2016-06-28T16:32:16.859Z,1467131536.859 [Supervisor](DEBUG): Initializing supervisor.
2016-06-28T16:32:16.864Z,1467131536.864 [SyncHandler](DEBUG): Created PCaller Thread at 4051A4E0
2016-06-28T16:32:16.864Z,1467131536.864 [SyncHandler](INFO): Protected caller Thread ID is 924
2016-06-28T16:32:16.865Z,1467131536.865 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2016-06-28T16:32:16.866Z,1467131536.866 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4054A4E0
2016-06-28T16:32:16.867Z,1467131536.867 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 925
2016-06-28T16:32:16.871Z,1467131536.871 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2016-06-28T16:32:16.884Z,1467131536.884 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2016-06-28T16:32:16.885Z,1467131536.885 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 4057A4E0
2016-06-28T16:32:16.885Z,1467131536.885 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 926
2016-06-28T16:32:16.886Z,1467131536.886 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2016-06-28T16:32:16.887Z,1467131536.887 [logger ThreadHandler](DEBUG): Created PCaller Thread at 405AA4E0
2016-06-28T16:32:16.887Z,1467131536.887 [logger ThreadHandler](INFO): Protected caller Thread ID is 927
2016-06-28T16:32:16.889Z,1467131536.889 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2016-06-28T16:32:16.890Z,1467131536.890 [Supervisor](INFO): Looking for Config files in directory: Config/
2016-06-28T16:32:16.893Z,1467131536.893 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2016-06-28T16:32:17.096Z,1467131537.096 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2016-06-28T16:32:17.537Z,1467131537.537 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2016-06-28T16:32:17.538Z,1467131537.538 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2016-06-28T16:32:17.666Z,1467131537.666 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2016-06-28T16:32:17.667Z,1467131537.667 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2016-06-28T16:32:17.863Z,1467131537.862 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2016-06-28T16:32:17.863Z,1467131537.863 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2016-06-28T16:32:17.968Z,1467131537.968 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2016-06-28T16:32:17.969Z,1467131537.969 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2016-06-28T16:32:18.154Z,1467131538.154 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2016-06-28T16:32:18.155Z,1467131538.155 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2016-06-28T16:32:18.652Z,1467131538.652 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2016-06-28T16:32:18.652Z,1467131538.652 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2016-06-28T16:32:18.944Z,1467131538.944 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2016-06-28T16:32:18.945Z,1467131538.945 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2016-06-28T16:32:19.033Z,1467131539.033 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2016-06-28T16:32:19.034Z,1467131539.034 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2016-06-28T16:32:19.169Z,1467131539.169 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2016-06-28T16:32:19.170Z,1467131539.170 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2016-06-28T16:32:19.382Z,1467131539.382 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2016-06-28T16:32:19.383Z,1467131539.383 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2016-06-28T16:32:19.834Z,1467131539.834 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2016-06-28T16:32:19.835Z,1467131539.835 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2016-06-28T16:32:20.206Z,1467131540.207 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2016-06-28T16:32:20.207Z,1467131540.207 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2016-06-28T16:32:20.530Z,1467131540.530 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2016-06-28T16:32:20.530Z,1467131540.530 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2016-06-28T16:32:20.644Z,1467131540.644 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2016-06-28T16:32:20.646Z,1467131540.646 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-ahi/
2016-06-28T16:32:20.649Z,1467131540.649 [Supervisor](INFO): Opening Config file at: Config/lrauv-ahi/Control.cfg
2016-06-28T16:32:20.752Z,1467131540.752 [Supervisor](INFO): Opening Config file at: Config/lrauv-ahi/Navigation.cfg
2016-06-28T16:32:20.850Z,1467131540.850 [Supervisor](INFO): Opening Config file at: Config/lrauv-ahi/secure.cfg
2016-06-28T16:32:20.939Z,1467131540.939 [Supervisor](INFO): Opening Config file at: Config/lrauv-ahi/BIT.cfg
2016-06-28T16:32:21.045Z,1467131541.046 [Supervisor](INFO): Opening Config file at: Config/lrauv-ahi/Simulator.cfg
2016-06-28T16:32:21.138Z,1467131541.138 [Supervisor](INFO): Opening Config file at: Config/lrauv-ahi/Science.cfg
2016-06-28T16:32:21.289Z,1467131541.289 [Supervisor](INFO): Opening Config file at: Config/lrauv-ahi/logger.cfg
2016-06-28T16:32:21.392Z,1467131541.392 [Supervisor](INFO): Opening Config file at: Config/lrauv-ahi/vehicle.cfg
2016-06-28T16:32:21.569Z,1467131541.569 [Supervisor](INFO): Opening Config file at: Config/lrauv-ahi/Battery.cfg
2016-06-28T16:32:21.808Z,1467131541.808 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2016-06-28T16:32:21.809Z,1467131541.809 [Supervisor](INFO): Opening Config file at: Config/lrauv-ahi/Sensor.cfg
2016-06-28T16:32:21.994Z,1467131541.994 [Supervisor](INFO): Opening Config file at: Config/lrauv-ahi/Servo.cfg
2016-06-28T16:32:22.106Z,1467131542.106 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-ahi/root/
2016-06-28T16:32:22.107Z,1467131542.107 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2016-06-28T16:32:22.109Z,1467131542.109 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2016-06-28T16:32:22.136Z,1467131542.136 [DepthRateCalculator] Loaded
2016-06-28T16:32:22.136Z,1467131542.136 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2016-06-28T16:32:22.143Z,1467131542.143 [PitchRateCalculator] Loaded
2016-06-28T16:32:22.143Z,1467131542.143 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2016-06-28T16:32:22.156Z,1467131542.156 [SpeedCalculator] Loaded
2016-06-28T16:32:22.156Z,1467131542.156 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2016-06-28T16:32:22.173Z,1467131542.173 [TempGradientCalculator] Loaded
2016-06-28T16:32:22.174Z,1467131542.174 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2016-06-28T16:32:22.191Z,1467131542.191 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2016-06-28T16:32:22.191Z,1467131542.191 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2016-06-28T16:32:22.197Z,1467131542.197 [YawRateCalculator] Loaded
2016-06-28T16:32:22.198Z,1467131542.197 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2016-06-28T16:32:22.198Z,1467131542.198 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2016-06-28T16:32:22.199Z,1467131542.198 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2016-06-28T16:32:22.308Z,1467131542.309 [DeadReckonUsingMultipleVelocitySources] Loaded
2016-06-28T16:32:22.309Z,1467131542.309 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2016-06-28T16:32:22.367Z,1467131542.367 [DeadReckonUsingSpeedCalculator] Loaded
2016-06-28T16:32:22.367Z,1467131542.367 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2016-06-28T16:32:22.386Z,1467131542.386 [NavChart] Loaded
2016-06-28T16:32:22.386Z,1467131542.386 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2016-06-28T16:32:22.390Z,1467131542.390 [UniversalFixResidualReporter] Loaded
2016-06-28T16:32:22.391Z,1467131542.391 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2016-06-28T16:32:22.391Z,1467131542.391 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2016-06-28T16:32:22.392Z,1467131542.392 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2016-06-28T16:32:22.503Z,1467131542.503 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2016-06-28T16:32:22.504Z,1467131542.504 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2016-06-28T16:32:22.531Z,1467131542.531 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2016-06-28T16:32:22.532Z,1467131542.532 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2016-06-28T16:32:22.539Z,1467131542.539 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2016-06-28T16:32:22.539Z,1467131542.539 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2016-06-28T16:32:22.804Z,1467131542.804 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2016-06-28T16:32:22.804Z,1467131542.804 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2016-06-28T16:32:22.943Z,1467131542.943 [SBIT](DEBUG): Construct Startup Built In Test.
2016-06-28T16:32:23.009Z,1467131543.009 [SBIT] Loaded
2016-06-28T16:32:23.010Z,1467131543.010 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2016-06-28T16:32:23.010Z,1467131543.010 [IBIT](DEBUG): Construct Initiated Built In Test.
2016-06-28T16:32:23.040Z,1467131543.040 [IBIT] Loaded
2016-06-28T16:32:23.041Z,1467131543.040 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2016-06-28T16:32:23.045Z,1467131543.045 [CBIT](DEBUG): Construct Continuous Built In Test.
2016-06-28T16:32:23.208Z,1467131543.208 [CBIT] Loaded
2016-06-28T16:32:23.208Z,1467131543.208 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2016-06-28T16:32:23.209Z,1467131543.209 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2016-06-28T16:32:23.209Z,1467131543.209 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2016-06-28T16:32:23.507Z,1467131543.507 [DataOverHttps] Loaded
2016-06-28T16:32:23.507Z,1467131543.507 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2016-06-28T16:32:23.535Z,1467131543.535 [Depth_Keller] Loaded
2016-06-28T16:32:23.535Z,1467131543.536 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2016-06-28T16:32:23.636Z,1467131543.636 [NAL9602] Loaded
2016-06-28T16:32:23.636Z,1467131543.636 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2016-06-28T16:32:23.646Z,1467131543.647 [Onboard] Loaded
2016-06-28T16:32:23.647Z,1467131543.647 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2016-06-28T16:32:23.655Z,1467131543.655 [Radio_Surface] Loaded
2016-06-28T16:32:23.655Z,1467131543.655 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2016-06-28T16:32:23.656Z,1467131543.656 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 409234E0
2016-06-28T16:32:23.656Z,1467131543.657 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 1006
2016-06-28T16:32:23.710Z,1467131543.710 [PNI_TCM] Loaded
2016-06-28T16:32:23.710Z,1467131543.710 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2016-06-28T16:32:23.824Z,1467131543.824 [Rowe_600LCM] Loaded
2016-06-28T16:32:23.825Z,1467131543.825 [ComponentRegistry](DEBUG): Component "Rowe_600LCM" handled in its own thread.
2016-06-28T16:32:23.826Z,1467131543.826 [Rowe_600LCM ThreadHandler](DEBUG): Created PCaller Thread at 409534E0
2016-06-28T16:32:23.826Z,1467131543.826 [Rowe_600LCM ThreadHandler](INFO): Protected caller Thread ID is 1007
2016-06-28T16:32:25.817Z,1467131545.817 [BPC1] Loaded
2016-06-28T16:32:25.817Z,1467131545.817 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2016-06-28T16:32:25.818Z,1467131545.818 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2016-06-28T16:32:25.818Z,1467131545.818 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2016-06-28T16:32:25.935Z,1467131545.935 [BuoyancyServo] Loaded
2016-06-28T16:32:25.936Z,1467131545.936 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2016-06-28T16:32:25.953Z,1467131545.953 [ElevatorServo] Loaded
2016-06-28T16:32:25.953Z,1467131545.953 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2016-06-28T16:32:25.969Z,1467131545.969 [MassServo] Loaded
2016-06-28T16:32:25.970Z,1467131545.970 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2016-06-28T16:32:25.987Z,1467131545.987 [RudderServo] Loaded
2016-06-28T16:32:25.987Z,1467131545.987 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2016-06-28T16:32:26.003Z,1467131546.003 [ThrusterServo] Loaded
2016-06-28T16:32:26.004Z,1467131546.003 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2016-06-28T16:32:26.004Z,1467131546.004 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2016-06-28T16:32:26.004Z,1467131546.004 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2016-06-28T16:32:26.060Z,1467131546.060 [VerticalControl](DEBUG): Construct VerticalControl.
2016-06-28T16:32:26.159Z,1467131546.159 [VerticalControl] Loaded
2016-06-28T16:32:26.159Z,1467131546.159 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2016-06-28T16:32:26.160Z,1467131546.160 [HorizontalControl](DEBUG): Construct HorizontalControl.
2016-06-28T16:32:26.225Z,1467131546.225 [HorizontalControl] Loaded
2016-06-28T16:32:26.226Z,1467131546.226 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2016-06-28T16:32:26.226Z,1467131546.226 [SpeedControl](DEBUG): Construct SpeedControl.
2016-06-28T16:32:26.228Z,1467131546.228 [SpeedControl] Loaded
2016-06-28T16:32:26.228Z,1467131546.228 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2016-06-28T16:32:26.229Z,1467131546.229 [LoopControl](DEBUG): Construct LoopControl.
2016-06-28T16:32:26.230Z,1467131546.230 [LoopControl] Loaded
2016-06-28T16:32:26.230Z,1467131546.230 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2016-06-28T16:32:26.230Z,1467131546.230 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2016-06-28T16:32:26.231Z,1467131546.231 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2016-06-28T16:32:26.318Z,1467131546.318 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2016-06-28T16:32:26.318Z,1467131546.318 [StratificationFrontDetector](DEBUG): (re)initializing
2016-06-28T16:32:26.318Z,1467131546.318 [StratificationFrontDetector] Loaded
2016-06-28T16:32:26.318Z,1467131546.318 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2016-06-28T16:32:26.319Z,1467131546.319 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2016-06-28T16:32:26.319Z,1467131546.319 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2016-06-28T16:32:26.444Z,1467131546.444 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2016-06-28T16:32:26.448Z,1467131546.448 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2016-06-28T16:32:26.449Z,1467131546.449 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2016-06-28T16:32:26.456Z,1467131546.456 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2016-06-28T16:32:26.457Z,1467131546.457 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A5D4E0
2016-06-28T16:32:26.458Z,1467131546.457 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 1008
2016-06-28T16:32:26.463Z,1467131546.463 [Supervisor](INFO): Main Thread ID is 765
2016-06-28T16:32:26.463Z,1467131546.463 [Supervisor](DEBUG): Running supervisor.
2016-06-28T16:32:26.464Z,1467131546.464 [CommandLine ThreadHandler](INFO): Handler Thread ID is 1009
2016-06-28T16:32:26.467Z,1467131546.467 [controlThread ThreadHandler](INFO): Handler Thread ID is 1010
2016-06-28T16:32:26.467Z,1467131546.467 [controlThread](DEBUG): Initializing ControlThread
2016-06-28T16:32:26.468Z,1467131546.468 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2016-06-28T16:32:26.468Z,1467131546.468 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2016-06-28T16:32:26.469Z,1467131546.469 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2016-06-28T16:32:26.469Z,1467131546.469 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2016-06-28T16:32:26.470Z,1467131546.470 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2016-06-28T16:32:26.470Z,1467131546.470 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2016-06-28T16:32:26.471Z,1467131546.471 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2016-06-28T16:32:26.472Z,1467131546.472 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2016-06-28T16:32:26.472Z,1467131546.472 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2016-06-28T16:32:26.473Z,1467131546.473 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2016-06-28T16:32:26.473Z,1467131546.473 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2016-06-28T16:32:26.473Z,1467131546.473 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2016-06-28T16:32:26.474Z,1467131546.474 [NavChart](DEBUG): Initialize NavChart Navigation.
2016-06-28T16:32:26.474Z,1467131546.474 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2016-06-28T16:32:26.475Z,1467131546.475 [SBIT](INFO): Initialize SBIT Component.
2016-06-28T16:32:26.475Z,1467131546.475 [SBIT](IMPORTANT): git: 2015-12-17-108-g5bef090
2016-06-28T16:32:26.475Z,1467131546.475 [SBIT](INFO): git hash: 5bef0906e748577e5d4ac431bf22a986aa172b48
2016-06-28T16:32:26.477Z,1467131546.477 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.27.8
Kernel Reported: 2.6.27.8-00011-g2bc81df-dirty
2016-06-28T16:32:26.477Z,1467131546.477 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
Kernel Reported: #646 PREEMPT Thu Feb 11 17:01:12 PST 2016
2016-06-28T16:32:26.478Z,1467131546.478 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2016-06-28T16:32:26.479Z,1467131546.479 [IBIT](INFO): Initialize IBIT Component.
2016-06-28T16:32:26.480Z,1467131546.480 [CBIT](DEBUG): Initialize CBIT Component.
2016-06-28T16:32:26.480Z,1467131546.480 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2016-06-28T16:32:26.481Z,1467131546.481 [logger ThreadHandler](INFO): Handler Thread ID is 1011
2016-06-28T16:32:26.508Z,1467131546.508 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 1012
2016-06-28T16:32:26.514Z,1467131546.514 [Radio_Surface](INFO): Powering up
2016-06-28T16:32:26.531Z,1467131546.532 [Rowe_600LCM ThreadHandler](INFO): Handler Thread ID is 1013
2016-06-28T16:32:26.532Z,1467131546.532 [Rowe_600LCM](INFO): Initializing
2016-06-28T16:32:26.533Z,1467131546.533 [Rowe_600LCM](INFO): Checking LCM
2016-06-28T16:32:26.533Z,1467131546.533 [Rowe_600LCM](INFO): LCM OK
2016-06-28T16:32:26.533Z,1467131546.533 [Rowe_600LCM](INFO): Powering up
2016-06-28T16:32:26.552Z,1467131546.552 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 1014
2016-06-28T16:32:26.570Z,1467131546.570 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2016-06-28T16:32:26.572Z,1467131546.572 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2016-06-28T16:32:26.572Z,1467131546.572 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2016-06-28T16:32:26.573Z,1467131546.573 [LoopControl](DEBUG): Initialize LoopControlComponent.
2016-06-28T16:32:26.574Z,1467131546.574 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2016-06-28T16:32:29.825Z,1467131549.825 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources/ElectronicNavigationCharts
2016-06-28T16:32:29.840Z,1467131549.840 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2016-06-28T16:32:29.846Z,1467131549.846 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2016-06-28T16:32:29.846Z,1467131549.846 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2MI01M.000
2016-06-28T16:32:29.847Z,1467131549.847 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2MI80M.000
2016-06-28T16:32:29.847Z,1467131549.847 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2016-06-28T16:32:29.847Z,1467131549.847 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2016-06-28T16:32:29.848Z,1467131549.848 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2016-06-28T16:32:29.848Z,1467131549.848 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4IN01M.000
2016-06-28T16:32:29.848Z,1467131549.848 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4MI56M.000
2016-06-28T16:32:29.848Z,1467131549.848 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4MI57M.000
2016-06-28T16:32:29.849Z,1467131549.849 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4MI59M.000
2016-06-28T16:32:29.849Z,1467131549.849 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4MI89M.000
2016-06-28T16:32:29.849Z,1467131549.849 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4MI90M.000
2016-06-28T16:32:29.849Z,1467131549.849 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4WI03M.000
2016-06-28T16:32:29.849Z,1467131549.849 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4WI06M.000
2016-06-28T16:32:29.850Z,1467131549.850 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4WI33M.000
2016-06-28T16:32:29.850Z,1467131549.850 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4WI34M.000
2016-06-28T16:32:29.850Z,1467131549.850 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2016-06-28T16:32:29.850Z,1467131549.850 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2016-06-28T16:32:29.850Z,1467131549.851 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2016-06-28T16:32:29.851Z,1467131549.851 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2016-06-28T16:32:29.901Z,1467131549.901 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2016-06-28T16:32:29.902Z,1467131549.902 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2016-06-28T16:32:30.721Z,1467131550.721 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface
2016-06-28T16:32:30.818Z,1467131550.818 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:./bin/roweadcp -dev /dev/ttyB4 -b 38400 >& /dev/null &
2016-06-28T16:32:30.878Z,1467131550.878 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track
2016-06-28T16:32:30.879Z,1467131550.879 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity
2016-06-28T16:32:31.900Z,1467131551.900 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2016-06-28T16:32:31.901Z,1467131551.901 [Default:A.Wait](DEBUG): Construct Wait.
2016-06-28T16:32:31.919Z,1467131551.919 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2016-06-28T16:32:31.947Z,1467131551.947 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2016-06-28T16:32:31.950Z,1467131551.950 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2016-06-28T16:32:31.976Z,1467131551.976 [Default:E.Execute](DEBUG): Construct Execute.
2016-06-28T16:32:31.989Z,1467131551.990 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Sequence/>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2016-06-28T16:32:32.011Z,1467131552.011 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,NAL9602,Onboard,PNI_TCM,BPC1,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2016-06-28T16:32:32.062Z,1467131552.062 [NAL9602](INFO): Powering up NAL9602
2016-06-28T16:32:32.372Z,1467131552.372 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:32.397Z,1467131552.397 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:32.508Z,1467131552.508 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2016-06-28T16:32:32.515Z,1467131552.515 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2016-06-28T16:32:32.538Z,1467131552.538 [ElevatorServo](DEBUG): Initializing EZServoServo.
2016-06-28T16:32:32.543Z,1467131552.543 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2016-06-28T16:32:32.557Z,1467131552.557 [MassServo](DEBUG): Initializing EZServoServo.
2016-06-28T16:32:32.563Z,1467131552.563 [MassServo](DEBUG): Initializing MassServo.
2016-06-28T16:32:32.569Z,1467131552.569 [RudderServo](DEBUG): Initializing EZServoServo.
2016-06-28T16:32:32.575Z,1467131552.575 [RudderServo](DEBUG): Initializing RudderServo.
2016-06-28T16:32:32.581Z,1467131552.581 [ThrusterServo](DEBUG): Initializing EZServoServo.
2016-06-28T16:32:32.587Z,1467131552.587 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2016-06-28T16:32:32.888Z,1467131552.888 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:32.890Z,1467131552.890 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:33.111Z,1467131553.111 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:33.112Z,1467131553.112 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:33.618Z,1467131553.618 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:33.619Z,1467131553.619 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:34.063Z,1467131554.063 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:34.071Z,1467131554.071 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:34.367Z,1467131554.367 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:34.368Z,1467131554.368 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:34.767Z,1467131554.767 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:34.768Z,1467131554.768 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16:32:35.180Z,1467131555.180 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-28T16