBB2FL] Loaded
2015-09-29T00:48:38.227Z,1443487718.227 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T00:48:38.230Z,1443487718.230 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T00:48:38.230Z,1443487718.230 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T00:48:38.231Z,1443487718.231 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T00:48:38.232Z,1443487718.232 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T00:48:38.962Z,1443487718.962 [AHRS_sp3003D] Loaded
2015-09-29T00:48:38.963Z,1443487718.963 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T00:48:39.153Z,1443487719.153 [DataOverHttps] Loaded
2015-09-29T00:48:39.154Z,1443487719.154 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T00:48:39.167Z,1443487719.167 [Depth_Keller] Loaded
2015-09-29T00:48:39.167Z,1443487719.167 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T00:48:39.172Z,1443487719.172 [DropWeight] Loaded
2015-09-29T00:48:39.173Z,1443487719.173 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T00:48:39.329Z,1443487719.329 [DVL_micro] Loaded
2015-09-29T00:48:39.330Z,1443487719.330 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T00:48:39.438Z,1443487719.438 [NAL9602] Loaded
2015-09-29T00:48:39.439Z,1443487719.439 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T00:48:39.485Z,1443487719.485 [Onboard] Loaded
2015-09-29T00:48:39.486Z,1443487719.486 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T00:48:39.497Z,1443487719.497 [Radio_Surface] Loaded
2015-09-29T00:48:39.498Z,1443487719.498 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T00:48:39.502Z,1443487719.502 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T00:48:39.502Z,1443487719.502 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 814
2015-09-29T00:48:39.662Z,1443487719.662 [DAT] Loaded
2015-09-29T00:48:39.663Z,1443487719.663 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T00:48:39.669Z,1443487719.669 [SCPI] Loaded
2015-09-29T00:48:39.670Z,1443487719.670 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T00:48:39.670Z,1443487719.670 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T00:48:39.671Z,1443487719.671 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T00:48:39.806Z,1443487719.806 [BuoyancyServo] Loaded
2015-09-29T00:48:39.806Z,1443487719.806 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T00:48:39.819Z,1443487719.819 [ElevatorServo] Loaded
2015-09-29T00:48:39.819Z,1443487719.819 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T00:48:39.835Z,1443487719.835 [MassServo] Loaded
2015-09-29T00:48:39.835Z,1443487719.835 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T00:48:39.847Z,1443487719.847 [RudderServo] Loaded
2015-09-29T00:48:39.848Z,1443487719.848 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T00:48:39.859Z,1443487719.859 [ThrusterServo] Loaded
2015-09-29T00:48:39.859Z,1443487719.859 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T00:48:39.860Z,1443487719.860 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T00:48:39.860Z,1443487719.860 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T00:48:40.064Z,1443487720.064 [InternalSim] Loaded
2015-09-29T00:48:40.064Z,1443487720.064 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T00:48:40.065Z,1443487720.065 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T00:48:40.065Z,1443487720.065 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T00:48:40.108Z,1443487720.108 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T00:48:40.112Z,1443487720.112 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T00:48:40.113Z,1443487720.113 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T00:48:40.120Z,1443487720.120 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T00:48:40.122Z,1443487720.122 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T00:48:40.122Z,1443487720.122 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 815
2015-09-29T00:48:40.127Z,1443487720.127 [Supervisor](INFO): Main Thread ID is 762
2015-09-29T00:48:40.127Z,1443487720.127 [Supervisor](DEBUG): Running supervisor.
2015-09-29T00:48:40.128Z,1443487720.128 [CommandLine ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T00:48:40.134Z,1443487720.134 [controlThread ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T00:48:40.135Z,1443487720.135 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T00:48:40.136Z,1443487720.136 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T00:48:40.138Z,1443487720.138 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T00:48:40.138Z,1443487720.138 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T00:48:40.139Z,1443487720.139 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T00:48:40.139Z,1443487720.139 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T00:48:40.140Z,1443487720.140 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T00:48:40.141Z,1443487720.141 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T00:48:40.142Z,1443487720.142 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T00:48:40.143Z,1443487720.143 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T00:48:40.143Z,1443487720.143 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T00:48:40.144Z,1443487720.144 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T00:48:40.144Z,1443487720.144 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T00:48:40.144Z,1443487720.144 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T00:48:40.145Z,1443487720.145 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T00:48:40.145Z,1443487720.145 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T00:48:40.145Z,1443487720.145 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T00:48:40.145Z,1443487720.145 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T00:48:40.146Z,1443487720.146 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T00:48:40.147Z,1443487720.147 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T00:48:40.147Z,1443487720.147 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T00:48:40.148Z,1443487720.148 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T00:48:40.148Z,1443487720.148 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T00:48:40.149Z,1443487720.149 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T00:48:40.149Z,1443487720.149 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T00:48:40.149Z,1443487720.149 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T00:48:40.150Z,1443487720.150 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T00:48:40.150Z,1443487720.150 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T00:48:40.155Z,1443487720.155 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T00:48:40.186Z,1443487720.186 [logger ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T00:48:40.290Z,1443487720.290 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T00:48:40.292Z,1443487720.292 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T00:48:40.302Z,1443487720.302 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 821
2015-09-29T00:48:40.364Z,1443487720.364 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 822
2015-09-29T00:48:40.375Z,1443487720.375 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T00:48:40.411Z,1443487720.411 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T00:48:40.416Z,1443487720.416 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T00:48:40.418Z,1443487720.418 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T00:48:40.419Z,1443487720.419 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T00:48:40.419Z,1443487720.419 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T00:48:40.419Z,1443487720.419 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T00:48:40.419Z,1443487720.419 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T00:48:40.420Z,1443487720.420 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T00:48:40.420Z,1443487720.420 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T00:48:40.420Z,1443487720.420 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T00:48:40.431Z,1443487720.431 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T00:48:40.432Z,1443487720.432 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T00:48:40.513Z,1443487720.513 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T00:48:40.534Z,1443487720.534 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T00:48:40.556Z,1443487720.556 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T00:48:40.587Z,1443487720.587 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T00:48:40.593Z,1443487720.593 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T00:48:40.610Z,1443487720.610 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T00:48:40.635Z,1443487720.635 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T00:48:40.835Z,1443487720.835 [DVL_micro](INFO): Initializing
2015-09-29T00:48:40.998Z,1443487720.998 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:48:41.010Z,1443487721.010 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:48:41.111Z,1443487721.111 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T00:48:41.138Z,1443487721.138 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T00:48:41.150Z,1443487721.150 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T00:48:41.162Z,1443487721.162 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T00:48:41.178Z,1443487721.178 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T00:48:41.453Z,1443487721.453 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:48:41.454Z,1443487721.454 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:48:50.562Z,1443487730.562 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:50.897Z,1443487730.897 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:51.037Z,1443487731.037 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:51.437Z,1443487731.437 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T00:48:51.440Z,1443487731.440 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:51.836Z,1443487731.836 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:52.235Z,1443487732.235 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:52.639Z,1443487732.639 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:53.035Z,1443487733.035 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:53.435Z,1443487733.435 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:53.834Z,1443487733.834 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:54.254Z,1443487734.254 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:54.634Z,1443487734.634 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:55.034Z,1443487735.034 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:55.435Z,1443487735.435 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:55.838Z,1443487735.838 [NAL9602](INFO): No messages in MT queue
2015-09-29T00:48:55.839Z,1443487735.839 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:56.235Z,1443487736.235 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:56.634Z,1443487736.634 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:57.035Z,1443487737.035 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:57.436Z,1443487737.436 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:57.834Z,1443487737.834 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:58.239Z,1443487738.239 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:58.636Z,1443487738.636 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:59.039Z,1443487739.039 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:59.434Z,1443487739.434 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:48:59.835Z,1443487739.835 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:49:00.239Z,1443487740.239 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:49:00.638Z,1443487740.638 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:49:00.653Z,1443487740.653 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T00:49:01.034Z,1443487741.034 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:49:01.439Z,1443487741.439 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:49:01.835Z,1443487741.835 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:49:02.235Z,1443487742.235 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:49:02.639Z,1443487742.639 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:49:03.036Z,1443487743.036 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:49:03.435Z,1443487743.435 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:49:03.835Z,1443487743.835 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:49:04.239Z,1443487744.239 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:49:04.635Z,1443487744.635 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:49:05.035Z,1443487745.035 [D