2012-10-26T15:16:55.850Z,1351264615.850 [Supervisor](DEBUG): Initializing supervisor.
2012-10-26T15:16:55.854Z,1351264615.854 [SyncHandler](DEBUG): Created PCaller Thread at 4033B4E0
2012-10-26T15:16:55.855Z,1351264615.855 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2012-10-26T15:16:55.858Z,1351264615.858 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4036B4E0
2012-10-26T15:16:55.862Z,1351264615.862 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2012-10-26T15:16:55.874Z,1351264615.874 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2012-10-26T15:16:55.878Z,1351264615.878 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 4039B4E0
2012-10-26T15:16:55.879Z,1351264615.879 [ComponentRegistry](DEBUG): SyncComponent "logger" handled in the control thread.
2012-10-26T15:16:55.880Z,1351264615.880 [Supervisor](INFO): Looking for Config files in directory: Config/
2012-10-26T15:16:55.883Z,1351264615.883 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2012-10-26T15:16:56.201Z,1351264616.201 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2012-10-26T15:16:56.203Z,1351264616.203 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2012-10-26T15:16:56.403Z,1351264616.403 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2012-10-26T15:16:56.403Z,1351264616.403 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2012-10-26T15:16:56.502Z,1351264616.501 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2012-10-26T15:16:56.504Z,1351264616.504 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2012-10-26T15:16:56.739Z,1351264616.739 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2012-10-26T15:16:56.740Z,1351264616.740 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2012-10-26T15:16:56.893Z,1351264616.894 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2012-10-26T15:16:56.896Z,1351264616.896 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2012-10-26T15:16:57.163Z,1351264617.163 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2012-10-26T15:16:57.164Z,1351264617.164 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2012-10-26T15:16:57.358Z,1351264617.358 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2012-10-26T15:16:57.361Z,1351264617.361 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2012-10-26T15:16:57.657Z,1351264617.657 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2012-10-26T15:16:57.659Z,1351264617.659 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2012-10-26T15:16:57.770Z,1351264617.770 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2012-10-26T15:16:57.770Z,1351264617.770 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2012-10-26T15:16:58.235Z,1351264618.235 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2012-10-26T15:16:58.236Z,1351264618.236 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2012-10-26T15:16:58.367Z,1351264618.367 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2012-10-26T15:16:58.368Z,1351264618.368 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2012-10-26T15:16:58.463Z,1351264618.463 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2012-10-26T15:16:58.467Z,1351264618.467 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2012-10-26T15:16:58.582Z,1351264618.582 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2012-10-26T15:16:58.733Z,1351264618.733 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2012-10-26T15:16:58.830Z,1351264618.830 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2012-10-26T15:16:58.946Z,1351264618.946 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2012-10-26T15:16:59.058Z,1351264619.058 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2012-10-26T15:16:59.193Z,1351264619.193 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2012-10-26T15:16:59.299Z,1351264619.299 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2012-10-26T15:16:59.612Z,1351264619.612 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2012-10-26T15:17:01.344Z,1351264621.344 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2012-10-26T15:17:01.590Z,1351264621.590 [InternalSim] Loaded
2012-10-26T15:17:01.590Z,1351264621.590 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2012-10-26T15:17:01.591Z,1351264621.591 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2012-10-26T15:17:01.592Z,1351264621.592 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2012-10-26T15:17:01.701Z,1351264621.701 [SBIT](DEBUG): Construct Startup Built In Test.
2012-10-26T15:17:01.715Z,1351264621.715 [SBIT] Loaded
2012-10-26T15:17:01.715Z,1351264621.715 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2012-10-26T15:17:01.716Z,1351264621.716 [IBIT](DEBUG): Construct Initiated Built In Test.
2012-10-26T15:17:01.763Z,1351264621.763 [IBIT] Loaded
2012-10-26T15:17:01.763Z,1351264621.763 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2012-10-26T15:17:01.767Z,1351264621.767 [CBIT](DEBUG): Construct CBIT Built In Test.
2012-10-26T15:17:01.948Z,1351264621.948 [CBIT] Loaded
2012-10-26T15:17:01.948Z,1351264621.948 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2012-10-26T15:17:01.949Z,1351264621.949 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2012-10-26T15:17:01.950Z,1351264621.950 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2012-10-26T15:17:02.149Z,1351264622.149 [BuoyancyServo] Loaded
2012-10-26T15:17:02.149Z,1351264622.149 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2012-10-26T15:17:02.159Z,1351264622.159 [ElevatorServo] Loaded
2012-10-26T15:17:02.159Z,1351264622.159 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2012-10-26T15:17:02.184Z,1351264622.184 [MassServo] Loaded
2012-10-26T15:17:02.184Z,1351264622.184 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2012-10-26T15:17:02.203Z,1351264622.203 [RudderServo] Loaded
2012-10-26T15:17:02.203Z,1351264622.203 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2012-10-26T15:17:02.215Z,1351264622.215 [ThrusterServo] Loaded
2012-10-26T15:17:02.216Z,1351264622.216 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2012-10-26T15:17:02.216Z,1351264622.216 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2012-10-26T15:17:02.217Z,1351264622.217 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2012-10-26T15:17:02.263Z,1351264622.263 [DepthRateCalculator] Loaded
2012-10-26T15:17:02.264Z,1351264622.263 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2012-10-26T15:17:07.510Z,1351264627.510 [HFRadarModelCalc] Loaded
2012-10-26T15:17:07.510Z,1351264627.510 [ComponentRegistry](DEBUG): SyncComponent "HFRadarModelCalc" handled in the control thread.
2012-10-26T15:17:07.531Z,1351264627.532 [NavChart] Loaded
2012-10-26T15:17:07.532Z,1351264627.532 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2012-10-26T15:17:07.538Z,1351264627.538 [PitchRateCalculator] Loaded
2012-10-26T15:17:07.538Z,1351264627.538 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2012-10-26T15:17:07.545Z,1351264627.545 [SpeedCalculator] Loaded
2012-10-26T15:17:07.545Z,1351264627.545 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2012-10-26T15:17:07.565Z,1351264627.565 [TempGradientCalculator] Loaded
2012-10-26T15:17:07.565Z,1351264627.565 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2012-10-26T15:17:07.571Z,1351264627.571 [YawRateCalculator] Loaded
2012-10-26T15:17:07.572Z,1351264627.572 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2012-10-26T15:17:07.596Z,1351264627.596 [Navigation] Loaded
2012-10-26T15:17:07.596Z,1351264627.596 [ComponentRegistry](DEBUG): SyncComponent "Navigation" handled in the control thread.
2012-10-26T15:17:07.597Z,1351264627.597 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2012-10-26T15:17:07.598Z,1351264627.598 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2012-10-26T15:17:07.905Z,1351264627.905 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2012-10-26T15:17:07.906Z,1351264627.906 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2012-10-26T15:17:07.949Z,1351264627.949 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2012-10-26T15:17:07.950Z,1351264627.950 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2012-10-26T15:17:08.015Z,1351264628.016 [VerticalControl](DEBUG): Construct VerticalControl.
2012-10-26T15:17:08.066Z,1351264628.066 [VerticalControl] Loaded
2012-10-26T15:17:08.066Z,1351264628.066 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2012-10-26T15:17:08.067Z,1351264628.067 [HorizontalControl](DEBUG): Construct HorizontalControl.
2012-10-26T15:17:08.093Z,1351264628.093 [HorizontalControl] Loaded
2012-10-26T15:17:08.093Z,1351264628.093 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2012-10-26T15:17:08.094Z,1351264628.094 [SpeedControl](DEBUG): Construct SpeedControl.
2012-10-26T15:17:08.096Z,1351264628.096 [SpeedControl] Loaded
2012-10-26T15:17:08.096Z,1351264628.096 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2012-10-26T15:17:08.097Z,1351264628.097 [LoopControl](DEBUG): Construct LoopControl.
2012-10-26T15:17:08.098Z,1351264628.098 [LoopControl] Loaded
2012-10-26T15:17:08.098Z,1351264628.098 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2012-10-26T15:17:08.098Z,1351264628.099 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2012-10-26T15:17:08.099Z,1351264628.099 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2012-10-26T15:17:08.107Z,1351264628.107 [AsyncPiEstimator](DEBUG): Construct AsyncPiEstimator.
2012-10-26T15:17:08.112Z,1351264628.112 [AsyncPiEstimator] Loaded
2012-10-26T15:17:08.113Z,1351264628.113 [ComponentRegistry](DEBUG): Component "AsyncPiEstimator" handled in its own thread.
2012-10-26T15:17:08.114Z,1351264628.114 [AsyncPiEstimator ThreadHandler](DEBUG): Created PCaller Thread at 406724E0
2012-10-26T15:17:08.115Z,1351264628.115 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2012-10-26T15:17:08.116Z,1351264628.116 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2012-10-26T15:17:08.304Z,1351264628.304 [AHRS_sp3003D] Loaded
2012-10-26T15:17:08.304Z,1351264628.304 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2012-10-26T15:17:08.604Z,1351264628.604 [Batt_Ocean_Server] Loaded
2012-10-26T15:17:08.604Z,1351264628.604 [ComponentRegistry](DEBUG): SyncComponent "Batt_Ocean_Server" handled in the control thread.
2012-10-26T15:17:08.622Z,1351264628.622 [Depth_Keller] Loaded
2012-10-26T15:17:08.623Z,1351264628.622 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2012-10-26T15:17:08.628Z,1351264628.628 [DropWeight] Loaded
2012-10-26T15:17:08.629Z,1351264628.629 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2012-10-26T15:17:08.773Z,1351264628.773 [DVL_micro] Loaded
2012-10-26T15:17:08.773Z,1351264628.773 [ComponentRegistry](DEBUG): Component "DVL_micro" handled in its own thread.
2012-10-26T15:17:08.778Z,1351264628.778 [DVL_micro ThreadHandler](DEBUG): Created PCaller Thread at 406F34E0
2012-10-26T15:17:08.875Z,1351264628.875 [NAL9602] Loaded
2012-10-26T15:17:08.876Z,1351264628.876 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2012-10-26T15:17:08.938Z,1351264628.938 [Onboard] Loaded
2012-10-26T15:17:08.939Z,1351264628.939 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2012-10-26T15:17:08.946Z,1351264628.946 [Radio_Freewave] Loaded
2012-10-26T15:17:08.946Z,1351264628.946 [ComponentRegistry](DEBUG): SyncComponent "Radio_Freewave" handled in the control thread.
2012-10-26T15:17:08.947Z,1351264628.947 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2012-10-26T15:17:08.948Z,1351264628.948 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2012-10-26T15:17:09.056Z,1351264629.056 [CTD_NeilBrown] Loaded
2012-10-26T15:17:09.056Z,1351264629.056 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2012-10-26T15:17:09.058Z,1351264629.058 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4074B4E0
2012-10-26T15:17:09.069Z,1351264629.069 [PAR_Licor] Loaded
2012-10-26T15:17:09.069Z,1351264629.069 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2012-10-26T15:17:09.090Z,1351264629.090 [Turbulence_NPS] Loaded
2012-10-26T15:17:09.090Z,1351264629.090 [ComponentRegistry](DEBUG): Component "Turbulence_NPS" handled in its own thread.
2012-10-26T15:17:09.094Z,1351264629.094 [Turbulence_NPS ThreadHandler](DEBUG): Created PCaller Thread at 4077B4E0
2012-10-26T15:17:09.129Z,1351264629.129 [WetLabsBB2FL] Loaded
2012-10-26T15:17:09.130Z,1351264629.130 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2012-10-26T15:17:09.134Z,1351264629.134 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 407AB4E0
2012-10-26T15:17:09.135Z,1351264629.135 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2012-10-26T15:17:09.137Z,1351264629.137 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2012-10-26T15:17:09.138Z,1351264629.138 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2012-10-26T15:17:09.149Z,1351264629.149 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2012-10-26T15:17:09.150Z,1351264629.150 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 407DB4E0
2012-10-26T15:17:09.155Z,1351264629.155 [Supervisor](DEBUG): Running supervisor.
2012-10-26T15:17:09.156Z,1351264629.156 [CommandLine](INFO): Thread ID is 749
2012-10-26T15:17:09.159Z,1351264629.159 [controlThread](INFO): Thread ID is 748
2012-10-26T15:17:09.159Z,1351264629.159 [controlThread](DEBUG): Initializing ControlThread
2012-10-26T15:17:09.160Z,1351264629.159 [CycleStarter](INFO): Thread ID is 747
2012-10-26T15:17:09.160Z,1351264629.160 [InternalSim](DEBUG):  InternalSim initializing...
2012-10-26T15:17:09.267Z,1351264629.267 [AsyncPiEstimator](INFO): Thread ID is 815
2012-10-26T15:17:09.267Z,1351264629.267 [AsyncPiEstimator](DEBUG): Initialize AsyncPiEstimator.
2012-10-26T15:17:09.336Z,1351264629.336 [DVL_micro](INFO): Thread ID is 816
2012-10-26T15:17:09.420Z,1351264629.420 [CTD_NeilBrown](INFO): Thread ID is 817
2012-10-26T15:17:09.421Z,1351264629.421 [CTD_NeilBrown](DEBUG): Initializing CTD_NeilBrown.
2012-10-26T15:17:09.427Z,1351264629.427 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2012-10-26T15:17:09.451Z,1351264629.451 [DVL_micro](INFO): Initializing
2012-10-26T15:17:09.451Z,1351264629.451 [DVL_micro](INFO): start:Powering up
2012-10-26T15:17:09.452Z,1351264629.452 [DVL_micro](INFO): Opening uart, block timeout 10ths=20
2012-10-26T15:17:09.453Z,1351264629.453 [DVL_micro](INFO): Cycling power to configure device.
2012-10-26T15:17:09.475Z,1351264629.475 [Turbulence_NPS](INFO): Thread ID is 818
2012-10-26T15:17:09.476Z,1351264629.476 [WetLabsBB2FL](INFO): Thread ID is 819
2012-10-26T15:17:09.477Z,1351264629.477 [Turbulence_NPS](DEBUG): Initializing Turbulence_NPS.
2012-10-26T15:17:09.478Z,1351264629.478 [Turbulence_NPS](INFO): Opening uart, block timeout 10ths=1
2012-10-26T15:17:09.484Z,1351264629.484 [WetLabsBB2FL](INFO): Powering down
2012-10-26T15:17:09.505Z,1351264629.505 [SBIT](INFO): Initialize SBIT Component.
2012-10-26T15:17:09.506Z,1351264629.506 [SBIT](IMPORTANT): Tethys CM Info:
$Rev: 10014
2012-10-26T15:17:09.515Z,1351264629.515 [NavChartDb](INFO): Thread ID is 820
2012-10-26T15:17:09.516Z,1351264629.516 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2012-10-26T15:17:09.519Z,1351264629.519 [IBIT](INFO): Initialize IBIT Component.
2012-10-26T15:17:09.520Z,1351264629.520 [CBIT](DEBUG): Initialize CBIT Component.
2012-10-26T15:17:09.520Z,1351264629.520 [CBIT](CRITICAL): LAST REBOOT DUE TO WATCHDOG TIMER RESET.
2012-10-26T15:17:09.579Z,1351264629.579 [Turbulence_NPS](INFO): Pause powering down
2012-10-26T15:17:09.587Z,1351264629.588 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2012-10-26T15:17:09.588Z,1351264629.588 [NavChart](DEBUG): Initialize NavChart Derivation.
2012-10-26T15:17:09.589Z,1351264629.589 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2012-10-26T15:17:09.589Z,1351264629.589 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2012-10-26T15:17:09.589Z,1351264629.589 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2012-10-26T15:17:09.591Z,1351264629.591 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2012-10-26T15:17:09.591Z,1351264629.591 [Navigation](DEBUG): Initializing Navigation.
2012-10-26T15:17:09.591Z,1351264629.591 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2012-10-26T15:17:09.593Z,1351264629.593 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2012-10-26T15:17:09.594Z,1351264629.594 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2012-10-26T15:17:09.595Z,1351264629.595 [LoopControl](DEBUG): Initialize LoopControlComponent.
2012-10-26T15:17:09.637Z,1351264629.637 [NavChartDb](IMPORTANT): Will load Electronic Nav Chart data from US5CA50M.000
2012-10-26T15:17:09.671Z,1351264629.671 [NavChartDb](IMPORTANT): Will load Electronic Nav Chart data from US2WC11M.000
2012-10-26T15:17:09.673Z,1351264629.673 [NavChartDb](IMPORTANT): Will load Electronic Nav Chart data from US1WC07M.000
2012-10-26T15:17:09.733Z,1351264629.733 [NavChartDb](IMPORTANT): Will load Electronic Nav Chart data from US3CA52M.000
2012-10-26T15:17:09.777Z,1351264629.777 [NavChartDb](INFO): Setup scan of Resources/US5CA50M.000
2012-10-26T15:17:11.213Z,1351264631.213 [Batt_Ocean_Server](ERROR): Batt_Ocean_Server A initialization uart error: serial timeout
2012-10-26T15:17:11.213Z,1351264631.213 [Batt_Ocean_Server](ERROR): Ocean Server Batteries failed to initialize. Re-initializing
2012-10-26T15:17:11.213Z,1351264631.213 [Batt_Ocean_Server] Communications Fault, FailCount= 1
2012-10-26T15:17:11.213Z,1351264631.214 [Batt_Ocean_Server](ERROR): Communications Fault
2012-10-26T15:17:11.239Z,1351264631.239 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2012-10-26T15:17:11.259Z,1351264631.259 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2012-10-26T15:17:11.269Z,1351264631.269 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://aosn.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://aosn.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://aosn.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://aosn.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://aosn.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface RunIn="Progression"/>

    <Aggregate Id="StartupSatComms" >

        <ReadDatum>
            <Timeout Duration="P1M" /><Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" /><Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2012-10-26T15:17:11.270Z,1351264631.270 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2012-10-26T15:17:11.308Z,1351264631.308 [MissionManager](INFO): DefineArg Default.NeedGPS = 1 bool
2012-10-26T15:17:11.310Z,1351264631.310 [Default:GPS:A.SetSpeed](DEBUG): Construct.
2012-10-26T15:17:11.313Z,1351264631.313 [Default:GPS:B.GoToSurface](DEBUG): Construct GoToSurface.
2012-10-26T15:17:11.326Z,1351264631.326 [Default:Iridium:A.SetSpeed](DEBUG): Construct.
2012-10-26T15:17:11.329Z,1351264631.329 [Default:Iridium:B.GoToSurface](DEBUG): Construct GoToSurface.
2012-10-26T15:17:11.336Z,1351264631.336 [Default:Iridium:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2012-10-26T15:17:11.345Z,1351264631.345 [Default:D.SetSpeed](DEBUG): Construct.
2012-10-26T15:17:11.348Z,1351264631.348 [Default:E.GoToSurface](DEBUG): Construct GoToSurface.
2012-10-26T15:17:11.353Z,1351264631.353 [Default:F.Wait](DEBUG): Construct Wait.
2012-10-26T15:17:11.357Z,1351264631.357 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Control="Tethys/Control"
xmlns:Guidance="Tethys/Guidance" 
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://aosn.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Control http://aosn.mbari.org/tethys/Xml/Control.xsd
Tethys/Guidance http://aosn.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://aosn.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://aosn.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="NeedGPS"><True/></DefineArg>

    <Aggregate Id="GPS" >

        <When><Arg Name="NeedGPS"/>
        </When>

<!-- Run at high speed -->

        <Guidance:SetSpeed RunIn="Parallel">
            <Setting><Guidance:SetSpeed.period/><Units:millisecond/><Value>400</Value></Setting>
        </Guidance:SetSpeed>

<!-- Get to the surface -->

        <Guidance:GoToSurface RunIn="Sequence"/>

<!-- Get GPS fix -->

        <ReadDatum Id="Read_GPS"><Universal:latitude_fix/>
        </ReadDatum>

        <Assign><Arg Name="NeedGPS"/><False/></Assign>

    </Aggregate>

    <Aggregate Id="Iridium" >

<!-- Run at high speed -->

        <Guidance:SetSpeed RunIn="Parallel">
            <Setting><Guidance:SetSpeed.period/><Units:millisecond/><Value>400</Value></Setting>
        </Guidance:SetSpeed>

<!-- Get to the surface -->

        <Guidance:GoToSurface RunIn="Sequence"/>

<!-- Do data comms -->

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute RunIn="Sequence">
                    <Setting>
                    <Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped drop weight due to communications timeout</Syslog>
            </Timeout><Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

    <Aggregate Id="CallIridium" >

        <When>
            <Elapsed><Universal:platform_communications/></Elapsed>
            <Gt><Units:minute/><Value>5.0</Value></Gt>
            <And><Universal:platform_conversation/><Eq><True/></Eq></And>
            <Or>
            <Elapsed><Universal:platform_communications/></Elapsed><Gt><Units:hour/><Value>1.0</Value></Gt></Or>
        </When>

        <Assign><Arg Name="NeedGPS"/><True/></Assign>

        <Call RefId="Iridium"/>

    </Aggregate>

<!-- Wait forever at the surface-->

<!-- Run at low speed -->

    <Guidance:SetSpeed RunIn="Parallel">
        <Setting><Guidance:SetSpeed.period/><Units:second/><Value>5</Value></Setting>
    </Guidance:SetSpeed>

    <Guidance:GoToSurface RunIn="Parallel"/>

    <Guidance:Wait RunIn="Sequence"></Guidance:Wait>

</Mission>


2012-10-26T15:17:11.361Z,1351264631.361 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,AHRS_sp3003D,Batt_Ocean_Server,Depth_Keller,DropWeight,NAL9602,Onboard,Radio_Freewave,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,HFRadarModelCalc,NavChart,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,Navigation,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,logger,
2012-10-26T15:17:11.387Z,1351264631.387 [AHRS_sp3003D](DEBUG): Initializing AHRS_sp3003D.
2012-10-26T15:17:11.535Z,1351264631.534 [DVL_micro](INFO): Opening uart, block timeout 10ths=20
2012-10-26T15:17:11.535Z,1351264631.535 [DVL_micro](INFO): Querying output modes
2012-10-26T15:17:11.535Z,1351264631.535 [DVL_micro](DEBUG): commandDVL: #&!LQNQ.COMD0606

2012-10-26T15:17:11.538Z,1351264631.538 [DVL_micro](DEBUG): cmdResponse: 01 03 16
2012-10-26T15:17:11.539Z,1351264631.539 [DVL_micro](INFO): NQ1 output enabled
2012-10-26T15:17:11.539Z,1351264631.539 [DVL_micro](INFO): RSSI output enabled
2012-10-26T15:17:11.539Z,1351264631.539 [DVL_micro](INFO): ADCP output enabled
2012-10-26T15:17:11.539Z,1351264631.539 [DVL_micro](DEBUG): commandDVL: #&!LQNQ.COMD2525

2012-10-26T15:17:11.841Z,1351264631.841 [DVL_micro](DEBUG): cmdResponse: AUTO_VEL_ON 
2012-10-26T15:17:11.846Z,1351264631.846 [DVL_micro](INFO): pause:Powering down
2012-10-26T15:17:11.859Z,1351264631.859 [Radio_Freewave](INFO): Powering up
2012-10-26T15:17:11.979Z,1351264631.979 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2012-10-26T15:17:11.983Z,1351264631.983 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2012-10-26T15:17:11.989Z,1351264631.989 [ElevatorServo](DEBUG): Initializing EZServoServo.
2012-10-26T15:17:11.990Z,1351264631.990 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2012-10-26T15:17:11.996Z,1351264631.996 [MassServo](DEBUG): Initializing EZServoServo.
2012-10-26T15:17:12.002Z,1351264632.002 [MassServo](DEBUG): Initializing MassServo.
2012-10-26T15:17:12.008Z,1351264632.008 [RudderServo](DEBUG): Initializing EZServoServo.
2012-10-26T15:17:12.009Z,1351264632.009 [RudderServo](DEBUG): Initializing RudderServo.
2012-10-26T15:17:12.015Z,1351264632.015 [ThrusterServo](DEBUG): Initializing EZServoServo.
2012-10-26T15:17:12.023Z,1351264632.023 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2012-10-26T15:17:12.039Z,1351264632.039 [CBIT](ERROR): Communications Fault in component: Batt_Ocean_Server
2012-10-26T15:17:12.039Z,1351264632.039 [CBIT](INFO): Clearing failed state for component Batt_Ocean_Server
2012-10-26T15:17:12.040Z,1351264632.039 [Batt_Ocean_Server] No Fault, FailCount= 1
2012-10-26T15:17:15.751Z,1351264635.751 [Batt_Ocean_Server](INFO): Ocean Server Batteries initialized
2012-10-26T15:17:15.765Z,1351264635.765 [NAL9602](INFO): Powering up NAL9602
2012-10-26T15:17:21.727Z,1351264641.727 [CommandLine](IMPORTANT): got command quit
2012-10-26T15:17:23.758Z,1351264643.758 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2012-10-26T15:17:23.758Z,1351264643.758 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2012-10-26T15:17:23.889Z,1351264643.889 [NavChartDb](INFO): # of records loaded: 0
2012-10-26T15:17:24.009Z,1351264644.009 [NavChartDb](IMPORTANT): Loaded Electronic Nav Chart data from US5CA50M.000
2012-10-26T15:17:24.018Z,1351264644.018 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2012-10-26T15:17:24.219Z,1351264644.219 [WetLabsBB2FL](INFO): Powering down
2012-10-26T15:17:24.238Z,1351264644.238 [ComponentRegistry](INFO): Shutting down Turbulence_NPS ThreadHandler
2012-10-26T15:17:24.615Z,1351264644.615 [Turbulence_NPS](INFO): Uninitialize Powering down
2012-10-26T15:17:24.618Z,1351264644.618 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler
2012-10-26T15:17:24.695Z,1351264644.695 [CTD_NeilBrown](INFO): Powering down
2012-10-26T15:17:24.700Z,1351264644.700 [ComponentRegistry](INFO): Shutting down DVL_micro ThreadHandler
2012-10-26T15:17:24.995Z,1351264644.995 [DVL_micro](INFO): uninitialize:Powering down
2012-10-26T15:17:25.011Z,1351264645.011 [ComponentRegistry](INFO): Shutting down AsyncPiEstimator ThreadHandler
2012-10-26T15:17:25.208Z,1351264645.208 [SBIT](IMPORTANT): Beginning Startup BIT
2012-10-26T15:17:25.213Z,1351264645.213 [CBIT](IMPORTANT): Beginning GF scan
2012-10-26T15:17:25.271Z,1351264645.271 [AsyncPiEstimator](DEBUG): Uninitialize AsyncPiEstimator.
2012-10-26T15:17:25.291Z,1351264645.291 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2012-10-26T15:17:25.299Z,1351264645.299 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2012-10-26T15:17:25.318Z,1351264645.318 [controlThread](DEBUG): Uninitializing ControlThread
2012-10-26T15:17:25.319Z,1351264645.319 [AHRS_sp3003D](INFO): Powering down
2012-10-26T15:17:25.407Z,1351264645.407 [NAL9602](INFO): Powering down
2012-10-26T15:17:25.426Z,1351264645.426 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2012-10-26T15:17:25.426Z,1351264645.426 [NavChart](DEBUG): Uninitialize NavChart Derivation.
2012-10-26T15:17:25.431Z,1351264645.431 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2012-10-26T15:17:25.431Z,1351264645.431 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2012-10-26T15:17:25.432Z,1351264645.432 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2012-10-26T15:17:25.432Z,1351264645.432 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2012-10-26T15:17:25.432Z,1351264645.432 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2012-10-26T15:17:25.433Z,1351264645.432 [BuoyancyServo](INFO): Powering down
2012-10-26T15:17:25.446Z,1351264645.446 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2012-10-26T15:17:25.446Z,1351264645.446 [ElevatorServo](INFO): Powering down
2012-10-26T15:17:25.465Z,1351264645.465 [MassServo](DEBUG): Uninitialize Mass Servo.
2012-10-26T15:17:25.465Z,1351264645.466 [MassServo](INFO): Powering down
2012-10-26T15:17:25.484Z,1351264645.484 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2012-10-26T15:17:25.484Z,1351264645.484 [RudderServo](INFO): Powering down
2012-10-26T15:17:25.485Z,1351264645.485 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2012-10-26T15:17:25.485Z,1351264645.485 [ThrusterServo](INFO): Powering down
2012-10-26T15:17:25.486Z,1351264645.486 [SBIT](DEBUG): Uninitialize SBIT Component.
2012-10-26T15:17:25.486Z,1351264645.487 [IBIT](DEBUG): Uninitialize IBIT Component.
2012-10-26T15:17:25.487Z,1351264645.487 [CBIT](DEBUG): Uninitialize CBIT Component.