2014-08-29T23:53:31.386Z,1409356411.386 [Supervisor](DEBUG): Initializing supervisor.
2014-08-29T23:53:31.388Z,1409356411.388 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2014-08-29T23:53:31.389Z,1409356411.389 [SyncHandler](INFO): Protected caller Thread ID is 5565
2014-08-29T23:53:31.389Z,1409356411.389 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2014-08-29T23:53:31.390Z,1409356411.390 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2014-08-29T23:53:31.391Z,1409356411.391 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 5566
2014-08-29T23:53:31.394Z,1409356411.394 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2014-08-29T23:53:31.405Z,1409356411.405 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2014-08-29T23:53:31.406Z,1409356411.406 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2014-08-29T23:53:31.406Z,1409356411.406 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 5567
2014-08-29T23:53:31.407Z,1409356411.407 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2014-08-29T23:53:31.408Z,1409356411.408 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2014-08-29T23:53:31.408Z,1409356411.408 [logger ThreadHandler](INFO): Protected caller Thread ID is 5568
2014-08-29T23:53:31.410Z,1409356411.410 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2014-08-29T23:53:31.411Z,1409356411.411 [Supervisor](INFO): Looking for Config files in directory: Config/
2014-08-29T23:53:31.412Z,1409356411.412 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2014-08-29T23:53:31.731Z,1409356411.731 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2014-08-29T23:53:31.731Z,1409356411.731 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2014-08-29T23:53:31.884Z,1409356411.884 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2014-08-29T23:53:31.885Z,1409356411.885 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2014-08-29T23:53:31.990Z,1409356411.990 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2014-08-29T23:53:31.991Z,1409356411.991 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2014-08-29T23:53:32.113Z,1409356412.113 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2014-08-29T23:53:32.113Z,1409356412.113 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2014-08-29T23:53:32.198Z,1409356412.198 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2014-08-29T23:53:32.339Z,1409356412.339 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2014-08-29T23:53:32.339Z,1409356412.339 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2014-08-29T23:53:32.423Z,1409356412.423 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2014-08-29T23:53:32.424Z,1409356412.424 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2014-08-29T23:53:32.618Z,1409356412.618 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2014-08-29T23:53:32.619Z,1409356412.619 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2014-08-29T23:53:32.910Z,1409356412.910 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2014-08-29T23:53:32.910Z,1409356412.910 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2014-08-29T23:53:33.207Z,1409356413.207 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2014-08-29T23:53:33.208Z,1409356413.208 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2014-08-29T23:53:33.691Z,1409356413.691 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2014-08-29T23:53:33.692Z,1409356413.692 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2014-08-29T23:53:33.876Z,1409356413.876 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2014-08-29T23:53:33.877Z,1409356413.877 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2014-08-29T23:53:33.978Z,1409356413.978 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2014-08-29T23:53:33.978Z,1409356413.978 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2014-08-29T23:53:34.378Z,1409356414.378 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2014-08-29T23:53:34.379Z,1409356414.379 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2014-08-29T23:53:34.486Z,1409356414.486 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2014-08-29T23:53:34.488Z,1409356414.488 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2014-08-29T23:53:34.489Z,1409356414.489 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2014-08-29T23:53:34.591Z,1409356414.591 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2014-08-29T23:53:34.706Z,1409356414.706 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2014-08-29T23:53:34.802Z,1409356414.802 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Estimation.cfg
2014-08-29T23:53:34.909Z,1409356414.909 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Navigation.cfg
2014-08-29T23:53:35.006Z,1409356415.006 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2014-08-29T23:53:35.131Z,1409356415.131 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2014-08-29T23:53:35.278Z,1409356415.278 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2014-08-29T23:53:35.376Z,1409356415.376 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2014-08-29T23:53:35.460Z,1409356415.460 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/workSite.cfg
2014-08-29T23:53:35.540Z,1409356415.540 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/secure.cfg
2014-08-29T23:53:35.635Z,1409356415.635 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2014-08-29T23:53:35.746Z,1409356415.746 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/root/
2014-08-29T23:53:35.746Z,1409356415.746 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2014-08-29T23:53:35.748Z,1409356415.748 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2014-08-29T23:53:35.798Z,1409356415.798 [VerticalControl](DEBUG): Construct VerticalControl.
2014-08-29T23:53:35.912Z,1409356415.912 [VerticalControl] Loaded
2014-08-29T23:53:35.913Z,1409356415.913 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2014-08-29T23:53:35.913Z,1409356415.913 [HorizontalControl](DEBUG): Construct HorizontalControl.
2014-08-29T23:53:35.982Z,1409356415.982 [HorizontalControl] Loaded
2014-08-29T23:53:35.982Z,1409356415.982 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2014-08-29T23:53:35.983Z,1409356415.983 [SpeedControl](DEBUG): Construct SpeedControl.
2014-08-29T23:53:35.989Z,1409356415.989 [SpeedControl] Loaded
2014-08-29T23:53:35.989Z,1409356415.989 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2014-08-29T23:53:35.989Z,1409356415.989 [LoopControl](DEBUG): Construct LoopControl.
2014-08-29T23:53:35.990Z,1409356415.990 [LoopControl] Loaded
2014-08-29T23:53:35.990Z,1409356415.990 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2014-08-29T23:53:35.991Z,1409356415.991 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2014-08-29T23:53:35.991Z,1409356415.991 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2014-08-29T23:53:36.085Z,1409356416.085 [SBIT](DEBUG): Construct Startup Built In Test.
2014-08-29T23:53:36.096Z,1409356416.096 [SBIT] Loaded
2014-08-29T23:53:36.096Z,1409356416.096 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2014-08-29T23:53:36.097Z,1409356416.097 [IBIT](DEBUG): Construct Initiated Built In Test.
2014-08-29T23:53:36.124Z,1409356416.124 [IBIT] Loaded
2014-08-29T23:53:36.125Z,1409356416.125 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2014-08-29T23:53:36.127Z,1409356416.127 [CBIT](DEBUG): Construct CBIT Built In Test.
2014-08-29T23:53:36.240Z,1409356416.240 [CBIT] Loaded
2014-08-29T23:53:36.241Z,1409356416.241 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2014-08-29T23:53:36.241Z,1409356416.241 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2014-08-29T23:53:36.242Z,1409356416.242 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2014-08-29T23:53:36.289Z,1409356416.289 [DepthRateCalculator] Loaded
2014-08-29T23:53:36.289Z,1409356416.289 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2014-08-29T23:53:36.294Z,1409356416.294 [PitchRateCalculator] Loaded
2014-08-29T23:53:36.295Z,1409356416.295 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2014-08-29T23:53:36.306Z,1409356416.306 [SpeedCalculator] Loaded
2014-08-29T23:53:36.306Z,1409356416.306 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2014-08-29T23:53:36.322Z,1409356416.322 [TempGradientCalculator] Loaded
2014-08-29T23:53:36.322Z,1409356416.322 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2014-08-29T23:53:36.328Z,1409356416.328 [YawRateCalculator] Loaded
2014-08-29T23:53:36.328Z,1409356416.328 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2014-08-29T23:53:36.328Z,1409356416.328 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2014-08-29T23:53:36.329Z,1409356416.329 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2014-08-29T23:53:40.290Z,1409356420.290 [HFRadarCompactModelForecaster] Loaded
2014-08-29T23:53:40.290Z,1409356420.290 [ComponentRegistry](DEBUG): SyncComponent "HFRadarCompactModelForecaster" handled in the control thread.
2014-08-29T23:53:41.414Z,1409356421.414 [HFRCMSpaceInterpolator] Loaded
2014-08-29T23:53:41.414Z,1409356421.414 [ComponentRegistry](DEBUG): SyncComponent "HFRCMSpaceInterpolator" handled in the control thread.
2014-08-29T23:53:41.416Z,1409356421.416 [HFRCMTimeInterpolator] Loaded
2014-08-29T23:53:41.417Z,1409356421.417 [ComponentRegistry](DEBUG): SyncComponent "HFRCMTimeInterpolator" handled in the control thread.
2014-08-29T23:53:42.489Z,1409356422.489 [HFRCMReconstructedInterpolator] Loaded
2014-08-29T23:53:42.489Z,1409356422.489 [ComponentRegistry](DEBUG): SyncComponent "HFRCMReconstructedInterpolator" handled in the control thread.
2014-08-29T23:53:42.501Z,1409356422.501 [HFRCMSurfaceCurrentAtVehicleLocation] Loaded
2014-08-29T23:53:42.501Z,1409356422.501 [ComponentRegistry](DEBUG): SyncComponent "HFRCMSurfaceCurrentAtVehicleLocation" handled in the control thread.
2014-08-29T23:53:42.502Z,1409356422.502 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2014-08-29T23:53:42.502Z,1409356422.502 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2014-08-29T23:53:42.723Z,1409356422.723 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2014-08-29T23:53:42.724Z,1409356422.724 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2014-08-29T23:53:42.801Z,1409356422.801 [DeadReckonUsingMultipleVelocitySourcesVector] Loaded
2014-08-29T23:53:42.802Z,1409356422.802 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySourcesVector" handled in the control thread.
2014-08-29T23:53:42.855Z,1409356422.855 [DeadReckonUsingMultipleVelocitySources] Loaded
2014-08-29T23:53:42.855Z,1409356422.855 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2014-08-29T23:53:42.898Z,1409356422.898 [DeadReckonWithRespectToWater] Loaded
2014-08-29T23:53:42.898Z,1409356422.898 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonWithRespectToWater" handled in the control thread.
2014-08-29T23:53:42.943Z,1409356422.943 [DeadReckonWithRespectToSeafloor] Loaded
2014-08-29T23:53:42.943Z,1409356422.943 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonWithRespectToSeafloor" handled in the control thread.
2014-08-29T23:53:43.000Z,1409356423.000 [DeadReckonUsingDVLWaterTrack] Loaded
2014-08-29T23:53:43.001Z,1409356423.001 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingDVLWaterTrack" handled in the control thread.
2014-08-29T23:53:43.047Z,1409356423.047 [DeadReckonUsingCompactModelForecast] Loaded
2014-08-29T23:53:43.048Z,1409356423.048 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingCompactModelForecast" handled in the control thread.
2014-08-29T23:53:43.064Z,1409356423.064 [NavChart] Loaded
2014-08-29T23:53:43.064Z,1409356423.064 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2014-08-29T23:53:43.068Z,1409356423.068 [UniversalFixResidualReporter] Loaded
2014-08-29T23:53:43.069Z,1409356423.069 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2014-08-29T23:53:43.069Z,1409356423.069 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2014-08-29T23:53:43.070Z,1409356423.070 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2014-08-29T23:53:43.075Z,1409356423.075 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2014-08-29T23:53:43.076Z,1409356423.076 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2014-08-29T23:53:43.268Z,1409356423.268 [CTD_NeilBrown] Loaded
2014-08-29T23:53:43.269Z,1409356423.269 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2014-08-29T23:53:43.270Z,1409356423.270 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 406D14E0
2014-08-29T23:53:43.270Z,1409356423.270 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 5653
2014-08-29T23:53:43.285Z,1409356423.285 [PAR_Licor] Loaded
2014-08-29T23:53:43.285Z,1409356423.285 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2014-08-29T23:53:43.319Z,1409356423.319 [WetLabsBB2FL] Loaded
2014-08-29T23:53:43.320Z,1409356423.320 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2014-08-29T23:53:43.321Z,1409356423.321 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 407014E0
2014-08-29T23:53:43.321Z,1409356423.321 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 5654
2014-08-29T23:53:43.322Z,1409356423.322 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2014-08-29T23:53:43.322Z,1409356423.322 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2014-08-29T23:53:43.595Z,1409356423.595 [AHRS_sp3003D] Loaded
2014-08-29T23:53:43.595Z,1409356423.595 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2014-08-29T23:53:43.849Z,1409356423.849 [Batt_Ocean_Server] Loaded
2014-08-29T23:53:43.850Z,1409356423.850 [ComponentRegistry](DEBUG): SyncComponent "Batt_Ocean_Server" handled in the control thread.
2014-08-29T23:53:43.863Z,1409356423.863 [Depth_Keller] Loaded
2014-08-29T23:53:43.863Z,1409356423.863 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2014-08-29T23:53:43.868Z,1409356423.868 [DropWeight] Loaded
2014-08-29T23:53:43.869Z,1409356423.869 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2014-08-29T23:53:43.998Z,1409356423.998 [DVL_micro] Loaded
2014-08-29T23:53:43.998Z,1409356423.998 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2014-08-29T23:53:44.090Z,1409356424.090 [NAL9602] Loaded
2014-08-29T23:53:44.091Z,1409356424.091 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2014-08-29T23:53:44.132Z,1409356424.132 [Onboard] Loaded
2014-08-29T23:53:44.132Z,1409356424.132 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2014-08-29T23:53:44.140Z,1409356424.140 [Radio_Freewave] Loaded
2014-08-29T23:53:44.140Z,1409356424.140 [ComponentRegistry](DEBUG): Component "Radio_Freewave" handled in its own thread.
2014-08-29T23:53:44.141Z,1409356424.141 [Radio_Freewave ThreadHandler](DEBUG): Created PCaller Thread at 4093D4E0
2014-08-29T23:53:44.142Z,1409356424.142 [Radio_Freewave ThreadHandler](INFO): Protected caller Thread ID is 5655
2014-08-29T23:53:44.287Z,1409356424.287 [DAT] Loaded
2014-08-29T23:53:44.287Z,1409356424.287 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2014-08-29T23:53:44.294Z,1409356424.294 [SCPI] Loaded
2014-08-29T23:53:44.294Z,1409356424.294 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2014-08-29T23:53:44.295Z,1409356424.295 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2014-08-29T23:53:44.295Z,1409356424.295 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2014-08-29T23:53:44.390Z,1409356424.390 [BuoyancyServo] Loaded
2014-08-29T23:53:44.391Z,1409356424.391 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2014-08-29T23:53:44.403Z,1409356424.403 [ElevatorServo] Loaded
2014-08-29T23:53:44.403Z,1409356424.403 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2014-08-29T23:53:44.414Z,1409356424.414 [MassServo] Loaded
2014-08-29T23:53:44.415Z,1409356424.415 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2014-08-29T23:53:44.426Z,1409356424.426 [RudderServo] Loaded
2014-08-29T23:53:44.427Z,1409356424.427 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2014-08-29T23:53:44.438Z,1409356424.438 [ThrusterServo] Loaded
2014-08-29T23:53:44.438Z,1409356424.438 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2014-08-29T23:53:44.438Z,1409356424.438 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2014-08-29T23:53:44.439Z,1409356424.439 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2014-08-29T23:53:44.592Z,1409356424.592 [InternalSim] Loaded
2014-08-29T23:53:44.592Z,1409356424.592 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2014-08-29T23:53:44.593Z,1409356424.593 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2014-08-29T23:53:44.594Z,1409356424.594 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2014-08-29T23:53:44.617Z,1409356424.617 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2014-08-29T23:53:44.619Z,1409356424.619 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2014-08-29T23:53:44.620Z,1409356424.620 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2014-08-29T23:53:44.626Z,1409356424.626 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2014-08-29T23:53:44.630Z,1409356424.630 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 409EE4E0
2014-08-29T23:53:44.630Z,1409356424.630 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 5657
2014-08-29T23:53:44.635Z,1409356424.635 [Supervisor](INFO): Main Thread ID is 5564
2014-08-29T23:53:44.635Z,1409356424.635 [Supervisor](DEBUG): Running supervisor.
2014-08-29T23:53:44.636Z,1409356424.636 [CommandLine ThreadHandler](INFO): Handler Thread ID is 5658
2014-08-29T23:53:44.640Z,1409356424.640 [controlThread ThreadHandler](INFO): Handler Thread ID is 5659
2014-08-29T23:53:44.641Z,1409356424.641 [controlThread](DEBUG): Initializing ControlThread
2014-08-29T23:53:44.642Z,1409356424.642 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2014-08-29T23:53:44.643Z,1409356424.643 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2014-08-29T23:53:44.644Z,1409356424.644 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2014-08-29T23:53:44.644Z,1409356424.644 [LoopControl](DEBUG): Initialize LoopControlComponent.
2014-08-29T23:53:44.645Z,1409356424.645 [SBIT](INFO): Initialize SBIT Component.
2014-08-29T23:53:44.645Z,1409356424.645 [SBIT](IMPORTANT): Tethys CM Info: SVN revision: 11592
2014-08-29T23:53:44.646Z,1409356424.646 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2014-08-29T23:53:44.646Z,1409356424.646 [SBIT](IMPORTANT): Kernel Version:#639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
2014-08-29T23:53:44.646Z,1409356424.646 [IBIT](INFO): Initialize IBIT Component.
2014-08-29T23:53:44.647Z,1409356424.647 [CBIT](DEBUG): Initialize CBIT Component.
2014-08-29T23:53:44.647Z,1409356424.647 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2014-08-29T23:53:44.648Z,1409356424.648 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2014-08-29T23:53:44.649Z,1409356424.649 [logger ThreadHandler](INFO): Handler Thread ID is 5660
2014-08-29T23:53:44.668Z,1409356424.668 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 5661
2014-08-29T23:53:44.669Z,1409356424.669 [CTD_NeilBrown](DEBUG): Initializing CTD_NeilBrown.
2014-08-29T23:53:44.672Z,1409356424.672 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2014-08-29T23:53:44.673Z,1409356424.673 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2014-08-29T23:53:44.673Z,1409356424.673 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2014-08-29T23:53:44.673Z,1409356424.673 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2014-08-29T23:53:44.674Z,1409356424.674 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2014-08-29T23:53:44.681Z,1409356424.681 [HFRadarCompactModelForecaster](DEBUG): Found new ECs!
2014-08-29T23:53:44.692Z,1409356424.692 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2014-08-29T23:53:44.702Z,1409356424.702 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 5663
2014-08-29T23:53:44.703Z,1409356424.703 [WetLabsBB2FL](INFO): Powering down
2014-08-29T23:53:44.737Z,1409356424.737 [Radio_Freewave ThreadHandler](INFO): Handler Thread ID is 5664
2014-08-29T23:53:44.766Z,1409356424.766 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 5666
2014-08-29T23:53:44.771Z,1409356424.771 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2014-08-29T23:53:44.772Z,1409356424.772 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2014-08-29T23:53:44.772Z,1409356424.772 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2014-08-29T23:53:44.772Z,1409356424.772 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2014-08-29T23:53:44.773Z,1409356424.773 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2014-08-29T23:53:44.773Z,1409356424.773 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2014-08-29T23:53:44.773Z,1409356424.773 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2014-08-29T23:53:44.773Z,1409356424.773 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2014-08-29T23:53:44.774Z,1409356424.774 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2014-08-29T23:53:45.049Z,1409356425.049 [Radio_Freewave](INFO): Powering up
2014-08-29T23:53:45.855Z,1409356425.855 [Radio_Freewave](IMPORTANT): Starting PPPD with command:/sbin/pppd nocrtscts /dev/ttyS1 noauth 115200 10.1.1.2:10.1.1.1 persist maxfail 0
2014-08-29T23:53:54.006Z,1409356434.006 [HFRadarCompactModelForecaster](IMPORTANT): forecast time 201408292000 published
2014-08-29T23:53:54.015Z,1409356434.015 [HFRCMSpaceInterpolator](DEBUG): Initializing HFRCMSpaceInterpolator component with verbosity level 0.
2014-08-29T23:53:54.016Z,1409356434.016 [HFRCMTimeInterpolator](DEBUG): Initializing HFRCMTimeInterpolator component.
2014-08-29T23:53:54.017Z,1409356434.017 [HFRCMReconstructedInterpolator](INFO): Initializing HFRCMReconstructedInterpolator component with velocityAccuracy_ = 0.300000 m/s.
2014-08-29T23:53:54.031Z,1409356434.031 [HFRCMSurfaceCurrentAtVehicleLocation](DEBUG): Initializing HFRCMSurfaceCurrentAtVehicleLocation component.
2014-08-29T23:53:54.031Z,1409356434.031 [DeadReckonUsingMultipleVelocitySourcesVector](DEBUG): Initializing DeadReckonUsingMultipleVelocitySourcesVector component.
2014-08-29T23:53:54.032Z,1409356434.032 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2014-08-29T23:53:54.032Z,1409356434.032 [DeadReckonWithRespectToWater](DEBUG): Initializing DeadReckonWithRespectToWater component.
2014-08-29T23:53:54.033Z,1409356434.033 [DeadReckonWithRespectToSeafloor](DEBUG): Initializing DeadReckonWithRespectToSeafloor component.
2014-08-29T23:53:54.033Z,1409356434.033 [DeadReckonUsingDVLWaterTrack](DEBUG): Initializing DeadReckonUsingDVLWaterTrack component.
2014-08-29T23:53:54.034Z,1409356434.034 [DeadReckonUsingCompactModelForecast](DEBUG): Initializing DeadReckonUsingCompactModelForecast component.
2014-08-29T23:53:54.034Z,1409356434.034 [NavChart](DEBUG): Initialize NavChart Navigation.
2014-08-29T23:53:54.050Z,1409356434.050 [UniversalFixResidualReporter](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2014-08-29T23:53:55.834Z,1409356435.834 [Batt_Ocean_Server](INFO): Ocean Server Batteries initialized
2014-08-29T23:53:55.878Z,1409356435.878 [InternalSim](DEBUG):  InternalSim initializing...
2014-08-29T23:53:56.042Z,1409356436.042 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2014-08-29T23:53:56.082Z,1409356436.082 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2014-08-29T23:53:56.138Z,1409356436.138 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://aosn.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://aosn.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://aosn.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://aosn.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://aosn.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2014-08-29T23:53:56.139Z,1409356436.139 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2014-08-29T23:53:56.261Z,1409356436.261 [MissionManager](INFO): DefineArg Default.TimeMissionWasStarted = 0.000000 h
2014-08-29T23:53:56.273Z,1409356436.273 [MissionManager](INFO): DefineArg Default.ElapsedSinceMissionWasStarted = 0.000000 h
2014-08-29T23:53:56.293Z,1409356436.293 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2014-08-29T23:53:56.341Z,1409356436.341 [Default:CheckIn:A.SetSpeed](DEBUG): Construct.
2014-08-29T23:53:56.382Z,1409356436.382 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2014-08-29T23:53:56.418Z,1409356436.418 [Default:WaitAtTheSurface:RunApplicationAtLowSpeed.SetSpeed](DEBUG): Construct.
2014-08-29T23:53:56.465Z,1409356436.465 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Control="Tethys/Control"
xmlns:Guidance="Tethys/Guidance" 
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://aosn.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Control http://aosn.mbari.org/tethys/Xml/Control.xsd
Tethys/Guidance http://aosn.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://aosn.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://aosn.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="TimeMissionWasStarted"><Units:hour/><Value>0</Value></DefineArg>

    <DefineArg Name="ElapsedSinceMissionWasStarted"><Units:hour/><Value>0</Value></DefineArg>

    <Aggregate Id="StartClock">

        <Sequence/>

        <Assign><Arg Name="TimeMissionWasStarted"/><Universal:time/></Assign>

    </Aggregate>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <When>
            <Elapsed><Universal:platform_communications/></Elapsed>
            <Gt><Units:minute/><Value>5.0</Value></Gt>
            <And><Universal:platform_conversation/><Eq><True/></Eq></And>
            <Or><Elapsed><Universal:platform_communications/></Elapsed><Gt><Units:hour/><Value>1.0</Value></Gt></Or>
        </When>

<!-- TODO: Do we really want this When operating on platform_communications? or on something else like time_fix? -->

<!-- Run application at high speed -->

        <Guidance:SetSpeed>
            <Parallel/>
            <Setting><Guidance:SetSpeed.period/><Units:millisecond/><Value>400</Value></Setting>
        </Guidance:SetSpeed>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
<!-- NOTE: Original Default.xml didn't have a timeout on the GPS read, so theoretically could have hung indefinitely there... -->
            <Universal:latitude_fix/>
        </ReadDatum>

<!-- Do data comms -->

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped drop weight due to communications timeout</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

    <Aggregate Id="UpdateAndReportMinutesSinceMissionStarted">

        <When>
            <Elapsed><Arg Name="ElapsedSinceMissionWasStarted"/></Elapsed>
            <Gt><Units:minute/><Value>5.0</Value></Gt>
        </When>

        <Assign><Arg Name="ElapsedSinceMissionWasStarted"/><Universal:time/><Sub><Arg Name="TimeMissionWasStarted"/></Sub></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceMissionWasStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Aggregate Id="WaitAtTheSurface">

        <Sequence/>

        <Guidance:SetSpeed Id="RunApplicationAtLowSpeed">
            <Parallel/>
            <Setting><Guidance:SetSpeed.period/><Units:second/><Value>5</Value></Setting>
        </Guidance:SetSpeed>

    </Aggregate>

</Mission>


2014-08-29T23:53:56.480Z,1409356436.480 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,PAR_Licor,AHRS_sp3003D,Batt_Ocean_Server,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,HFRadarCompactModelForecaster,HFRCMSpaceInterpolator,HFRCMTimeInterpolator,HFRCMReconstructedInterpolator,HFRCMSurfaceCurrentAtVehicleLocation,DeadReckonUsingMultipleVelocitySourcesVector,DeadReckonUsingMultipleVelocitySources,DeadReckonWithRespectToWater,DeadReckonWithRespectToSeafloor,DeadReckonUsingDVLWaterTrack,DeadReckonUsingCompactModelForecast,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2014-08-29T23:53:56.740Z,1409356436.740 [AHRS_sp3003D](DEBUG): Initializing AHRS_sp3003D.
2014-08-29T23:53:56.914Z,1409356436.914 [DVL_micro](INFO): Initializing
2014-08-29T23:53:56.945Z,1409356436.945 [NAL9602](INFO): Powering up NAL9602
2014-08-29T23:53:57.011Z,1409356437.011 [DAT](INFO): Powering up
2014-08-29T23:53:57.011Z,1409356437.011 [DAT](DEBUG): Initializing DAT.
2014-08-29T23:54:05.258Z,1409356445.258 [DeadReckonUsingMultipleVelocitySourcesVector](DEBUG): Could not determine rotation from vehicle frame to navigation frame.
2014-08-29T23:54:05.278Z,1409356445.278 [DeadReckonUsingMultipleVelocitySources](DEBUG): Could not determine rotation from vehicle frame to navigation frame.
2014-08-29T23:54:05.308Z,1409356445.308 [DeadReckonWithRespectToWater](DEBUG): Could not determine rotation from vehicle frame to navigation frame.
2014-08-29T23:54:05.320Z,1409356445.320 [DeadReckonWithRespectToSeafloor](DEBUG): Could not determine rotation from vehicle frame to navigation frame.
2014-08-29T23:54:05.334Z,1409356445.334 [DeadReckonUsingDVLWaterTrack](DEBUG): Could not determine rotation from vehicle frame to navigation frame.
2014-08-29T23:54:05.360Z,1409356445.360 [DeadReckonUsingCompactModelForecast](DEBUG): Could not determine rotation from vehicle frame to navigation frame.
2014-08-29T23:54:05.496Z,1409356445.496 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2014-08-29T23:54:05.504Z,1409356445.504 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2014-08-29T23:54:05.527Z,1409356445.527 [ElevatorServo](DEBUG): Initializing EZServoServo.
2014-08-29T23:54:05.533Z,1409356445.533 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2014-08-29T23:54:05.549Z,1409356445.549 [MassServo](DEBUG): Initializing EZServoServo.
2014-08-29T23:54:05.557Z,1409356445.557 [MassServo](DEBUG): Initializing MassServo.
2014-08-29T23:54:05.566Z,1409356445.566 [RudderServo](DEBUG): Initializing EZServoServo.
2014-08-29T23:54:05.573Z,1409356445.573 [RudderServo](DEBUG): Initializing RudderServo.
2014-08-29T23:54:05.594Z,1409356445.594 [ThrusterServo](DEBUG): Initializing EZServoServo.
2014-08-29T23:54:05.601Z,1409356445.601 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2014-08-29T23:54:06.336Z,1409356446.336 [DeadReckonUsingMultipleVelocitySourcesVector](DEBUG): Could not determine rotation from vehicle frame to navigation frame.
2014-08-29T23:54:06.337Z,1409356446.337 [DeadReckonUsingMultipleVelocitySources](DEBUG): Could not determine rotation from vehicle frame to navigation frame.
2014-08-29T23:54:06.350Z,1409356446.350 [DeadReckonWithRespectToWater](DEBUG): Could not determine rotation from vehicle frame to navigation frame.
2014-08-29T23:54:06.351Z,1409356446.351 [DeadReckonWithRespectToSeafloor](DEBUG): Could not determine rotation from vehicle frame to navigation frame.
2014-08-29T23:54:06.351Z,1409356446.351 [DeadReckonUsingDVLWaterTrack](DEBUG): Could not determine rotation from vehicle frame to navigation frame.
2014-08-29T23:54:06.352Z,1409356446.352 [DeadReckonUsingCompactModelForecast](DEBUG): Could not determine rotation from vehicle frame to navigation frame.
2014-08-29T23:54:06.655Z,1409356446.655 [SBIT](IMPORTANT): Beginning Startup BIT
2014-08-29T23:54:06.657Z,1409356446.657 [CBIT](IMPORTANT): Beginning GF scan
2014-08-29T23:54:09.587Z,1409356449.587 [NAL9602](ERROR): NAL9602 initialize uart error: serial timeout
2014-08-29T23:54:09.587Z,1409356449.587 [NAL9602] Communications Fault, FailCount= 1
2014-08-29T23:54:09.587Z,1409356449.587 [NAL9602](ERROR): Communications Fault
2014-08-29T23:54:09.689Z,1409356449.689 [CBIT](ERROR): Communications Fault in component: NAL9602
2014-08-29T23:54:10.206Z,1409356450.206 [NAL9602](INFO): Powering down
2014-08-29T23:54:11.410Z,1409356451.410 [DVL_micro](DEBUG): LCB error: Software Overcurrent.
2014-08-29T23:54:11.745Z,1409356451.745 [CBIT](INFO): Clearing failed state for component NAL9602
2014-08-29T23:54:11.745Z,1409356451.745 [NAL9602] No Fault, FailCount= 1
2014-08-29T23:54:12.217Z,1409356452.217 [DVL_micro](DEBUG): LCB error: Software Overcurrent.
2014-08-29T23:54:13.092Z,1409356453.092 [DVL_micro](DEBUG): LCB error: Software Overcurrent.
2014-08-29T23:54:13.635Z,1409356453.635 [DVL_micro](DEBUG): LCB error