2015-09-29T00:24:48.509Z,1443486288.509 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T00:24:48.513Z,1443486288.513 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T00:24:48.513Z,1443486288.513 [SyncHandler](INFO): Protected caller Thread ID is 762
2015-09-29T00:24:48.514Z,1443486288.514 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T00:24:48.517Z,1443486288.517 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T00:24:48.517Z,1443486288.517 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T00:24:48.520Z,1443486288.520 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T00:24:48.532Z,1443486288.532 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T00:24:48.537Z,1443486288.537 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T00:24:48.537Z,1443486288.537 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T00:24:48.538Z,1443486288.538 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T00:24:48.541Z,1443486288.541 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T00:24:48.541Z,1443486288.541 [logger ThreadHandler](INFO): Protected caller Thread ID is 765
2015-09-29T00:24:48.543Z,1443486288.543 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T00:24:48.543Z,1443486288.543 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T00:24:48.547Z,1443486288.547 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T00:24:48.946Z,1443486288.946 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T00:24:48.948Z,1443486288.948 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T00:24:49.140Z,1443486289.140 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T00:24:49.142Z,1443486289.142 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T00:24:49.290Z,1443486289.290 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T00:24:49.291Z,1443486289.291 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T00:24:49.441Z,1443486289.441 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T00:24:49.442Z,1443486289.442 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T00:24:49.538Z,1443486289.538 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T00:24:49.762Z,1443486289.762 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T00:24:49.763Z,1443486289.763 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T00:24:49.860Z,1443486289.860 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T00:24:49.861Z,1443486289.861 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T00:24:50.178Z,1443486290.178 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T00:24:50.178Z,1443486290.178 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T00:24:50.582Z,1443486290.582 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T00:24:50.582Z,1443486290.582 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T00:24:50.942Z,1443486290.942 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T00:24:50.944Z,1443486290.944 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T00:24:51.546Z,1443486291.546 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T00:24:51.547Z,1443486291.547 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T00:24:51.784Z,1443486291.784 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T00:24:51.785Z,1443486291.785 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T00:24:51.901Z,1443486291.901 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T00:24:51.902Z,1443486291.902 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T00:24:52.434Z,1443486292.434 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T00:24:52.435Z,1443486292.435 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T00:24:52.562Z,1443486292.562 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T00:24:52.564Z,1443486292.564 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T00:24:52.564Z,1443486292.564 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T00:24:52.569Z,1443486292.569 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T00:24:52.643Z,1443486292.643 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T00:24:52.777Z,1443486292.777 [VerticalControl] Loaded
2015-09-29T00:24:52.777Z,1443486292.777 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T00:24:52.778Z,1443486292.778 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T00:24:52.862Z,1443486292.862 [HorizontalControl] Loaded
2015-09-29T00:24:52.862Z,1443486292.862 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T00:24:52.863Z,1443486292.863 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T00:24:52.869Z,1443486292.869 [SpeedControl] Loaded
2015-09-29T00:24:52.869Z,1443486292.869 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T00:24:52.870Z,1443486292.870 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T00:24:52.870Z,1443486292.870 [LoopControl] Loaded
2015-09-29T00:24:52.871Z,1443486292.871 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T00:24:52.871Z,1443486292.871 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T00:24:52.872Z,1443486292.872 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T00:24:53.031Z,1443486293.031 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T00:24:53.043Z,1443486293.043 [SBIT] Loaded
2015-09-29T00:24:53.044Z,1443486293.044 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T00:24:53.044Z,1443486293.044 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T00:24:53.078Z,1443486293.078 [IBIT] Loaded
2015-09-29T00:24:53.078Z,1443486293.078 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T00:24:53.080Z,1443486293.080 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T00:24:53.235Z,1443486293.235 [CBIT] Loaded
2015-09-29T00:24:53.235Z,1443486293.235 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T00:24:53.235Z,1443486293.235 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T00:24:53.236Z,1443486293.236 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T00:24:53.277Z,1443486293.277 [DepthRateCalculator] Loaded
2015-09-29T00:24:53.277Z,1443486293.277 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T00:24:53.283Z,1443486293.283 [PitchRateCalculator] Loaded
2015-09-29T00:24:53.283Z,1443486293.283 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T00:24:53.295Z,1443486293.295 [SpeedCalculator] Loaded
2015-09-29T00:24:53.295Z,1443486293.295 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T00:24:53.316Z,1443486293.316 [TempGradientCalculator] Loaded
2015-09-29T00:24:53.317Z,1443486293.317 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T00:24:53.334Z,1443486293.334 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T00:24:53.334Z,1443486293.334 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T00:24:53.339Z,1443486293.339 [YawRateCalculator] Loaded
2015-09-29T00:24:53.340Z,1443486293.340 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T00:24:53.340Z,1443486293.340 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T00:24:53.341Z,1443486293.341 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T00:24:53.461Z,1443486293.461 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T00:24:53.461Z,1443486293.461 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T00:24:53.462Z,1443486293.462 [StratificationFrontDetector] Loaded
2015-09-29T00:24:53.462Z,1443486293.462 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T00:24:53.462Z,1443486293.462 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T00:24:53.463Z,1443486293.463 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T00:24:53.756Z,1443486293.756 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T00:24:53.757Z,1443486293.757 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T00:24:53.889Z,1443486293.889 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T00:24:53.890Z,1443486293.890 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T00:24:53.950Z,1443486293.950 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T00:24:53.950Z,1443486293.950 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T00:24:53.968Z,1443486293.968 [NavChart] Loaded
2015-09-29T00:24:53.968Z,1443486293.968 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T00:24:53.977Z,1443486293.977 [UniversalFixResidualReporter] Loaded
2015-09-29T00:24:53.978Z,1443486293.978 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T00:24:53.978Z,1443486293.978 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T00:24:53.979Z,1443486293.979 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T00:24:53.987Z,1443486293.987 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T00:24:53.988Z,1443486293.988 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T00:24:54.289Z,1443486294.289 [CTD_NeilBrown] Loaded
2015-09-29T00:24:54.290Z,1443486294.290 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T00:24:54.293Z,1443486294.293 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T00:24:54.293Z,1443486294.293 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T00:24:54.306Z,1443486294.306 [ISUS] Loaded
2015-09-29T00:24:54.306Z,1443486294.306 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T00:24:54.321Z,1443486294.321 [PAR_Licor] Loaded
2015-09-29T00:24:54.321Z,1443486294.321 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T00:24:54.381Z,1443486294.381 [WetLabsBB2FL] Loaded
2015-09-29T00:24:54.381Z,1443486294.381 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T00:24:54.385Z,1443486294.385 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T00:24:54.385Z,1443486294.385 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T00:24:54.385Z,1443486294.385 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T00:24:54.386Z,1443486294.386 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T00:24:55.116Z,1443486295.116 [AHRS_sp3003D] Loaded
2015-09-29T00:24:55.116Z,1443486295.116 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T00:24:55.316Z,1443486295.316 [DataOverHttps] Loaded
2015-09-29T00:24:55.316Z,1443486295.316 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T00:24:55.334Z,1443486295.334 [Depth_Keller] Loaded
2015-09-29T00:24:55.334Z,1443486295.334 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T00:24:55.339Z,1443486295.339 [DropWeight] Loaded
2015-09-29T00:24:55.339Z,1443486295.339 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T00:24:55.491Z,1443486295.491 [DVL_micro] Loaded
2015-09-29T00:24:55.491Z,1443486295.491 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T00:24:55.600Z,1443486295.600 [NAL9602] Loaded
2015-09-29T00:24:55.601Z,1443486295.601 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T00:24:55.648Z,1443486295.648 [Onboard] Loaded
2015-09-29T00:24:55.648Z,1443486295.648 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T00:24:55.660Z,1443486295.660 [Radio_Surface] Loaded
2015-09-29T00:24:55.660Z,1443486295.660 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T00:24:55.669Z,1443486295.669 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T00:24:55.669Z,1443486295.669 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T00:24:55.828Z,1443486295.828 [DAT] Loaded
2015-09-29T00:24:55.829Z,1443486295.829 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T00:24:55.835Z,1443486295.835 [SCPI] Loaded
2015-09-29T00:24:55.836Z,1443486295.836 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T00:24:55.836Z,1443486295.836 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T00:24:55.837Z,1443486295.837 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T00:24:55.966Z,1443486295.966 [BuoyancyServo] Loaded
2015-09-29T00:24:55.967Z,1443486295.967 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T00:24:55.984Z,1443486295.984 [ElevatorServo] Loaded
2015-09-29T00:24:55.984Z,1443486295.984 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T00:24:55.996Z,1443486295.996 [MassServo] Loaded
2015-09-29T00:24:55.996Z,1443486295.996 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T00:24:56.008Z,1443486296.008 [RudderServo] Loaded
2015-09-29T00:24:56.008Z,1443486296.008 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T00:24:56.024Z,1443486296.024 [ThrusterServo] Loaded
2015-09-29T00:24:56.024Z,1443486296.024 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T00:24:56.024Z,1443486296.024 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T00:24:56.025Z,1443486296.025 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T00:24:56.223Z,1443486296.223 [InternalSim] Loaded
2015-09-29T00:24:56.224Z,1443486296.224 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T00:24:56.224Z,1443486296.224 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T00:24:56.225Z,1443486296.225 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T00:24:56.268Z,1443486296.268 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T00:24:56.272Z,1443486296.272 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T00:24:56.273Z,1443486296.273 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T00:24:56.280Z,1443486296.280 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T00:24:56.285Z,1443486296.285 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T00:24:56.285Z,1443486296.285 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 814
2015-09-29T00:24:56.290Z,1443486296.290 [Supervisor](INFO): Main Thread ID is 761
2015-09-29T00:24:56.290Z,1443486296.290 [Supervisor](DEBUG): Running supervisor.
2015-09-29T00:24:56.291Z,1443486296.291 [CommandLine ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T00:24:56.297Z,1443486296.297 [controlThread ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T00:24:56.298Z,1443486296.298 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T00:24:56.298Z,1443486296.298 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T00:24:56.300Z,1443486296.300 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T00:24:56.301Z,1443486296.301 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T00:24:56.302Z,1443486296.302 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T00:24:56.302Z,1443486296.302 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T00:24:56.303Z,1443486296.303 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T00:24:56.304Z,1443486296.304 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T00:24:56.304Z,1443486296.304 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T00:24:56.305Z,1443486296.305 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T00:24:56.306Z,1443486296.306 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T00:24:56.307Z,1443486296.307 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T00:24:56.307Z,1443486296.307 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T00:24:56.307Z,1443486296.307 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T00:24:56.307Z,1443486296.307 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T00:24:56.308Z,1443486296.308 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T00:24:56.308Z,1443486296.308 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T00:24:56.308Z,1443486296.308 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T00:24:56.309Z,1443486296.309 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T00:24:56.309Z,1443486296.309 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T00:24:56.310Z,1443486296.310 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T00:24:56.311Z,1443486296.311 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T00:24:56.311Z,1443486296.311 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T00:24:56.311Z,1443486296.311 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T00:24:56.312Z,1443486296.312 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T00:24:56.312Z,1443486296.312 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T00:24:56.313Z,1443486296.313 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T00:24:56.313Z,1443486296.313 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T00:24:56.318Z,1443486296.318 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T00:24:56.353Z,1443486296.353 [logger ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T00:24:56.468Z,1443486296.468 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T00:24:56.477Z,1443486296.477 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T00:24:56.488Z,1443486296.488 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T00:24:56.513Z,1443486296.513 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T00:24:56.520Z,1443486296.520 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 821
2015-09-29T00:24:56.618Z,1443486296.618 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T00:24:56.621Z,1443486296.621 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T00:24:56.621Z,1443486296.621 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T00:24:56.621Z,1443486296.621 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T00:24:56.621Z,1443486296.621 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T00:24:56.622Z,1443486296.622 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T00:24:56.622Z,1443486296.622 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T00:24:56.622Z,1443486296.622 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T00:24:56.622Z,1443486296.622 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T00:24:56.642Z,1443486296.642 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T00:24:56.652Z,1443486296.652 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T00:24:56.666Z,1443486296.666 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T00:24:56.728Z,1443486296.728 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T00:24:56.741Z,1443486296.741 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T00:24:56.759Z,1443486296.759 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T00:24:56.779Z,1443486296.779 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T00:24:56.801Z,1443486296.801 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T00:24:56.804Z,1443486296.804 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T00:24:56.818Z,1443486296.818 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T00:24:57.080Z,1443486297.080 [DVL_micro](INFO): Initializing
2015-09-29T00:24:57.233Z,1443486297.233 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:24:57.245Z,1443486297.245 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:24:57.342Z,1443486297.342 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T00:24:57.361Z,1443486297.361 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T00:24:57.366Z,1443486297.366 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T00:24:57.382Z,1443486297.382 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T00:24:57.389Z,1443486297.389 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T00:24:57.655Z,1443486297.655 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:24:57.656Z,1443486297.656 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T00:25:06.692Z,1443486306.692 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:07.040Z,1443486307.040 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:07.171Z,1443486307.171 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:07.572Z,1443486307.572 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T00:25:07.575Z,1443486307.575 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:07.970Z,1443486307.970 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:08.370Z,1443486308.370 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:08.770Z,1443486308.770 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:09.190Z,1443486309.190 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:09.570Z,1443486309.570 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:09.971Z,1443486309.971 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:10.369Z,1443486310.369 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:10.770Z,1443486310.770 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:11.169Z,1443486311.169 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:11.569Z,1443486311.569 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:11.969Z,1443486311.969 [NAL9602](INFO): No messages in MT queue
2015-09-29T00:25:11.970Z,1443486311.970 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:12.369Z,1443486312.369 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:12.769Z,1443486312.769 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:13.169Z,1443486313.169 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:13.569Z,1443486313.569 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:13.969Z,1443486313.969 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:14.369Z,1443486314.369 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:14.773Z,1443486314.773 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:15.169Z,1443486315.169 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:15.570Z,1443486315.570 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:15.969Z,1443486315.969 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:16.369Z,1443486316.369 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:16.769Z,1443486316.769 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:16.782Z,1443486316.782 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T00:25:17.169Z,1443486317.169 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:17.569Z,1443486317.569 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:17.970Z,1443486317.970 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:18.369Z,1443486318.369 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:18.769Z,1443486318.769 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:19.169Z,1443486319.169 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:19.570Z,1443486319.570 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:19.970Z,1443486319.970 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:20.370Z,1443486320.370 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:20.771Z,1443486320.771 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T00:25:21.170Z,1443486321.170 [D