INFO 2025-06-26 15:48:16,014 process.py process_mission():429 [1] commandline = src/data/process_dorado.py --start_year 2005 --end_year 2014 --num_cores 1 -v --noinput --clobber INFO 2025-06-26 15:48:16,014 process.py process_mission():434 [1] dorado_info[mission]["comment"] = ESP drifter missions out at station 67-70 with Flyer doing casts and ESP drifting south toward Davidson Seamount - no gulpers (Frederic sent me note about survey grouping) Faulty parosci lead to several mission depth aborts at beginning of this set of volume surveys - ctdToUse = ctd1 INFO 2025-06-26 15:48:16,014 process.py process_mission():449 [1] Processing AUVCTD mission 2010.257.08 by user docker_user on host eae60d30a712 INFO 2025-06-26 15:48:16,014 process.py download_process():165 [1] Download and processing steps for 2010.257.08 INFO 2025-06-26 15:48:16,014 logs2netcdfs.py download_process_logs():739 [1] src_dir = /Volumes/AUVCTD/missionlogs/2010/2010257/2010.257.08 INFO 2025-06-26 15:48:16,014 logs2netcdfs.py download_process_logs():768 [1] Rsyncing /Volumes/AUVCTD/missionlogs/2010/2010257/2010.257.08 to /data/auv_data/dorado/missionlogs/2010.257.08 INFO 2025-06-26 15:48:16,413 logs2netcdfs.py download_process_logs():779 [1] Processing mission: dorado 2010.257.08 INFO 2025-06-26 15:48:16,413 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.08/ctdDriver.log (19019 bytes) INFO 2025-06-26 15:48:16,422 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.08/ctdDriver2.log (19007 bytes) INFO 2025-06-26 15:48:16,430 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.08/gps.log (5756 bytes) INFO 2025-06-26 15:48:16,437 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.08/hydroscatlog.log (21610 bytes) INFO 2025-06-26 15:48:16,446 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.08/navigation.log (22074 bytes) INFO 2025-06-26 15:48:16,460 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.08/isuslog.log (0 bytes) WARNING 2025-06-26 15:48:16,460 logs2netcdfs.py download_process_logs():790 [1] /data/auv_data/dorado/missionlogs/2010.257.08/isuslog.log is empty INFO 2025-06-26 15:48:16,460 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.08/parosci.log (26150 bytes) INFO 2025-06-26 15:48:16,466 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.08/tailCone.log (15739 bytes) INFO 2025-06-26 15:48:16,474 logs2netcdfs.py download_process_logs():807 [1] Time to process: 0.06 seconds INFO 2025-06-26 15:48:16,474 process.py download_process():198 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.08/lopc.bin (70000 bytes) INFO 2025-06-26 15:48:16,474 lopcToNetCDF.py main():2297 [1] Processing begun: Thu Jun 26 15:48:16 2025 INFO 2025-06-26 15:48:16,474 lopcToNetCDF.py constructTimestampList():1296 [1] parosci_nc = /data/auv_data/dorado/missionnetcdfs/2010.257.08/parosci.nc INFO 2025-06-26 15:48:16,474 lopcToNetCDF.py constructTimestampList():1297 [1] Using NetCDF4 to get start and end epoch seconds for this mission from this URL: INFO 2025-06-26 15:48:16,474 lopcToNetCDF.py constructTimestampList():1300 [1] /data/auv_data/dorado/missionnetcdfs/2010.257.08/parosci.nc INFO 2025-06-26 15:48:16,475 lopcToNetCDF.py constructTimestampList():1317 [1] From associated parosci.nc file: sensor_on_time = 1284502424.2, sensor_off_time = 1284502490.7 INFO 2025-06-26 15:48:16,476 lopcToNetCDF.py constructTimestampList():1322 [1] Duration is 66 seconds. Expecting to read 132 L frames from the lopc.bin file. INFO 2025-06-26 15:48:16,476 lopcToNetCDF.py constructTimestampList():1330 [1] recCount not passed in, assuming we'll have 132 records from the lopc.bin file. INFO 2025-06-26 15:48:16,477 lopcToNetCDF.py main():2321 [1] Examined sibling parosci.nc file to find startTime = 2010-09-14 22:13:44 Z and endTime = 2010-09-14 22:14:50 Z with 132 records expected to be read from lopc.bin INFO 2025-06-26 15:48:16,477 lopcToNetCDF.py unpackLOPCbin():723 [1] >>> Unpacking LOPC data from /data/auv_data/dorado/missionlogs/2010.257.08/lopc.bin INFO 2025-06-26 15:48:16,477 lopcToNetCDF.py unpackLOPCbin():724 [1] >>> Will write to NetCDF file /data/auv_data/dorado/missionnetcdfs/2010.257.08/lopc.nc INFO 2025-06-26 15:48:16,477 lopcToNetCDF.py openNetCDFFile():1861 [1] Will output NetCDF file to /data/auv_data/dorado/missionnetcdfs/2010.257.08/lopc.nc INFO 2025-06-26 15:48:16,477 lopcToNetCDF.py openNetCDFFile():1887 [1] missionName = 2010.257.08 INFO 2025-06-26 15:48:16,477 lopcToNetCDF.py openNetCDFFile():1910 [1] Writing bin axis for len(self.dataStructure['binSizeList']) = 994 WARNING 2025-06-26 15:48:16,480 lopcToNetCDF.py readCframeData():665 [1] Unable to parse a float from the string cstr[:70] = A0114664 WARNING 2025-06-26 15:48:16,480 lopcToNetCDF.py readCframeData():665 [1] Unable to parse a float from the string cstr[:70] = INFO 2025-06-26 15:48:16,539 lopcToNetCDF.py unpackLOPCbin():951 [1] L Frames sample M Frames ShortLFrame LBeforeMEnd MBeforeLEnd UnknownFrame Garbled L INFO 2025-06-26 15:48:16,539 lopcToNetCDF.py unpackLOPCbin():969 [1] Count Count Count Error Error Error Error Error INFO 2025-06-26 15:48:16,540 lopcToNetCDF.py unpackLOPCbin():987 [1] -------- -------- -------- ----------- ----------- ----------- ----------- ------------ INFO 2025-06-26 15:48:16,559 lopcToNetCDF.py main():2345 [1] >>> Done reading file. INFO 2025-06-26 15:48:16,559 lopcToNetCDF.py main():2346 [1] lFrameCount = 139, mFrameCount = 223 INFO 2025-06-26 15:48:16,559 lopcToNetCDF.py constructTimestampList():1296 [1] parosci_nc = /data/auv_data/dorado/missionnetcdfs/2010.257.08/parosci.nc INFO 2025-06-26 15:48:16,559 lopcToNetCDF.py constructTimestampList():1297 [1] Using NetCDF4 to get start and end epoch seconds for this mission from this URL: INFO 2025-06-26 15:48:16,559 lopcToNetCDF.py constructTimestampList():1300 [1] /data/auv_data/dorado/missionnetcdfs/2010.257.08/parosci.nc INFO 2025-06-26 15:48:16,561 lopcToNetCDF.py constructTimestampList():1317 [1] From associated parosci.nc file: sensor_on_time = 1284502424.2, sensor_off_time = 1284502490.7 INFO 2025-06-26 15:48:16,561 lopcToNetCDF.py constructTimestampList():1322 [1] Duration is 66 seconds. Expecting to read 132 L frames from the lopc.bin file. INFO 2025-06-26 15:48:16,561 lopcToNetCDF.py constructTimestampList():1330 [1] recCount not passed in, assuming we'll have 132 records from the lopc.bin file. INFO 2025-06-26 15:48:16,561 lopcToNetCDF.py constructTimestampList():1340 [1] Calling correctSampleCountList() with sampleCountList[0] = 16254 and len(sampleCountList) = 139 INFO 2025-06-26 15:48:16,561 lopcToNetCDF.py correctSampleCountList():1737 [1] Found overflows at indices: [] INFO 2025-06-26 15:48:16,561 lopcToNetCDF.py correctSampleCountList():1745 [1] Original sampleCountList = [16254 16255 16256 16257 16825 16826 16827 16828 16829 16830 16831 16832 16833 16834 16835 16836 16837 16838 16839 16840 16841 16842 16843 16844 16845 16846 16847 16848 16849 16850 16851 16852 16853 16854 16855 16856 16857 16858 16859 16860 16861 16862 16863 16864 16865 16866 16867 16868 16869 16870 16871 16872 16873 16874 16875 16876 16877 16878 16879 16880 16881 16882 16883 16884 16885 16886 16887 16888 16889 16890 16891 16892 16893 16894 16895 16896 16897 16898 16899 16900 16901 16902 16903 16904 16905 16906 16907 16908 16909 16910 16911 16912 16913 16914 16915 16916 16917 16918 16919 16920 16921 16922 16923 16924 16925 16926 16927 16928 16929 16930 16931 16932 16933 16934 16935 16936 16937 16938 16939 16940 16941 16942 16943 16944 16945 16946 16947 16948 16949 16950 16951 16952 16953 16954 16955 16956 16957 16958 16959] INFO 2025-06-26 15:48:16,562 lopcToNetCDF.py correctSampleCountList():1746 [1] Found 0 0 values at indices: [] INFO 2025-06-26 15:48:16,562 lopcToNetCDF.py correctSampleCountList():1779 [1] Found 0 stuck values at indices: [] INFO 2025-06-26 15:48:16,562 lopcToNetCDF.py deSpike():1588 [1] d_sampleCountList = [ 1 1 1 568 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1] INFO 2025-06-26 15:48:16,563 lopcToNetCDF.py deSpike():1590 [1] Found 1 spike indicators at indices: [4] INFO 2025-06-26 15:48:16,563 lopcToNetCDF.py deSpike():1595 [1] Identifying nature of spike value = 16825 at index = 4 INFO 2025-06-26 15:48:16,563 lopcToNetCDF.py deSpike():1714 [1] This is the last element in spike_indx. No need to deSpike(). INFO 2025-06-26 15:48:16,563 lopcToNetCDF.py correctSampleCountList():1805 [1] After despike() sampleCountList = [16254 16255 16256 16257 16825 16826 16827 16828 16829 16830 16831 16832 16833 16834 16835 16836 16837 16838 16839 16840 16841 16842 16843 16844 16845 16846 16847 16848 16849 16850 16851 16852 16853 16854 16855 16856 16857 16858 16859 16860 16861 16862 16863 16864 16865 16866 16867 16868 16869 16870 16871 16872 16873 16874 16875 16876 16877 16878 16879 16880 16881 16882 16883 16884 16885 16886 16887 16888 16889 16890 16891 16892 16893 16894 16895 16896 16897 16898 16899 16900 16901 16902 16903 16904 16905 16906 16907 16908 16909 16910 16911 16912 16913 16914 16915 16916 16917 16918 16919 16920 16921 16922 16923 16924 16925 16926 16927 16928 16929 16930 16931 16932 16933 16934 16935 16936 16937 16938 16939 16940 16941 16942 16943 16944 16945 16946 16947 16948 16949 16950 16951 16952 16953 16954 16955 16956 16957 16958 16959] INFO 2025-06-26 15:48:16,563 lopcToNetCDF.py constructTimestampList():1347 [1] correctSampleCountList() returned correctedSampleCountList = [16254 16255 16256 16257 16825 16826 16827 16828 16829 16830 16831 16832 16833 16834 16835 16836 16837 16838 16839 16840 16841 16842 16843 16844 16845 16846 16847 16848 16849 16850 16851 16852 16853 16854 16855 16856 16857 16858 16859 16860 16861 16862 16863 16864 16865 16866 16867 16868 16869 16870 16871 16872 16873 16874 16875 16876 16877 16878 16879 16880 16881 16882 16883 16884 16885 16886 16887 16888 16889 16890 16891 16892 16893 16894 16895 16896 16897 16898 16899 16900 16901 16902 16903 16904 16905 16906 16907 16908 16909 16910 16911 16912 16913 16914 16915 16916 16917 16918 16919 16920 16921 16922 16923 16924 16925 16926 16927 16928 16929 16930 16931 16932 16933 16934 16935 16936 16937 16938 16939 16940 16941 16942 16943 16944 16945 16946 16947 16948 16949 16950 16951 16952 16953 16954 16955 16956 16957 16958 16959] with len(correctedSampleCountList) = 139 INFO 2025-06-26 15:48:16,564 lopcToNetCDF.py constructTimestampList():1358 [1] Subtracting 16254 from all values of correctedSampleCountList INFO 2025-06-26 15:48:16,564 lopcToNetCDF.py constructTimestampList():1363 [1] Constructing timestampArray from instrument corrected sampleCount and constant deltaT = 0.500000 INFO 2025-06-26 15:48:16,564 lopcToNetCDF.py constructTimestampList():1368 [1] New re-zeroed correctedSampleCountList = [ 0. 0.5 1. 1.5 285.5 286. 286.5 287. 287.5 288. 288.5 289. 289.5 290. 290.5 291. 291.5 292. 292.5 293. 293.5 294. 294.5 295. 295.5 296. 296.5 297. 297.5 298. 298.5 299. 299.5 300. 300.5 301. 301.5 302. 302.5 303. 303.5 304. 304.5 305. 305.5 306. 306.5 307. 307.5 308. 308.5 309. 309.5 310. 310.5 311. 311.5 312. 312.5 313. 313.5 314. 314.5 315. 315.5 316. 316.5 317. 317.5 318. 318.5 319. 319.5 320. 320.5 321. 321.5 322. 322.5 323. 323.5 324. 324.5 325. 325.5 326. 326.5 327. 327.5 328. 328.5 329. 329.5 330. 330.5 331. 331.5 332. 332.5 333. 333.5 334. 334.5 335. 335.5 336. 336.5 337. 337.5 338. 338.5 339. 339.5 340. 340.5 341. 341.5 342. 342.5 343. 343.5 344. 344.5 345. 345.5 346. 346.5 347. 347.5 348. 348.5 349. 349.5 350. 350.5 351. 351.5 352. 352.5] INFO 2025-06-26 15:48:16,565 lopcToNetCDF.py constructTimestampList():1379 [1] timestampArray = [1.28450242e+09 1.28450242e+09 1.28450243e+09 1.28450243e+09 1.28450271e+09 1.28450271e+09 1.28450271e+09 1.28450271e+09 1.28450271e+09 1.28450271e+09 1.28450271e+09 1.28450271e+09 1.28450271e+09 1.28450271e+09 1.28450271e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450272e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450273e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450274e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450275e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450276e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450277e+09 1.28450278e+09 1.28450278e+09 1.28450278e+09 1.28450278e+09] INFO 2025-06-26 15:48:16,567 lopcToNetCDF.py constructTimestampList():1380 [1] timestampArray[:2] = [1284502424.2 1284502424.7, ..., timestampArray[-2:] = 1284502776.2 1284502776.7] INFO 2025-06-26 15:48:16,567 lopcToNetCDF.py constructTimestampList():1389 [1] timestampList[:2] = [np.float64(1284502424.1914313), np.float64(1284502424.6914313)], ..., timestampList[-2:] = [np.float64(1284502776.1914313), np.float64(1284502776.6914313)]] INFO 2025-06-26 15:48:16,567 lopcToNetCDF.py constructTimestampList():1394 [1] Subsampling correctedSampleCountList (len = 139) according to what got written to the netCDF file by the binning interval INFO 2025-06-26 15:48:16,567 lopcToNetCDF.py constructTimestampList():1399 [1] lFrameCountWrittenList[:2] = [20, 41], ... lFrameCountWrittenList[-2:] = [104, 125] INFO 2025-06-26 15:48:16,567 lopcToNetCDF.py constructTimestampList():1420 [1] len(subSampledCorrectedSampleCountList) = 6 INFO 2025-06-26 15:48:16,567 lopcToNetCDF.py constructTimestampList():1439 [1] len(timestampList) = 139 INFO 2025-06-26 15:48:16,567 lopcToNetCDF.py constructTimestampList():1440 [1] timestampList[:2] = [np.float64(1284502424.1914313), np.float64(1284502424.6914313)], ..., timestampList[-2:] = [np.float64(1284502776.1914313), np.float64(1284502776.6914313)]] INFO 2025-06-26 15:48:16,567 lopcToNetCDF.py constructTimestampList():1446 [1] Subsampling timestampList (len = 139) according to what got written to the netCDF file by the binning interval INFO 2025-06-26 15:48:16,567 lopcToNetCDF.py constructTimestampList():1457 [1] Taking indices [[np.int32(19), np.int32(40)] ... [np.int32(103), np.int32(124)]] from timestampList to create subSampledTimestampList INFO 2025-06-26 15:48:16,567 lopcToNetCDF.py constructTimestampList():1463 [1] len(subSampledTimestampList) = 6 INFO 2025-06-26 15:48:16,567 lopcToNetCDF.py constructTimestampList():1477 [1] Finding elements of cFrameEsecsList that != -9999 INFO 2025-06-26 15:48:16,568 lopcToNetCDF.py closeNetCDFFile():2096 [1] Writing time axis for len(tsList) = 6 INFO 2025-06-26 15:48:16,569 lopcToNetCDF.py closeNetCDFFile():2099 [1] tsList[:1] = [np.float64(1284502717.1914313)], ..., tsList[-2:] = [np.float64(1284502759.1914313), np.float64(1284502769.6914313)] INFO 2025-06-26 15:48:16,569 lopcToNetCDF.py closeNetCDFFile():2100 [1] Begin time = 2010-09-14 22:18:37 Z INFO 2025-06-26 15:48:16,569 lopcToNetCDF.py closeNetCDFFile():2103 [1] End time = 2010-09-14 22:19:29 Z INFO 2025-06-26 15:48:16,569 lopcToNetCDF.py closeNetCDFFile():2107 [1] Writing time axis for len(cFrameEsecsList) = 6 INFO 2025-06-26 15:48:16,569 lopcToNetCDF.py closeNetCDFFile():2111 [1] cFrameEsecsList[:1] = [1.28450249e+09], ..., cFrameEsecsList[-2:] = [1.28450249e+09 1.28450249e+09] INFO 2025-06-26 15:48:16,569 lopcToNetCDF.py closeNetCDFFile():2116 [1] Begin time = 2010-09-14 22:14:48 Z INFO 2025-06-26 15:48:16,569 lopcToNetCDF.py closeNetCDFFile():2120 [1] End time = 2010-09-14 22:14:48 Z INFO 2025-06-26 15:48:16,573 lopcToNetCDF.py main():2381 [1] Created file: /data/auv_data/dorado/missionnetcdfs/2010.257.08/lopc.nc INFO 2025-06-26 15:48:16,573 lopcToNetCDF.py main():2384 [1] Processing finished: Thu Jun 26 15:48:16 2025 Elapsed processing time from start of processing = 0 seconds INFO 2025-06-26 15:48:16,573 process.py calibrate():227 [1] Calibration steps for 2010.257.08 WARNING 2025-06-26 15:48:16,624 calibrate.py _navigation_process():1588 [1] No positive depths found in 2010.257.08/navigation.nc INFO 2025-06-26 15:48:16,627 calibrate.py _nudge_pos():1680 [1] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-06-26 15:48:16,629 calibrate.py _nudge_pos():1711 [1] - - - 0 0.00 - - - INFO 2025-06-26 15:48:16,902 calibrate.py _nudge_pos():1862 [1] 18: - - - 2 0.00 - - INFO 2025-06-26 15:48:16,902 calibrate.py _nudge_pos():1868 [1] Points in final series = 84 WARNING 2025-06-26 15:48:16,907 calibrate.py _depth_process():2193 [1] Expected sample_rate to be 10 Hz, instead it's 8.33 Hz INFO 2025-06-26 15:48:16,924 calibrate.py _geometric_depth_correction():3423 [1] hs2: d_beg_time_diff: 5 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 15:48:16,946 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 18 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:48:16,950 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 18 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:48:16,951 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd1_salinity'] in 2010.257.08/ctd1.nc INFO 2025-06-26 15:48:16,952 calibrate.py _range_qc_combined_nc():898 [1] Setting 0 ctd1_salinity values to NaN INFO 2025-06-26 15:48:16,953 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd1_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:48:16,953 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd1 INFO 2025-06-26 15:48:16,968 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 18 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:48:16,972 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 18 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:48:16,973 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd2_salinity'] in 2010.257.08/ctd2.nc INFO 2025-06-26 15:48:16,974 calibrate.py _range_qc_combined_nc():898 [1] Setting 0 ctd2_salinity values to NaN INFO 2025-06-26 15:48:16,974 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd2_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:48:16,975 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd2 ERROR 2025-06-26 15:48:16,975 calibrate.py process_logs():3542 [1] Error processing isus: isus has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.257.08 ERROR 2025-06-26 15:48:16,975 calibrate.py process_logs():3542 [1] Error processing biolume: biolume has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.257.08 ERROR 2025-06-26 15:48:16,983 calibrate.py process_logs():3542 [1] Error processing ecopuck: ecopuck has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.257.08 INFO 2025-06-26 15:48:16,987 calibrate.py write_netcdf():3508 [1] Writing calibrated instrument data to /data/auv_data/dorado/missionnetcdfs/2010.257.08/dorado_2010.257.08_cal.nc INFO 2025-06-26 15:48:17,024 calibrate.py write_netcdf():3512 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_salinity_onboard, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_salinity, ctd2_salinity_onboard, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_time, lopc_LCcount, lopc_countListSum, lopc_flowSpeed, lopc_nonTransCount, lopc_time, lopc_transCount, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, tailcone_propRpm, tailcone_time, time INFO 2025-06-26 15:48:17,028 process.py align():251 [1] Alignment steps for 2010.257.08 INFO 2025-06-26 15:48:17,047 align.py process_cal():139 [1] Processing dorado_2010.257.08_cal.nc from /data/auv_data/dorado/missionnetcdfs/2010.257.08 INFO 2025-06-26 15:48:17,051 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:48:17,053 align.py process_cal():249 [1] navigation_roll: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:48:17,062 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:48:17,063 align.py process_cal():249 [1] navigation_pitch: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:48:17,071 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:48:17,072 align.py process_cal():249 [1] navigation_yaw: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:48:17,077 align.py process_cal():161 [1] Skipping navigation_posx INFO 2025-06-26 15:48:17,077 align.py process_cal():161 [1] Skipping navigation_posy INFO 2025-06-26 15:48:17,080 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:48:17,081 align.py process_cal():249 [1] navigation_mWaterSpeed: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:48:17,089 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,090 align.py process_cal():249 [1] hs2_bbp420: instrument_sample_rate_hz = 4.01 INFO 2025-06-26 15:48:17,098 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,100 align.py process_cal():249 [1] hs2_bbp700: instrument_sample_rate_hz = 4.01 INFO 2025-06-26 15:48:17,107 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,109 align.py process_cal():249 [1] hs2_fl700: instrument_sample_rate_hz = 4.01 INFO 2025-06-26 15:48:17,117 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,118 align.py process_cal():249 [1] ctd1_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,127 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,128 align.py process_cal():249 [1] ctd1_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,136 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,138 align.py process_cal():249 [1] ctd1_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,146 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,147 align.py process_cal():249 [1] ctd1_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,155 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,157 align.py process_cal():249 [1] ctd1_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,165 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,167 align.py process_cal():249 [1] ctd1_salinity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,175 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,176 align.py process_cal():249 [1] ctd1_dissolvedO2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,184 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,186 align.py process_cal():249 [1] ctd1_oxygen_mll: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,194 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,195 align.py process_cal():249 [1] ctd1_oxygen_umolkg: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,203 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,205 align.py process_cal():249 [1] ctd1_flow1: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,212 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,214 align.py process_cal():249 [1] ctd1_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,222 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,224 align.py process_cal():249 [1] ctd2_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,232 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,234 align.py process_cal():249 [1] ctd2_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,242 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,244 align.py process_cal():249 [1] ctd2_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,252 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,253 align.py process_cal():249 [1] ctd2_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,262 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,263 align.py process_cal():249 [1] ctd2_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,272 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,273 align.py process_cal():249 [1] ctd2_salinity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,282 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,284 align.py process_cal():249 [1] ctd2_flow2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,292 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.08_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:17,294 align.py process_cal():249 [1] ctd2_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:17,305 align.py process_cal():249 [1] lopc_countListSum: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:48:17,316 align.py process_cal():249 [1] lopc_transCount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:48:17,328 align.py process_cal():249 [1] lopc_nonTransCount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:48:17,339 align.py process_cal():249 [1] lopc_LCcount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:48:17,352 align.py process_cal():249 [1] lopc_flowSpeed: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:48:17,364 align.py process_cal():249 [1] tailcone_propRpm: instrument_sample_rate_hz = 4.91 INFO 2025-06-26 15:48:17,374 align.py write_netcdf():337 [1] Writing aligned data to /data/auv_data/dorado/missionnetcdfs/2010.257.08/dorado_2010.257.08_align.nc INFO 2025-06-26 15:48:17,410 align.py write_netcdf():342 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_latitude, ctd1_longitude, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_salinity_onboard, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_latitude, ctd2_longitude, ctd2_salinity, ctd2_salinity_onboard, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_latitude, hs2_longitude, hs2_time, lopc_LCcount, lopc_countListSum, lopc_depth, lopc_flowSpeed, lopc_latitude, lopc_longitude, lopc_nonTransCount, lopc_time, lopc_transCount, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-06-26 15:48:17,412 process.py resample():273 [1] Resampling steps for 2010.257.08 INFO 2025-06-26 15:48:17,413 resample.py resample_mission():1185 [1] Using depth_threshold = 10.00 m INFO 2025-06-26 15:48:17,431 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.257.08/dorado_2010.257.08_align.nc mission netCDF file INFO 2025-06-26 15:48:17,435 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.257.08/dorado_2010.257.08_align.nc mission netCDF file INFO 2025-06-26 15:48:17,435 resample.py get_mission_start_end():1145 [1] navigation: 2010-09-14T22:14:33.758035712 to 2010-09-14T22:14:50.556884992 (0 days 00:04:39.134546176 before mission_end) INFO 2025-06-26 15:48:17,437 resample.py get_mission_start_end():1145 [1] hs2 : 2010-09-14T22:13:49.881041408 to 2010-09-14T22:14:50.686876160 (0 days 00:04:39.004555008 before mission_end) INFO 2025-06-26 15:48:17,438 resample.py get_mission_start_end():1145 [1] ctd1 : 2010-09-14T22:14:03.100135936 to 2010-09-14T22:14:50.586882816 (0 days 00:04:39.104548352 before mission_end) INFO 2025-06-26 15:48:17,439 resample.py get_mission_start_end():1145 [1] ctd2 : 2010-09-14T22:14:03.090136576 to 2010-09-14T22:14:50.576883456 (0 days 00:04:39.114547712 before mission_end) INFO 2025-06-26 15:48:17,440 resample.py get_mission_start_end():1145 [1] lopc : 2010-09-14T22:18:37.191431168 to 2010-09-14T22:19:29.691431168 (0 days 00:00:00 before mission_end) INFO 2025-06-26 15:48:17,441 resample.py get_mission_start_end():1145 [1] tailcone : 2010-09-14T22:13:46.221292288 to 2010-09-14T22:14:50.516887552 (0 days 00:04:39.174543616 before mission_end) INFO 2025-06-26 15:48:17,442 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.257.08/dorado_2010.257.08_align.nc mission netCDF file INFO 2025-06-26 15:48:17,442 resample.py resample_coordinates():249 [1] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,468 resample.py resample_variable():1031 [1] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,476 resample.py resample_variable():1031 [1] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,483 resample.py resample_variable():1031 [1] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,490 resample.py resample_variable():1031 [1] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,498 resample.py resample_variable():1031 [1] Resampling hs2_bbp420 with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,506 resample.py resample_variable():1031 [1] Resampling hs2_bbp700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,513 resample.py resample_variable():1031 [1] Resampling hs2_fl700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,520 resample.py resample_variable():1031 [1] Resampling ctd1_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,526 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,532 resample.py resample_variable():1031 [1] Resampling ctd1_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,539 resample.py resample_variable():1031 [1] Resampling ctd1_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,545 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,551 resample.py resample_variable():1031 [1] Resampling ctd1_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,557 resample.py resample_variable():1031 [1] Resampling ctd1_dissolvedO2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,563 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_mll with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,569 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_umolkg with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,575 resample.py resample_variable():1031 [1] Resampling ctd1_flow1 with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,583 resample.py resample_variable():1031 [1] Resampling ctd2_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,590 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,597 resample.py resample_variable():1031 [1] Resampling ctd2_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,604 resample.py resample_variable():1031 [1] Resampling ctd2_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,611 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,618 resample.py resample_variable():1031 [1] Resampling ctd2_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,625 resample.py resample_variable():1031 [1] Resampling ctd2_flow2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,633 resample.py resample_variable():1031 [1] Resampling lopc_countListSum with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,641 resample.py resample_variable():1031 [1] Resampling lopc_transCount with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,648 resample.py resample_variable():1031 [1] Resampling lopc_nonTransCount with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,656 resample.py resample_variable():1031 [1] Resampling lopc_LCcount with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,664 resample.py resample_variable():1031 [1] Resampling lopc_flowSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,672 resample.py resample_variable():1031 [1] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:17,770 resample.py resample_mission():1297 [1] Saved resampled mission to /data/auv_data/dorado/missionnetcdfs/2010.257.08/dorado_2010.257.08_1S.nc INFO 2025-06-26 15:48:18,287 create_products.py gulper_odv():401 [1] No gulper times found for 2010.257.08 INFO 2025-06-26 15:48:18,288 process.py archive():337 [1] Archiving steps for 2010.257.08 INFO 2025-06-26 15:48:18,288 process.py archive():347 [1] nc_file_base = /data/auv_data/dorado/missionnetcdfs/2010.257.08/dorado_2010.257.08, BASE_PATH = /data/auv_data INFO 2025-06-26 15:48:18,288 archive.py copy_to_AUVTCD():60 [1] Archiving /data/auv_data/dorado/missionnetcdfs/2010.257.08/dorado_2010.257.08 files to /Volumes/AUVCTD/surveys/2010/netcdf INFO 2025-06-26 15:48:18,289 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.257.08_1S.nc INFO 2025-06-26 15:48:18,296 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.08/dorado_2010.257.08_1S.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:48:18,297 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.257.08_cal.nc INFO 2025-06-26 15:48:18,303 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.08/dorado_2010.257.08_cal.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:48:18,304 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.257.08_align.nc INFO 2025-06-26 15:48:18,312 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.08/dorado_2010.257.08_align.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:48:18,317 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.08/ctdDriver.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.08 done. INFO 2025-06-26 15:48:18,321 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.08/ctdDriver2.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.08 done. INFO 2025-06-26 15:48:18,324 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.08/gps.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.08 done. INFO 2025-06-26 15:48:18,328 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.08/hydroscatlog.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.08 done. INFO 2025-06-26 15:48:18,332 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.08/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.08 done. INFO 2025-06-26 15:48:18,336 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.08/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.08 done. INFO 2025-06-26 15:48:18,339 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.08/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.08 done. INFO 2025-06-26 15:48:18,345 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.08/lopc.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.08 done. INFO 2025-06-26 15:48:18,345 archive.py copy_to_AUVTCD():116 [1] Archiving product files INFO 2025-06-26 15:48:18,345 archive.py copy_to_AUVTCD():161 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.08/dorado_2010.257.08_processing.log /Volumes/AUVCTD/surveys/2010/netcdf