2014-05-05T23:21:38.802Z,1399332098.802 [Supervisor](DEBUG): Initializing supervisor.
2014-05-05T23:21:38.805Z,1399332098.805 [SyncHandler](DEBUG): Created PCaller Thread at 4033C4E0
2014-05-05T23:21:38.805Z,1399332098.805 [SyncHandler](INFO): Protected caller Thread ID is 920
2014-05-05T23:21:38.806Z,1399332098.806 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2014-05-05T23:21:38.807Z,1399332098.807 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4036C4E0
2014-05-05T23:21:38.807Z,1399332098.807 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 921
2014-05-05T23:21:38.810Z,1399332098.810 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2014-05-05T23:21:38.918Z,1399332098.918 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2014-05-05T23:21:38.920Z,1399332098.920 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 4039C4E0
2014-05-05T23:21:38.920Z,1399332098.920 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 922
2014-05-05T23:21:38.921Z,1399332098.921 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2014-05-05T23:21:38.922Z,1399332098.922 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403CC4E0
2014-05-05T23:21:38.922Z,1399332098.922 [logger ThreadHandler](INFO): Protected caller Thread ID is 923
2014-05-05T23:21:38.924Z,1399332098.924 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2014-05-05T23:21:38.925Z,1399332098.925 [Supervisor](INFO): Looking for Config files in directory: Config/
2014-05-05T23:21:38.926Z,1399332098.926 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2014-05-05T23:21:39.284Z,1399332099.284 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2014-05-05T23:21:39.285Z,1399332099.285 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2014-05-05T23:21:39.571Z,1399332099.571 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2014-05-05T23:21:39.571Z,1399332099.571 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2014-05-05T23:21:39.661Z,1399332099.661 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2014-05-05T23:21:39.662Z,1399332099.662 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2014-05-05T23:21:39.866Z,1399332099.866 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2014-05-05T23:21:39.867Z,1399332099.867 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2014-05-05T23:21:40.031Z,1399332100.031 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2014-05-05T23:21:40.032Z,1399332100.032 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2014-05-05T23:21:40.337Z,1399332100.337 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2014-05-05T23:21:40.338Z,1399332100.338 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2014-05-05T23:21:40.525Z,1399332100.525 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2014-05-05T23:21:40.526Z,1399332100.526 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2014-05-05T23:21:40.886Z,1399332100.886 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2014-05-05T23:21:40.887Z,1399332100.887 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2014-05-05T23:21:41.001Z,1399332101.001 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2014-05-05T23:21:41.001Z,1399332101.001 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2014-05-05T23:21:41.507Z,1399332101.507 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2014-05-05T23:21:41.508Z,1399332101.508 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2014-05-05T23:21:41.623Z,1399332101.623 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2014-05-05T23:21:41.623Z,1399332101.623 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2014-05-05T23:21:41.716Z,1399332101.716 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2014-05-05T23:21:41.830Z,1399332101.830 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2014-05-05T23:21:41.831Z,1399332101.831 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2014-05-05T23:21:41.938Z,1399332101.938 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2014-05-05T23:21:41.938Z,1399332101.938 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2014-05-05T23:21:42.081Z,1399332102.081 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2014-05-05T23:21:42.083Z,1399332102.083 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2014-05-05T23:21:42.084Z,1399332102.084 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2014-05-05T23:21:42.225Z,1399332102.225 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2014-05-05T23:21:42.383Z,1399332102.383 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/secure.cfg
2014-05-05T23:21:42.484Z,1399332102.484 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2014-05-05T23:21:42.580Z,1399332102.580 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2014-05-05T23:21:42.738Z,1399332102.738 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2014-05-05T23:21:42.858Z,1399332102.858 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2014-05-05T23:21:42.948Z,1399332102.948 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2014-05-05T23:21:43.056Z,1399332103.056 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2014-05-05T23:21:43.160Z,1399332103.160 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Navigation.cfg
2014-05-05T23:21:43.263Z,1399332103.263 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/workSite.cfg
2014-05-05T23:21:43.356Z,1399332103.356 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Estimation.cfg
2014-05-05T23:21:43.457Z,1399332103.457 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/LOGIN/
2014-05-05T23:21:43.458Z,1399332103.458 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2014-05-05T23:21:43.459Z,1399332103.459 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2014-05-05T23:21:43.776Z,1399332103.776 [AHRS_sp3003D] Loaded
2014-05-05T23:21:43.776Z,1399332103.776 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2014-05-05T23:21:44.062Z,1399332104.062 [Batt_Ocean_Server] Loaded
2014-05-05T23:21:44.062Z,1399332104.062 [ComponentRegistry](DEBUG): SyncComponent "Batt_Ocean_Server" handled in the control thread.
2014-05-05T23:21:44.148Z,1399332104.148 [DataOverHttps] Loaded
2014-05-05T23:21:44.148Z,1399332104.148 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2014-05-05T23:21:44.161Z,1399332104.161 [Depth_Keller] Loaded
2014-05-05T23:21:44.161Z,1399332104.161 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2014-05-05T23:21:44.165Z,1399332104.165 [DropWeight] Loaded
2014-05-05T23:21:44.166Z,1399332104.166 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2014-05-05T23:21:44.261Z,1399332104.261 [NAL9602] Loaded
2014-05-05T23:21:44.262Z,1399332104.262 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2014-05-05T23:21:44.311Z,1399332104.311 [Onboard] Loaded
2014-05-05T23:21:44.312Z,1399332104.312 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2014-05-05T23:21:44.318Z,1399332104.318 [Radio_Freewave] Loaded
2014-05-05T23:21:44.319Z,1399332104.319 [ComponentRegistry](DEBUG): SyncComponent "Radio_Freewave" handled in the control thread.
2014-05-05T23:21:44.320Z,1399332104.320 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2014-05-05T23:21:44.320Z,1399332104.320 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2014-05-05T23:21:44.572Z,1399332104.572 [ExternalSim] Loaded
2014-05-05T23:21:44.573Z,1399332104.573 [ComponentRegistry](DEBUG): SyncComponent "ExternalSim" handled in the control thread.
2014-05-05T23:21:44.625Z,1399332104.625 [InternalSim] Loaded
2014-05-05T23:21:44.625Z,1399332104.625 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2014-05-05T23:21:44.626Z,1399332104.626 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2014-05-05T23:21:44.627Z,1399332104.627 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2014-05-05T23:21:44.854Z,1399332104.854 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2014-05-05T23:21:44.855Z,1399332104.855 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2014-05-05T23:21:44.861Z,1399332104.861 [AsyncPiEstimator](DEBUG): Construct AsyncPiEstimator.
2014-05-05T23:21:44.866Z,1399332104.866 [AsyncPiEstimator] Loaded
2014-05-05T23:21:44.866Z,1399332104.866 [ComponentRegistry](DEBUG): Component "AsyncPiEstimator" handled in its own thread.
2014-05-05T23:21:44.867Z,1399332104.867 [AsyncPiEstimator ThreadHandler](DEBUG): Created PCaller Thread at 406A34E0
2014-05-05T23:21:44.867Z,1399332104.867 [AsyncPiEstimator ThreadHandler](INFO): Protected caller Thread ID is 1005
2014-05-05T23:21:44.868Z,1399332104.868 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2014-05-05T23:21:44.869Z,1399332104.869 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2014-05-05T23:21:44.950Z,1399332104.950 [DeadReckonUsingMultipleVelocitySources] Loaded
2014-05-05T23:21:44.950Z,1399332104.950 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2014-05-05T23:21:44.966Z,1399332104.966 [NavChart] Loaded
2014-05-05T23:21:44.966Z,1399332104.966 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2014-05-05T23:21:44.970Z,1399332104.970 [UniversalFixResidualReporter] Loaded
2014-05-05T23:21:44.971Z,1399332104.971 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2014-05-05T23:21:44.971Z,1399332104.971 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2014-05-05T23:21:44.972Z,1399332104.972 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2014-05-05T23:21:45.018Z,1399332105.018 [VerticalControl](DEBUG): Construct VerticalControl.
2014-05-05T23:21:45.121Z,1399332105.121 [VerticalControl] Loaded
2014-05-05T23:21:45.121Z,1399332105.121 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2014-05-05T23:21:45.122Z,1399332105.122 [HorizontalControl](DEBUG): Construct HorizontalControl.
2014-05-05T23:21:45.187Z,1399332105.187 [HorizontalControl] Loaded
2014-05-05T23:21:45.187Z,1399332105.187 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2014-05-05T23:21:45.188Z,1399332105.188 [SpeedControl](DEBUG): Construct SpeedControl.
2014-05-05T23:21:45.189Z,1399332105.189 [SpeedControl] Loaded
2014-05-05T23:21:45.190Z,1399332105.190 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2014-05-05T23:21:45.190Z,1399332105.190 [LoopControl](DEBUG): Construct LoopControl.
2014-05-05T23:21:45.191Z,1399332105.191 [LoopControl] Loaded
2014-05-05T23:21:45.191Z,1399332105.191 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2014-05-05T23:21:45.192Z,1399332105.192 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2014-05-05T23:21:45.192Z,1399332105.192 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2014-05-05T23:21:45.210Z,1399332105.210 [DepthRateCalculator] Loaded
2014-05-05T23:21:45.210Z,1399332105.210 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2014-05-05T23:21:45.215Z,1399332105.215 [PitchRateCalculator] Loaded
2014-05-05T23:21:45.216Z,1399332105.216 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2014-05-05T23:21:45.223Z,1399332105.223 [SpeedCalculator] Loaded
2014-05-05T23:21:45.223Z,1399332105.223 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2014-05-05T23:21:45.239Z,1399332105.239 [TempGradientCalculator] Loaded
2014-05-05T23:21:45.239Z,1399332105.239 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2014-05-05T23:21:45.244Z,1399332105.244 [YawRateCalculator] Loaded
2014-05-05T23:21:45.244Z,1399332105.244 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2014-05-05T23:21:45.245Z,1399332105.245 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2014-05-05T23:21:45.245Z,1399332105.245 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2014-05-05T23:21:45.344Z,1399332105.344 [CTD_NeilBrown] Loaded
2014-05-05T23:21:45.345Z,1399332105.345 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2014-05-05T23:21:45.346Z,1399332105.346 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 407454E0
2014-05-05T23:21:45.346Z,1399332105.346 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 1006
2014-05-05T23:21:45.358Z,1399332105.358 [ISUS] Loaded
2014-05-05T23:21:45.359Z,1399332105.359 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2014-05-05T23:21:45.373Z,1399332105.373 [PAR_Licor] Loaded
2014-05-05T23:21:45.374Z,1399332105.374 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2014-05-05T23:21:45.407Z,1399332105.407 [WetLabsBB2FL] Loaded
2014-05-05T23:21:45.408Z,1399332105.408 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2014-05-05T23:21:45.409Z,1399332105.409 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 407754E0
2014-05-05T23:21:45.409Z,1399332105.409 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 1007
2014-05-05T23:21:45.410Z,1399332105.410 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2014-05-05T23:21:45.410Z,1399332105.410 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2014-05-05T23:21:45.499Z,1399332105.499 [SBIT](DEBUG): Construct Startup Built In Test.
2014-05-05T23:21:45.510Z,1399332105.510 [SBIT] Loaded
2014-05-05T23:21:45.510Z,1399332105.510 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2014-05-05T23:21:45.511Z,1399332105.511 [IBIT](DEBUG): Construct Initiated Built In Test.
2014-05-05T23:21:45.522Z,1399332105.522 [IBIT] Loaded
2014-05-05T23:21:45.523Z,1399332105.523 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2014-05-05T23:21:45.525Z,1399332105.525 [CBIT](DEBUG): Construct CBIT Built In Test.
2014-05-05T23:21:45.591Z,1399332105.591 [CBIT] Loaded
2014-05-05T23:21:45.592Z,1399332105.592 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2014-05-05T23:21:45.592Z,1399332105.592 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2014-05-05T23:21:45.593Z,1399332105.593 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2014-05-05T23:21:45.633Z,1399332105.633 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2014-05-05T23:21:45.633Z,1399332105.633 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2014-05-05T23:21:45.723Z,1399332105.723 [BuoyancyServo] Loaded
2014-05-05T23:21:45.723Z,1399332105.723 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2014-05-05T23:21:45.731Z,1399332105.731 [ElevatorServo] Loaded
2014-05-05T23:21:45.732Z,1399332105.732 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2014-05-05T23:21:45.739Z,1399332105.739 [MassServo] Loaded
2014-05-05T23:21:45.740Z,1399332105.740 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2014-05-05T23:21:45.748Z,1399332105.748 [RudderServo] Loaded
2014-05-05T23:21:45.748Z,1399332105.748 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2014-05-05T23:21:45.755Z,1399332105.755 [ThrusterServo] Loaded
2014-05-05T23:21:45.756Z,1399332105.756 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2014-05-05T23:21:45.756Z,1399332105.756 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2014-05-05T23:21:45.757Z,1399332105.757 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2014-05-05T23:21:45.779Z,1399332105.779 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2014-05-05T23:21:45.781Z,1399332105.781 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2014-05-05T23:21:45.782Z,1399332105.782 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2014-05-05T23:21:45.788Z,1399332105.788 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2014-05-05T23:21:45.789Z,1399332105.789 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408444E0
2014-05-05T23:21:45.789Z,1399332105.789 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 1008
2014-05-05T23:21:45.794Z,1399332105.794 [Supervisor](INFO): Main Thread ID is 919
2014-05-05T23:21:45.794Z,1399332105.794 [Supervisor](DEBUG): Running supervisor.
2014-05-05T23:21:45.795Z,1399332105.795 [CommandLine ThreadHandler](INFO): Handler Thread ID is 1009
2014-05-05T23:21:45.797Z,1399332105.797 [controlThread ThreadHandler](INFO): Handler Thread ID is 1010
2014-05-05T23:21:45.797Z,1399332105.797 [controlThread](DEBUG): Initializing ControlThread
2014-05-05T23:21:45.801Z,1399332105.801 [logger ThreadHandler](INFO): Handler Thread ID is 1011
2014-05-05T23:21:45.821Z,1399332105.821 [AsyncPiEstimator ThreadHandler](INFO): Handler Thread ID is 1012
2014-05-05T23:21:45.821Z,1399332105.821 [AsyncPiEstimator](DEBUG): Initialize AsyncPiEstimator.
2014-05-05T23:21:45.841Z,1399332105.841 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 1013
2014-05-05T23:21:45.841Z,1399332105.841 [CTD_NeilBrown](DEBUG): Initializing CTD_NeilBrown.
2014-05-05T23:21:45.861Z,1399332105.861 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 1014
2014-05-05T23:21:45.873Z,1399332105.873 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 1015
2014-05-05T23:21:45.876Z,1399332105.876 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2014-05-05T23:21:45.877Z,1399332105.877 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2014-05-05T23:21:45.877Z,1399332105.877 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2014-05-05T23:21:45.877Z,1399332105.877 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2014-05-05T23:21:45.877Z,1399332105.877 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2014-05-05T23:21:45.878Z,1399332105.878 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2014-05-05T23:21:45.878Z,1399332105.878 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2014-05-05T23:21:45.878Z,1399332105.878 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2014-05-05T23:21:45.878Z,1399332105.878 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2014-05-05T23:21:46.249Z,1399332106.249 [CTD_NeilBrown](ERROR): Salinity reading out of range: 0.000000 psu
2014-05-05T23:21:47.127Z,1399332107.127 [Batt_Ocean_Server](ERROR): Batt_Ocean_Server A initialization uart error: serial timeout
2014-05-05T23:21:47.127Z,1399332107.127 [Batt_Ocean_Server](ERROR): Ocean Server Batteries failed to initialize. Re-initializing
2014-05-05T23:21:47.127Z,1399332107.127 [Batt_Ocean_Server] Communications Fault, FailCount= 1
2014-05-05T23:21:47.127Z,1399332107.127 [Batt_Ocean_Server](ERROR): Communications Fault
2014-05-05T23:21:47.131Z,1399332107.131 [ExternalSim](INFO): ExternalSim initializing...
2014-05-05T23:21:47.269Z,1399332107.269 [ExternalSim](DEBUG): beaconLat = 36.81340
2014-05-05T23:21:47.269Z,1399332107.269 [ExternalSim](DEBUG): beaconLon = -121.82240
2014-05-05T23:21:47.269Z,1399332107.269 [ExternalSim](DEBUG): beaconDepth = 25.00
2014-05-05T23:21:47.279Z,1399332107.279 [ExternalSim](DEBUG): Simulator initialized
2014-05-05T23:21:47.298Z,1399332107.298 [InternalSim](DEBUG):  InternalSim initializing...
2014-05-05T23:21:47.403Z,1399332107.403 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2014-05-05T23:21:47.404Z,1399332107.404 [NavChart](DEBUG): Initialize NavChart Navigation.
2014-05-05T23:21:47.404Z,1399332107.404 [UniversalFixResidualReporter](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2014-05-05T23:21:47.405Z,1399332107.405 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2014-05-05T23:21:47.406Z,1399332107.406 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2014-05-05T23:21:47.419Z,1399332107.419 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2014-05-05T23:21:47.419Z,1399332107.419 [LoopControl](DEBUG): Initialize LoopControlComponent.
2014-05-05T23:21:47.420Z,1399332107.420 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2014-05-05T23:21:47.420Z,1399332107.420 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2014-05-05T23:21:47.421Z,1399332107.421 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2014-05-05T23:21:47.421Z,1399332107.421 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2014-05-05T23:21:47.422Z,1399332107.422 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2014-05-05T23:21:47.423Z,1399332107.423 [SBIT](INFO): Initialize SBIT Component.
2014-05-05T23:21:47.423Z,1399332107.423 [SBIT](IMPORTANT): Tethys CM Info: 
$Rev:11264
2014-05-05T23:21:47.424Z,1399332107.424 [SBIT](IMPORTANT): Kernel Release:2.6.27.8
2014-05-05T23:21:47.424Z,1399332107.424 [SBIT](IMPORTANT): Kernel Version:#639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
2014-05-05T23:21:47.425Z,1399332107.425 [IBIT](INFO): Initialize IBIT Component.
2014-05-05T23:21:47.425Z,1399332107.425 [CBIT](DEBUG): Initialize CBIT Component.
2014-05-05T23:21:47.426Z,1399332107.426 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2014-05-05T23:21:47.426Z,1399332107.426 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2014-05-05T23:21:47.453Z,1399332107.453 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2014-05-05T23:21:47.463Z,1399332107.463 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2014-05-05T23:21:47.478Z,1399332107.478 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://aosn.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://aosn.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://aosn.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://aosn.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://aosn.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2014-05-05T23:21:47.479Z,1399332107.479 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2014-05-05T23:21:47.570Z,1399332107.570 [MissionManager](INFO): DefineArg Default.NeedGPS = 1 bool
2014-05-05T23:21:47.599Z,1399332107.599 [Default:GPS:A.SetSpeed](DEBUG): Construct.
2014-05-05T23:21:47.603Z,1399332107.603 [Default:GPS:B.GoToSurface](DEBUG): Construct GoToSurface.
2014-05-05T23:21:47.623Z,1399332107.623 [Default:Iridium:A.SetSpeed](DEBUG): Construct.
2014-05-05T23:21:47.626Z,1399332107.626 [Default:Iridium:B.GoToSurface](DEBUG): Construct GoToSurface.
2014-05-05T23:21:47.656Z,1399332107.656 [Default:Iridium:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2014-05-05T23:21:47.698Z,1399332107.698 [Default:WaitAtTheSurface:RunAtLowSpeed.SetSpeed](DEBUG): Construct.
2014-05-05T23:21:47.705Z,1399332107.705 [Default:WaitAtTheSurface:B.GoToSurface](DEBUG): Construct GoToSurface.
2014-05-05T23:21:47.731Z,1399332107.731 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Control="Tethys/Control"
xmlns:Guidance="Tethys/Guidance" 
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://aosn.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Control http://aosn.mbari.org/tethys/Xml/Control.xsd
Tethys/Guidance http://aosn.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://aosn.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://aosn.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="NeedGPS"><True/></DefineArg>

    <Aggregate Id="GPS">

        <When>
            <Arg Name="NeedGPS"/>
        </When>

<!-- Run at high speed -->

        <Guidance:SetSpeed>
            <Parallel/>
            <Setting><Guidance:SetSpeed.period/><Units:millisecond/><Value>400</Value></Setting>
        </Guidance:SetSpeed>

<!-- Get to the surface -->

        <Guidance:GoToSurface>
            <Sequence/>
        </Guidance:GoToSurface>

<!-- Get GPS fix -->

        <ReadDatum Id="Read_GPS">
            <Universal:latitude_fix/>
        </ReadDatum>

        <Assign><Sequence/><Arg Name="NeedGPS"/><False/></Assign>

    </Aggregate>

    <Aggregate Id="Iridium">

        <Sequence/>

<!-- Run at high speed -->

        <Guidance:SetSpeed>
            <Parallel/>
            <Setting><Guidance:SetSpeed.period/><Units:millisecond/><Value>400</Value></Setting>
        </Guidance:SetSpeed>

<!-- Get to the surface -->

        <Guidance:GoToSurface>
            <Sequence/>
        </Guidance:GoToSurface>

<!-- Do data comms -->

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped drop weight due to communications timeout</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

    <Aggregate Id="CallIridium">

        <When>
            <Elapsed><Universal:platform_communications/></Elapsed>
            <Gt><Units:minute/><Value>5.0</Value></Gt>
            <And><Universal:platform_conversation/><Eq><True/></Eq></And>
            <Or><Elapsed><Universal:platform_communications/></Elapsed><Gt><Units:hour/><Value>1.0</Value></Gt></Or>
        </When>

        <Assign><Sequence/><Arg Name="NeedGPS"/><True/></Assign>

        <Call RefId="Iridium"/>

    </Aggregate>

    <Aggregate Id="WaitAtTheSurface">

        <Sequence/>

        <Guidance:SetSpeed Id="RunAtLowSpeed">
            <Parallel/>
            <Setting><Guidance:SetSpeed.period/><Units:second/><Value>5</Value></Setting>
        </Guidance:SetSpeed>

        <Guidance:GoToSurface>
            <Parallel/>
        </Guidance:GoToSurface>

    </Aggregate>

</Mission>


2014-05-05T23:21:47.736Z,1399332107.736 [controlThread](DEBUG): Component order: CycleStarter,ExternalSim,InternalSim,AHRS_sp3003D,Batt_Ocean_Server,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,Radio_Freewave,ISUS,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,DeadReckonUsingMultipleVelocitySources,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2014-05-05T23:21:48.182Z,1399332108.182 [Radio_Freewave](INFO): Powering up
2014-05-05T23:21:48.409Z,1399332108.409 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2014-05-05T23:21:48.417Z,1399332108.417 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2014-05-05T23:21:48.431Z,1399332108.431 [ElevatorServo](DEBUG): Initializing EZServoServo.
2014-05-05T23:21:48.437Z,1399332108.437 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2014-05-05T23:21:48.461Z,1399332108.461 [MassServo](DEBUG): Initializing EZServoServo.
2014-05-05T23:21:48.469Z,1399332108.469 [MassServo](DEBUG): Initializing MassServo.
2014-05-05T23:21:48.475Z,1399332108.475 [RudderServo](DEBUG): Initializing EZServoServo.
2014-05-05T23:21:48.481Z,1399332108.481 [RudderServo](DEBUG): Initializing RudderServo.
2014-05-05T23:21:48.486Z,1399332108.486 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2014-05-05T23:21:48.551Z,1399332108.551 [CBIT](ERROR): Communications Fault in component: Batt_Ocean_Server
2014-05-05T23:21:48.551Z,1399332108.551 [CBIT](INFO): Clearing failed state for component Batt_Ocean_Server
2014-05-05T23:21:48.551Z,1399332108.551 [Batt_Ocean_Server] No Fault, FailCount= 1
2014-05-05T23:21:50.300Z,1399332110.300 [Batt_Ocean_Server](INFO): Ocean Server Batteries initialized
2014-05-05T23:21:50.344Z,1399332110.344 [Radio_Freewave](IMPORTANT): Starting PPPD with command:/sbin/pppd nocrtscts /dev/ttyS1 noauth 115200 10.1.1.2:10.1.1.1 persist maxfail 0
2014-05-05T23:21:53.923Z,1399332113.923 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003207
2014-05-05T23:21:56.854Z,1399332116.854 [NAL9602](IMPORTANT): GPS fix at: 1399332116.85
2014-05-05T23:21:58.006Z,1399332118.006 [NAL9602](INFO): No messages in MT queue
2014-05-05T23:22:02.883Z,1399332122.883 [SBIT](IMPORTANT): Beginning Startup BIT
2014-05-05T23:22:02.886Z,1399332122.886 [CBIT](IMPORTANT): Beginning GF scan
2014-05-05T23:22:03.623Z,1399332123.623 [NAL9602](INFO): Powering down
2014-05-05T23:22:17.567Z,1399332137.567 [CommandLine](IMPORTANT): got command quit
2014-05-05T23:22:18.575Z,1399332138.575 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2014-05-05T23:22:18.575Z,1399332138.575 [CommandLine ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:18.591Z,1399332138.591 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2014-05-05T23:22:18.591Z,1399332138.591 [CommandLine ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:18.592Z,1399332138.592 [CommandLine](INFO): Join timeout helper Thread ID is 1024
2014-05-05T23:22:18.598Z,1399332138.598 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2014-05-05T23:22:18.599Z,1399332138.599 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:18.599Z,1399332138.599 [NavChartDb](INFO): Join timeout helper Thread ID is 1025
2014-05-05T23:22:20.729Z,1399332140.729 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2014-05-05T23:22:20.729Z,1399332140.729 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:20.730Z,1399332140.730 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2014-05-05T23:22:20.730Z,1399332140.730 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:20.731Z,1399332140.731 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 1026
2014-05-05T23:22:20.825Z,1399332140.825 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2014-05-05T23:22:20.826Z,1399332140.826 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:20.827Z,1399332140.827 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler
2014-05-05T23:22:20.828Z,1399332140.828 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:20.828Z,1399332140.828 [CTD_NeilBrown](INFO): Join timeout helper Thread ID is 1027
2014-05-05T23:22:21.216Z,1399332141.216 [CTD_NeilBrown ThreadHandler](INFO): Uninitializing protected caller thread.
2014-05-05T23:22:21.216Z,1399332141.216 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:21.227Z,1399332141.227 [ComponentRegistry](INFO): Shutting down AsyncPiEstimator ThreadHandler
2014-05-05T23:22:21.227Z,1399332141.227 [AsyncPiEstimator ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:21.228Z,1399332141.228 [AsyncPiEstimator](INFO): Join timeout helper Thread ID is 1028
2014-05-05T23:22:21.492Z,1399332141.492 [AsyncPiEstimator ThreadHandler](INFO): Uninitializing protected caller thread.
2014-05-05T23:22:21.492Z,1399332141.492 [AsyncPiEstimator](DEBUG): Uninitialize AsyncPiEstimator.
2014-05-05T23:22:21.492Z,1399332141.492 [AsyncPiEstimator ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:21.501Z,1399332141.501 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2014-05-05T23:22:21.501Z,1399332141.501 [logger ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:21.501Z,1399332141.501 [logger](INFO): Join timeout helper Thread ID is 1030
2014-05-05T23:22:21.528Z,1399332141.528 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2014-05-05T23:22:21.528Z,1399332141.528 [logger ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:21.540Z,1399332141.540 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2014-05-05T23:22:21.541Z,1399332141.541 [CommandLine ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:21.541Z,1399332141.541 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2014-05-05T23:22:21.541Z,1399332141.541 [controlThread ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:21.541Z,1399332141.541 [controlThread](INFO): Join timeout helper Thread ID is 1031
2014-05-05T23:22:21.568Z,1399332141.568 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2014-05-05T23:22:21.568Z,1399332141.568 [controlThread](DEBUG): Uninitializing ControlThread
2014-05-05T23:22:21.570Z,1399332141.570 [NAL9602](INFO): Powering down
2014-05-05T23:22:21.662Z,1399332141.662 [Radio_Freewave](INFO): Powering down
2014-05-05T23:22:21.664Z,1399332141.664 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2014-05-05T23:22:21.665Z,1399332141.665 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2014-05-05T23:22:21.671Z,1399332141.671 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2014-05-05T23:22:21.672Z,1399332141.672 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2014-05-05T23:22:21.672Z,1399332141.672 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2014-05-05T23:22:21.672Z,1399332141.672 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2014-05-05T23:22:21.673Z,1399332141.673 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2014-05-05T23:22:21.673Z,1399332141.673 [BuoyancyServo](INFO): Powering down
2014-05-05T23:22:21.688Z,1399332141.688 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2014-05-05T23:22:21.688Z,1399332141.688 [ElevatorServo](INFO): Powering down
2014-05-05T23:22:21.689Z,1399332141.689 [MassServo](DEBUG): Uninitialize Mass Servo.
2014-05-05T23:22:21.689Z,1399332141.689 [MassServo](INFO): Powering down
2014-05-05T23:22:21.690Z,1399332141.690 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2014-05-05T23:22:21.691Z,1399332141.691 [RudderServo](INFO): Powering down
2014-05-05T23:22:21.692Z,1399332141.692 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2014-05-05T23:22:21.692Z,1399332141.692 [SBIT](DEBUG): Uninitialize SBIT Component.
2014-05-05T23:22:21.692Z,1399332141.692 [IBIT](DEBUG): Uninitialize IBIT Component.
2014-05-05T23:22:21.693Z,1399332141.693 [CBIT](DEBUG): Uninitialize CBIT Component.
2014-05-05T23:22:21.725Z,1399332141.725 [controlThread ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:21.798Z,1399332141.798 [AsyncPiEstimator ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:21.820Z,1399332141.820 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:21.824Z,1399332141.824 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:22.209Z,1399332142.209 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2014-05-05T23:22:22.251Z,1399332142.251 [logger ThreadHandler](INFO): Thread cancelled.