2015-09-29T00:40:41.543Z,1443487241.543 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T00:40:41.546Z,1443487241.546 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T00:40:41.547Z,1443487241.547 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T00:40:41.547Z,1443487241.547 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T00:40:41.549Z,1443487241.549 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T00:40:41.549Z,1443487241.549 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T00:40:41.552Z,1443487241.552 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T00:40:41.565Z,1443487241.565 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T00:40:41.569Z,1443487241.569 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T00:40:41.569Z,1443487241.569 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T00:40:41.570Z,1443487241.570 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T00:40:41.573Z,1443487241.573 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T00:40:41.573Z,1443487241.573 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T00:40:41.575Z,1443487241.575 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T00:40:41.576Z,1443487241.576 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T00:40:41.580Z,1443487241.580 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T00:40:42.002Z,1443487242.002 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T00:40:42.004Z,1443487242.004 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T00:40:42.209Z,1443487242.209 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T00:40:42.211Z,1443487242.211 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T00:40:42.361Z,1443487242.361 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T00:40:42.362Z,1443487242.362 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T00:40:42.513Z,1443487242.513 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T00:40:42.514Z,1443487242.514 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T00:40:42.614Z,1443487242.614 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T00:40:42.842Z,1443487242.842 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T00:40:42.842Z,1443487242.842 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T00:40:42.941Z,1443487242.941 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T00:40:42.942Z,1443487242.942 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T00:40:43.272Z,1443487243.272 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T00:40:43.273Z,1443487243.273 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T00:40:43.695Z,1443487243.695 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T00:40:43.696Z,1443487243.696 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T00:40:44.068Z,1443487244.068 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T00:40:44.070Z,1443487244.070 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T00:40:44.700Z,1443487244.700 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T00:40:44.701Z,1443487244.701 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T00:40:44.953Z,1443487244.953 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T00:40:44.954Z,1443487244.954 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T00:40:45.074Z,1443487245.074 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T00:40:45.074Z,1443487245.074 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T00:40:45.662Z,1443487245.662 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T00:40:45.663Z,1443487245.663 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T00:40:45.793Z,1443487245.793 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T00:40:45.795Z,1443487245.795 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T00:40:45.796Z,1443487245.796 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T00:40:45.800Z,1443487245.800 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T00:40:45.878Z,1443487245.878 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T00:40:46.022Z,1443487246.022 [VerticalControl] Loaded
2015-09-29T00:40:46.022Z,1443487246.022 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T00:40:46.023Z,1443487246.023 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T00:40:46.106Z,1443487246.106 [HorizontalControl] Loaded
2015-09-29T00:40:46.107Z,1443487246.107 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T00:40:46.107Z,1443487246.107 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T00:40:46.114Z,1443487246.114 [SpeedControl] Loaded
2015-09-29T00:40:46.114Z,1443487246.114 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T00:40:46.115Z,1443487246.115 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T00:40:46.115Z,1443487246.115 [LoopControl] Loaded
2015-09-29T00:40:46.116Z,1443487246.116 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T00:40:46.116Z,1443487246.116 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T00:40:46.117Z,1443487246.117 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T00:40:46.280Z,1443487246.280 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T00:40:46.293Z,1443487246.293 [SBIT] Loaded
2015-09-29T00:40:46.293Z,1443487246.293 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T00:40:46.294Z,1443487246.294 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T00:40:46.329Z,1443487246.329 [IBIT] Loaded
2015-09-29T00:40:46.329Z,1443487246.329 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T00:40:46.331Z,1443487246.331 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T00:40:46.490Z,1443487246.490 [CBIT] Loaded
2015-09-29T00:40:46.491Z,1443487246.491 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T00:40:46.491Z,1443487246.491 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T00:40:46.492Z,1443487246.492 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T00:40:46.534Z,1443487246.534 [DepthRateCalculator] Loaded
2015-09-29T00:40:46.534Z,1443487246.534 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T00:40:46.540Z,1443487246.540 [PitchRateCalculator] Loaded
2015-09-29T00:40:46.540Z,1443487246.540 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T00:40:46.552Z,1443487246.552 [SpeedCalculator] Loaded
2015-09-29T00:40:46.552Z,1443487246.552 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T00:40:46.574Z,1443487246.574 [TempGradientCalculator] Loaded
2015-09-29T00:40:46.575Z,1443487246.575 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T00:40:46.593Z,1443487246.593 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T00:40:46.593Z,1443487246.593 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T00:40:46.598Z,1443487246.598 [YawRateCalculator] Loaded
2015-09-29T00:40:46.599Z,1443487246.599 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T00:40:46.599Z,1443487246.599 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T00:40:46.600Z,1443487246.600 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T00:40:46.724Z,1443487246.724 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T00:40:46.724Z,1443487246.724 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T00:40:46.724Z,1443487246.724 [StratificationFrontDetector] Loaded
2015-09-29T00:40:46.729Z,1443487246.729 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T00:40:46.729Z,1443487246.729 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T00:40:46.730Z,1443487246.730 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T00:40:47.029Z,1443487247.029 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T00:40:47.030Z,1443487247.030 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T00:40:47.162Z,1443487247.162 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T00:40:47.162Z,1443487247.162 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T00:40:47.229Z,1443487247.229 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T00:40:47.229Z,1443487247.229 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T00:40:47.247Z,1443487247.247 [NavChart] Loaded
2015-09-29T00:40:47.248Z,1443487247.248 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T00:40:47.253Z,1443487247.253 [UniversalFixResidualReporter] Loaded
2015-09-29T00:40:47.254Z,1443487247.254 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T00:40:47.254Z,1443487247.254 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T00:40:47.255Z,1443487247.255 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T00:40:47.263Z,1443487247.263 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T00:40:47.264Z,1443487247.264 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T00:40:47.572Z,1443487247.572 [CTD_NeilBrown] Loaded
2015-09-29T00:40:47.577Z,1443487247.577 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T00:40:47.581Z,1443487247.581 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T00:40:47.581Z,1443487247.581 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T00:40:47.594Z,1443487247.594 [ISUS] Loaded
2015-09-29T00:40:47.595Z,1443487247.595 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T00:40:47.614Z,1443487247.614 [PAR_Licor] Loaded
2015-09-29T00:40:47.614Z,1443487247.614 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T00:40:47.672Z,1443487247.672 [WetLabsBB2FL] Loaded
2015-09-29T00:40:47.672Z,1443487247.672 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T00:40:47.677Z,1443487247.677 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T00:40:47.677Z,1443487247.677 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T00:40:47.678Z,1443487247.678 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T00:40:47.679Z,1443487247.679 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T00:40:48.415Z,1443487248.415 [AHRS_sp3003D] Loaded
2015-09-29T00:40:48.415Z,1443487248.415 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T00:40:48.610Z,1443487248.610 [DataOverHttps] Loaded
2015-09-29T00:40:48.610Z,1443487248.610 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T00:40:48.624Z,1443487248.624 [Depth_Keller] Loaded
2015-09-29T00:40:48.629Z,1443487248.629 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T00:40:48.634Z,1443487248.634 [DropWeight] Loaded
2015-09-29T00:40:48.634Z,1443487248.634 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T00:40:48.790Z,1443487248.790 [DVL_micro] Loaded
2015-09-29T00:40:48.791Z,1443487248.791 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T00:40:48.902Z,1443487248.902 [NAL9602] Loaded
2015-09-29T00:40:48.902Z,1443487248.902 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T00:40:48.955Z,1443487248.955 [Onboard] Loaded
2015-09-29T00:40:48.956Z,1443487248.956 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T00:40:48.968Z,1443487248.968 [Radio_Surface] Loaded
2015-09-29T00:40:48.968Z,1443487248.968 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T00:40:48.973Z,1443487248.973 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T00:40:48.973Z,1443487248.973 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T00:40:49.138Z,1443487249.138 [DAT] Loaded
2015-09-29T00:40:49.138Z,1443487249.138 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T00:40:49.145Z,1443487249.145 [SCPI] Loaded
2015-09-29T00:40:49.145Z,1443487249.145 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T00:40:49.146Z,1443487249.146 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T00:40:49.147Z,1443487249.147 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T00:40:49.283Z,1443487249.283 [BuoyancyServo] Loaded
2015-09-29T00:40:49.283Z,1443487249.283 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T00:40:49.300Z,1443487249.300 [ElevatorServo] Loaded
2015-09-29T00:40:49.301Z,1443487249.301 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T00:40:49.317Z,1443487249.317 [MassServo] Loaded
2015-09-29T00:40:49.317Z,1443487249.317 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T00:40:49.330Z,1443487249.330 [RudderServo] Loaded
2015-09-29T00:40:49.330Z,1443487249.330 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T00:40:49.342Z,1443487249.342 [ThrusterServo] Loaded
2015-09-29T00:40:49.342Z,1443487249.342 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T00:40:49.342Z,1443487249.342 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T00:40:49.343Z,1443487249.343 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T00:40:49.551Z,1443487249.551 [InternalSim] Loaded
2015-09-29T00:40:49.551Z,1443487249.551 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T00:40:49.552Z,1443487249.552 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T00:40:49.552Z,1443487249.552 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T00:40:49.595Z,1443487249.595 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T00:40:49.599Z,1443487249.599 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T00:40:49.600Z,1443487249.600 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T00:40:49.607Z,1443487249.607 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T00:40:49.609Z,1443487249.609 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T00:40:49.609Z,1443487249.609 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T00:40:49.614Z,1443487249.614 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T00:40:49.614Z,1443487249.614 [Supervisor](DEBUG): Running supervisor.
2015-09-29T00:40:49.615Z,1443487249.615 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T00:40:49.621Z,1443487249.621 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T00:40:49.622Z,1443487249.622 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T00:40:49.622Z,1443487249.622 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T00:40:49.624Z,1443487249.624 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T00:40:49.625Z,1443487249.625 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T00:40:49.626Z,1443487249.626 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T00:40:49.626Z,1443487249.626 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T00:40:49.627Z,1443487249.627 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T00:40:49.628Z,1443487249.628 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T00:40:49.628Z,1443487249.628 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T00:40:49.629Z,1443487249.629 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T00:40:49.630Z,1443487249.630 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T00:40:49.631Z,1443487249.631 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T00:40:49.631Z,1443487249.631 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T00:40:49.631Z,1443487249.631 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T00:40:49.631Z,1443487249.631 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T00:40:49.632Z,1443487249.632 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T00:40:49.632Z,1443487249.632 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T00:40:49.632Z,1443487249.632 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T00:40:49.633Z,1443487249.633 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T00:40:49.633Z,1443487249.633 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T00:40:49.634Z,1443487249.634 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T00:40:49.635Z,1443487249.635 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T00:40:49.635Z,1443487249.635 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T00:40:49.635Z,1443487249.635 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T00:40:49.636Z,1443487249.636 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T00:40:49.636Z,1443487249.636 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T00:40:49.637Z,1443487249.637 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T00:40:49.637Z,1443487249.637 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T00:40:49.642Z,1443487249.642 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T00:40:49.677Z,1443487249.677 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T00:40:49.765Z,1443487249.765 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T00:40:49.774Z,1443487249.774 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T00:40:49.816Z,1443487249.816 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T00:40:49.833Z,1443487249.833 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T00:40:49.844Z,1443487249.844 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T00:40:49.862Z,1443487249.862 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T00:40:49.865Z,1443487249.865 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T00:40:49.865Z,1443487249.865 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T00:40:49.865Z,1443487249.865 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T00:40:49.865Z,1443487249.865 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T00:40:49.866Z,1443487249.866 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T00:40:49.866Z,1443487249.866 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T00:40:49.866Z,1443487249.866 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T00:40:49.866Z,1443487249.866 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T00:40:49.912Z,1443487249.912 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T00:40:49.931Z,1443487249.931 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T00:40:49.932Z,1443487249.932 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T00:40:50.037Z,1443487250.037 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T00:40:50.038Z,1443487250.038 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T00:40:50.114Z,1443487250.114 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T00:40:50.117Z,1443487250.117 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T00:40:50.130Z,1443487250.130 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T00:40:50.137Z,1443487250.137 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T00:40:50.143Z,1443487250.143 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T00:40:50.353Z,1443487250.353 [DVL_micro](INFO): Initializing
2015-09-29T00:40:50.506Z,1443487250.506 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:40:50.533Z,1443487250.533 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:40:50.646Z,1443487250.646 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T00:40:50.652Z,1443487250.652 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T00:40:50.678Z,1443487250.678 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T00:40:50.693Z,1443487250.693 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T00:40:50.705Z,1443487250.705 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T00:40:50.971Z,1443487250.971 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:40:50.972Z,1443487250.972 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:40:59.978Z,1443487259.978 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:00.372Z,1443487260.372 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:00.484Z,1443487260.484 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:00.851Z,1443487260.851 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T00:41:00.855Z,1443487260.855 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:01.250Z,1443487261.250 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:01.651Z,1443487261.651 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:02.050Z,1443487262.050 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:02.450Z,1443487262.450 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:02.850Z,1443487262.850 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:03.250Z,1443487263.250 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:03.649Z,1443487263.649 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:04.050Z,1443487264.050 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:04.459Z,1443487264.459 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:04.860Z,1443487264.860 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:05.258Z,1443487265.258 [NAL9602](INFO): No messages in MT queue
2015-09-29T00:41:05.259Z,1443487265.259 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:05.661Z,1443487265.661 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:06.059Z,1443487266.059 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:06.458Z,1443487266.458 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:06.859Z,1443487266.859 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:07.259Z,1443487267.259 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:07.660Z,1443487267.660 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:08.059Z,1443487268.059 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:08.460Z,1443487268.460 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:08.861Z,1443487268.861 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:09.259Z,1443487269.259 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:09.650Z,1443487269.650 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:10.060Z,1443487270.060 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:10.075Z,1443487270.075 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T00:41:10.460Z,1443487270.460 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:10.849Z,1443487270.849 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:11.250Z,1443487271.250 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:11.650Z,1443487271.650 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:12.050Z,1443487272.050 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:12.450Z,1443487272.450 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:12.850Z,1443487272.850 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:13.250Z,1443487273.250 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:13.651Z,1443487273.651 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:14.050Z,1443487274.050 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:41:14.450Z,1443487274.450 [D