INFO 2025-10-21 20:37:17,026 process.py process_mission():429 [1] commandline = /src/data/process_i2map.py -v --noinput --start_year 2024 --end_year 2024 --start_yd 235 --end_yd 365 --num_cores 1 --clobber INFO 2025-10-21 20:37:17,026 process.py process_mission():449 [1] Processing i2map mission 2024.242.01 by user docker_user on host c10f68273022 INFO 2025-10-21 20:37:17,026 process.py download_process():165 [1] Download and processing steps for 2024.242.01 INFO 2025-10-21 20:37:17,027 logs2netcdfs.py download_process_logs():739 [1] src_dir = /Volumes/M3/master/i2MAP/2024/08/20240830/2024.242.01 INFO 2025-10-21 20:37:17,028 logs2netcdfs.py download_process_logs():768 [1] Rsyncing /Volumes/M3/master/i2MAP/2024/08/20240830/2024.242.01 to /data/auv_data/i2map/missionlogs/2024.242.01 INFO 2025-10-21 20:37:19,324 logs2netcdfs.py download_process_logs():779 [1] Processing mission: i2map 2024.242.01 INFO 2025-10-21 20:37:19,325 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2024.242.01/gps.log (477428 bytes) INFO 2025-10-21 20:37:19,385 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2024.242.01/navigation.log (141286884 bytes) INFO 2025-10-21 20:37:30,366 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2024.242.01/parosci.log (34806662 bytes) INFO 2025-10-21 20:37:33,129 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/i2map/missionlogs/2024.242.01/parosci.log: [ 13996 13997 342359] INFO 2025-10-21 20:37:33,230 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2024.242.01/seabird25p.log (69882010 bytes) INFO 2025-10-21 20:37:37,933 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/i2map/missionlogs/2024.242.01/seabird25p.log: [ 3824 64582] INFO 2025-10-21 20:37:38,195 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2024.242.01/tailCone.log (17488407 bytes) INFO 2025-10-21 20:37:40,419 logs2netcdfs.py download_process_logs():807 [1] Time to process: 21.09 seconds INFO 2025-10-21 20:37:40,420 process.py calibrate():227 [1] Calibration steps for 2024.242.01 INFO 2025-10-21 20:37:40,875 calibrate.py _nudge_pos():1680 [1] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-10-21 20:37:40,877 calibrate.py _nudge_pos():1711 [1] - - - 0 0.00 - - - INFO 2025-10-21 20:37:42,409 calibrate.py _nudge_pos():1806 [1] 183: 0.120 0.0025629 0.0023650 13771 45.90 8.286 9.547 2024-08-29T22:32:19.988089600 INFO 2025-10-21 20:37:44,962 calibrate.py _nudge_pos():1806 [1] 429: 0.140 0.0039744 0.0023880 13946 46.48 12.690 9.519 2024-08-29T23:22:54.190232576 INFO 2025-10-21 20:37:47,036 calibrate.py _nudge_pos():1806 [1] 624: 0.140 0.0014174 0.0032231 13981 46.60 4.515 12.816 2024-08-30T00:12:44.395389440 INFO 2025-10-21 20:37:49,892 calibrate.py _nudge_pos():1806 [1] 893: 0.170 0.0006003 0.0009994 13980 46.60 1.912 3.974 2024-08-30T01:03:49.595408896 INFO 2025-10-21 20:37:52,243 calibrate.py _nudge_pos():1806 [1] 1118: 0.170 0.0007842 0.0011111 14030 46.76 2.490 4.403 2024-08-30T01:54:19.787826176 INFO 2025-10-21 20:37:54,660 calibrate.py _nudge_pos():1806 [1] 1346: 0.200 0.0018648 0.0010583 13955 46.51 5.954 4.216 2024-08-30T02:44:37.991065344 INFO 2025-10-21 20:37:56,855 calibrate.py _nudge_pos():1806 [1] 1552: 0.020 0.0015172 0.0002637 13921 46.40 4.857 1.053 2024-08-30T03:34:27.386277632 INFO 2025-10-21 20:37:58,881 calibrate.py _nudge_pos():1806 [1] 1736: 0.180 0.0011176 0.0008616 16751 55.83 2.973 2.859 2024-08-30T04:33:20.594236416 INFO 2025-10-21 20:38:01,022 calibrate.py _nudge_pos():1806 [1] 1931: 0.110 -0.0018421 0.0022700 13991 46.63 -5.869 9.020 2024-08-30T05:23:12.789256960 INFO 2025-10-21 20:38:03,147 calibrate.py _nudge_pos():1806 [1] 2117: 0.130 -0.0002719 0.0008856 3100 10.33 -3.911 15.886 2024-08-30T05:36:37.794110208 INFO 2025-10-21 20:38:11,183 calibrate.py _nudge_pos():1806 [1] 2836: 0.150 0.0009686 0.0073517 39218 130.72 1.101 10.421 2024-08-30T07:59:19.387601152 INFO 2025-10-21 20:38:13,945 calibrate.py _nudge_pos():1806 [1] 3079: 0.060 0.0012639 0.0005310 5811 19.37 9.696 5.081 2024-08-30T08:22:43.591406592 INFO 2025-10-21 20:38:14,105 calibrate.py _nudge_pos():1806 [1] 3093: 0.110 0.0032079 0.0023967 44088 146.96 3.243 3.022 2024-08-30T10:49:54.186469376 INFO 2025-10-21 20:38:22,243 calibrate.py _nudge_pos():1806 [1] 3797: 0.140 -0.0008135 0.0043085 13901 46.33 -2.608 17.231 2024-08-30T11:47:58.387785216 INFO 2025-10-21 20:38:26,371 calibrate.py _nudge_pos():1806 [1] 4151: 0.160 0.0007514 0.0007690 13966 46.55 2.397 3.061 2024-08-30T12:40:24.592255232 INFO 2025-10-21 20:38:31,687 calibrate.py _nudge_pos():1806 [1] 4604: 0.020 0.0000072 -0.0007204 13971 46.57 0.023 -2.866 2024-08-30T13:34:30.989861888 INFO 2025-10-21 20:38:36,400 calibrate.py _nudge_pos():1806 [1] 5011: 0.040 -0.0007105 0.0012917 13996 46.65 -2.261 5.131 2024-08-30T14:27:56.190290688 INFO 2025-10-21 20:38:40,984 calibrate.py _nudge_pos():1806 [1] 5406: 0.070 0.0018668 0.0006972 13996 46.65 5.940 2.769 2024-08-30T15:21:09.391541504 INFO 2025-10-21 20:38:45,385 calibrate.py _nudge_pos():1806 [1] 5783: 0.090 0.0007480 -0.0007390 13951 46.50 2.387 -2.945 2024-08-30T16:13:55.594641664 INFO 2025-10-21 20:38:49,873 calibrate.py _nudge_pos():1806 [1] 6164: 0.130 0.0010234 0.0001126 13981 46.60 3.259 0.448 2024-08-30T17:06:51.787057664 INFO 2025-10-21 20:38:54,407 calibrate.py _nudge_pos():1806 [1] 6544: 0.150 0.0001851 0.0003893 13066 43.55 0.630 1.656 2024-08-30T17:56:43.992077312 INFO 2025-10-21 20:38:55,305 calibrate.py _nudge_pos():1862 [1] 6571: - - - 5 0.01 - - INFO 2025-10-21 20:38:55,305 calibrate.py _nudge_pos():1868 [1] Points in final series = 363649 INFO 2025-10-21 20:39:39,945 calibrate.py _read_oxy_coeffs():1189 [1] Looking for calibration file for O2 sensor serial number 2935 on port side INFO 2025-10-21 20:39:39,946 calibrate.py _read_oxy_coeffs():1219 [1] Executing: find "/Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files" -name "2935" INFO 2025-10-21 20:39:40,195 calibrate.py _read_oxy_coeffs():1238 [1] Found calibration date dirs: 2014_Nov 2021_Mar 2022_Apr WARNING 2025-10-21 20:39:40,200 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2014_Nov INFO 2025-10-21 20:39:40,200 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-21 20:39:40,205 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2021_Mar INFO 2025-10-21 20:39:40,205 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-21 20:39:40,209 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr INFO 2025-10-21 20:39:40,209 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} INFO 2025-10-21 20:39:40,216 calibrate.py _read_oxy_coeffs():1247 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml has CalibrationDate 2022-03-22 00:00:00+00:00 INFO 2025-10-21 20:39:40,216 calibrate.py _read_oxy_coeffs():1263 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml is just before 2024.242.01 with mission_start=2024-08-29T21:43:55.347071232 INFO 2025-10-21 20:39:50,669 calibrate.py _calibrated_oxygen():2513 [1] dissolvedO2_port: parsed from /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml file: {'Soc': 0.42595, 'offset': -0.5339, 'A': -0.0041113, 'B': 0.00020802, 'C': -3.0027e-06, 'D0': 2.5826, 'D1': 0.000192634, 'D2': -0.0464803, 'E': 0.036, 'Tau20': 1.09, 'H1': -0.033, 'H2': 5000.0, 'H3': 1450.0} INFO 2025-10-21 20:39:50,676 calibrate.py _read_oxy_coeffs():1189 [1] Looking for calibration file for O2 sensor serial number 3488 on stbd side INFO 2025-10-21 20:39:50,677 calibrate.py _read_oxy_coeffs():1219 [1] Executing: find "/Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files" -name "3488" INFO 2025-10-21 20:39:50,845 calibrate.py _read_oxy_coeffs():1238 [1] Found calibration date dirs: 2016_dec 2021_mar 2022_Jan WARNING 2025-10-21 20:39:50,848 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec INFO 2025-10-21 20:39:50,848 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-21 20:39:50,852 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2021_mar INFO 2025-10-21 20:39:50,852 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-21 20:39:50,856 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2022_Jan INFO 2025-10-21 20:39:50,856 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} INFO 2025-10-21 20:39:50,862 calibrate.py _read_oxy_coeffs():1247 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec/43-3488.xml has CalibrationDate 2016-12-16 00:00:00+00:00 INFO 2025-10-21 20:39:50,862 calibrate.py _read_oxy_coeffs():1263 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec/43-3488.xml is just before 2024.242.01 with mission_start=2024-08-29T21:43:55.347071232 INFO 2025-10-21 20:40:01,305 calibrate.py _calibrated_oxygen():2513 [1] dissolvedO2_stbd: parsed from /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec/43-3488.xml file: {'Soc': 0.44664, 'offset': -0.507, 'A': -0.0030812, 'B': 7.8442e-05, 'C': -9.0601e-07, 'D0': 2.5826, 'D1': 0.000192634, 'D2': -0.0464803, 'E': 0.036, 'Tau20': 1.44, 'H1': -0.033, 'H2': 5000.0, 'H3': 1450.0} INFO 2025-10-21 20:40:15,706 calibrate.py _geometric_depth_correction():3423 [1] seabird25p: d_beg_time_diff: 18 seconds, d_end_time_diff: 0 seconds INFO 2025-10-21 20:40:19,851 calibrate.py _geometric_depth_correction():3423 [1] seabird25p: d_beg_time_diff: 18 seconds, d_end_time_diff: 0 seconds INFO 2025-10-21 20:40:19,857 calibrate.py _ctd_process():2919 [1] Performing range checking of ['seabird25p_salinity'] in 2024.242.01/seabird25p.nc INFO 2025-10-21 20:40:19,860 calibrate.py _range_qc_combined_nc():898 [1] Setting 3 seabird25p_salinity values to NaN INFO 2025-10-21 20:40:19,860 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('seabird25p_salinity', Range(min=30, max=40))] INFO 2025-10-21 20:40:19,860 calibrate.py _range_qc_combined_nc():936 [1] Done range checking seabird25p INFO 2025-10-21 20:40:20,144 calibrate.py write_netcdf():3508 [1] Writing calibrated instrument data to /data/auv_data/i2map/missionnetcdfs/2024.242.01/i2map_2024.242.01_cal.nc INFO 2025-10-21 20:41:00,770 calibrate.py write_netcdf():3512 [1] Data variables written: depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, seabird25p_beam_transmittance, seabird25p_conductivity, seabird25p_conductivity_onboard, seabird25p_depth, seabird25p_dissolvedO2_port, seabird25p_dissolvedO2_stbd, seabird25p_oxygen_mll_port, seabird25p_oxygen_mll_stbd, seabird25p_oxygen_umolkg_port, seabird25p_oxygen_umolkg_stbd, seabird25p_salinity, seabird25p_salinity_onboard, seabird25p_temperature, seabird25p_temperature_onboard, seabird25p_time, tailcone_propRpm, tailcone_time, time INFO 2025-10-21 20:41:00,778 process.py align():251 [1] Alignment steps for 2024.242.01 INFO 2025-10-21 20:41:00,817 align.py process_cal():139 [1] Processing i2map_2024.242.01_cal.nc from /data/auv_data/i2map/missionnetcdfs/2024.242.01 INFO 2025-10-21 20:41:00,908 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-21 20:41:00,918 align.py process_cal():249 [1] navigation_roll: instrument_sample_rate_hz = 5.00 INFO 2025-10-21 20:41:01,146 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-21 20:41:01,158 align.py process_cal():249 [1] navigation_pitch: instrument_sample_rate_hz = 5.00 INFO 2025-10-21 20:41:01,397 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-21 20:41:01,409 align.py process_cal():249 [1] navigation_yaw: instrument_sample_rate_hz = 5.00 INFO 2025-10-21 20:41:01,543 align.py process_cal():161 [1] Skipping navigation_posx INFO 2025-10-21 20:41:01,543 align.py process_cal():161 [1] Skipping navigation_posy INFO 2025-10-21 20:41:01,639 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-21 20:41:01,651 align.py process_cal():249 [1] navigation_mWaterSpeed: instrument_sample_rate_hz = 5.00 INFO 2025-10-21 20:41:01,905 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:01,925 align.py process_cal():249 [1] seabird25p_temperature: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:02,245 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:02,268 align.py process_cal():249 [1] seabird25p_conductivity: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:02,588 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:02,609 align.py process_cal():249 [1] seabird25p_salinity: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:02,936 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:02,970 align.py process_cal():249 [1] seabird25p_temperature_onboard: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:03,320 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:03,340 align.py process_cal():249 [1] seabird25p_conductivity_onboard: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:03,663 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:03,690 align.py process_cal():249 [1] seabird25p_salinity_onboard: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:04,013 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:04,033 align.py process_cal():249 [1] seabird25p_dissolvedO2_port: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:04,356 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:04,375 align.py process_cal():249 [1] seabird25p_oxygen_mll_port: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:04,698 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:04,716 align.py process_cal():249 [1] seabird25p_oxygen_umolkg_port: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:05,034 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:05,053 align.py process_cal():249 [1] seabird25p_dissolvedO2_stbd: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:05,372 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:05,395 align.py process_cal():249 [1] seabird25p_oxygen_mll_stbd: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:05,718 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:05,736 align.py process_cal():249 [1] seabird25p_oxygen_umolkg_stbd: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:06,064 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:06,082 align.py process_cal():249 [1] seabird25p_beam_transmittance: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:06,403 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2024.242.01_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-21 20:41:06,420 align.py process_cal():249 [1] seabird25p_depth: instrument_sample_rate_hz = 7.99 INFO 2025-10-21 20:41:06,771 align.py process_cal():249 [1] tailcone_propRpm: instrument_sample_rate_hz = 5.00 INFO 2025-10-21 20:41:06,919 align.py write_netcdf():337 [1] Writing aligned data to /data/auv_data/i2map/missionnetcdfs/2024.242.01/i2map_2024.242.01_align.nc INFO 2025-10-21 20:41:07,058 align.py write_netcdf():342 [1] Data variables written: navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, seabird25p_beam_transmittance, seabird25p_conductivity, seabird25p_conductivity_onboard, seabird25p_depth, seabird25p_dissolvedO2_port, seabird25p_dissolvedO2_stbd, seabird25p_latitude, seabird25p_longitude, seabird25p_oxygen_mll_port, seabird25p_oxygen_mll_stbd, seabird25p_oxygen_umolkg_port, seabird25p_oxygen_umolkg_stbd, seabird25p_salinity, seabird25p_salinity_onboard, seabird25p_temperature, seabird25p_temperature_onboard, seabird25p_time, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-10-21 20:41:07,061 process.py resample():273 [1] Resampling steps for 2024.242.01 INFO 2025-10-21 20:41:07,062 resample.py resample_mission():1185 [1] Using depth_threshold = 10.00 m INFO 2025-10-21 20:41:07,087 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/i2map/missionnetcdfs/2024.242.01/i2map_2024.242.01_align.nc mission netCDF file INFO 2025-10-21 20:41:07,095 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/i2map/missionnetcdfs/2024.242.01/i2map_2024.242.01_align.nc mission netCDF file INFO 2025-10-21 20:41:07,098 resample.py get_mission_start_end():1145 [1] navigation: 2024-08-29T21:44:12.625887488 to 2024-08-30T17:57:58.986939904 (0 days 00:00:00.069995264 before mission_end) INFO 2025-10-21 20:41:07,103 resample.py get_mission_start_end():1145 [1] seabird25p: 2024-08-29T21:43:55.347071232 to 2024-08-30T17:57:58.996939264 (0 days 00:00:00.059995904 before mission_end) INFO 2025-10-21 20:41:07,107 resample.py get_mission_start_end():1145 [1] tailcone : 2024-08-29T21:43:32.458639104 to 2024-08-30T17:57:59.056935168 (0 days 00:00:00 before mission_end) INFO 2025-10-21 20:41:07,108 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/i2map/missionnetcdfs/2024.242.01/i2map_2024.242.01_align.nc mission netCDF file INFO 2025-10-21 20:41:07,109 resample.py resample_coordinates():249 [1] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:08,078 resample.py resample_variable():1031 [1] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:08,192 resample.py resample_variable():1031 [1] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:08,305 resample.py resample_variable():1031 [1] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:08,414 resample.py resample_variable():1031 [1] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:08,580 resample.py resample_variable():1031 [1] Resampling seabird25p_temperature with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:08,750 resample.py resample_variable():1031 [1] Resampling seabird25p_conductivity with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:08,926 resample.py resample_variable():1031 [1] Resampling seabird25p_salinity with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:09,103 resample.py resample_variable():1031 [1] Resampling seabird25p_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:09,285 resample.py resample_variable():1031 [1] Resampling seabird25p_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:09,472 resample.py resample_variable():1031 [1] Resampling seabird25p_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:09,657 resample.py resample_variable():1031 [1] Resampling seabird25p_dissolvedO2_port with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:09,846 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_mll_port with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:10,033 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_umolkg_port with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:10,218 resample.py resample_variable():1031 [1] Resampling seabird25p_dissolvedO2_stbd with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:10,406 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_mll_stbd with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:10,593 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_umolkg_stbd with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:10,779 resample.py resample_variable():1031 [1] Resampling seabird25p_beam_transmittance with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:10,897 resample.py resample_variable():1031 [1] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-10-21 20:41:11,362 resample.py resample_mission():1297 [1] Saved resampled mission to /data/auv_data/i2map/missionnetcdfs/2024.242.01/i2map_2024.242.01_1S.nc INFO 2025-10-21 20:41:11,366 process.py archive():337 [1] Archiving steps for 2024.242.01 INFO 2025-10-21 20:41:11,366 process.py archive():347 [1] nc_file_base = /data/auv_data/i2map/missionnetcdfs/2024.242.01/i2map_2024.242.01, BASE_PATH = /data/auv_data INFO 2025-10-21 20:41:11,406 archive.py copy_to_AUVTCD():60 [1] Archiving /data/auv_data/i2map/missionnetcdfs/2024.242.01/i2map_2024.242.01 files to /Volumes/AUVCTD/surveys/2024/netcdf INFO 2025-10-21 20:41:11,407 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2024/netcdf/i2map_2024.242.01_1S.nc INFO 2025-10-21 20:41:11,449 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2024.242.01/i2map_2024.242.01_1S.nc /Volumes/AUVCTD/surveys/2024/netcdf done. INFO 2025-10-21 20:41:11,450 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2024/netcdf/i2map_2024.242.01_cal.nc INFO 2025-10-21 20:41:11,758 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2024.242.01/i2map_2024.242.01_cal.nc /Volumes/AUVCTD/surveys/2024/netcdf done. INFO 2025-10-21 20:41:11,760 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2024/netcdf/i2map_2024.242.01_align.nc INFO 2025-10-21 20:41:12,030 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2024.242.01/i2map_2024.242.01_align.nc /Volumes/AUVCTD/surveys/2024/netcdf done. INFO 2025-10-21 20:41:12,042 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2024.242.01/gps.nc /Volumes/AUVCTD/missionnetcdfs/2024/2024242/2024.242.01 done. INFO 2025-10-21 20:41:12,418 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2024.242.01/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2024/2024242/2024.242.01 done. INFO 2025-10-21 20:41:12,517 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2024.242.01/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2024/2024242/2024.242.01 done. INFO 2025-10-21 20:41:12,708 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2024.242.01/seabird25p.nc /Volumes/AUVCTD/missionnetcdfs/2024/2024242/2024.242.01 done. INFO 2025-10-21 20:41:12,780 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2024.242.01/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2024/2024242/2024.242.01 done. INFO 2025-10-21 20:41:12,780 archive.py copy_to_AUVTCD():116 [1] Archiving product files INFO 2025-10-21 20:41:12,780 archive.py copy_to_AUVTCD():161 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2024.242.01/i2map_2024.242.01_processing.log /Volumes/AUVCTD/surveys/2024/netcdf