INFO 2025-06-26 15:48:10,294 process.py process_mission():429 [1] commandline = src/data/process_dorado.py --start_year 2005 --end_year 2014 --num_cores 1 -v --noinput --clobber INFO 2025-06-26 15:48:10,294 process.py process_mission():434 [1] dorado_info[mission]["comment"] = ESP drifter missions out at station 67-70 with Flyer doing casts and ESP drifting south toward Davidson Seamount - no gulpers (Frederic sent me note about survey grouping) Faulty parosci lead to several mission depth aborts at beginning of this set of volume surveys - ctdToUse = ctd1 INFO 2025-06-26 15:48:10,294 process.py process_mission():449 [1] Processing AUVCTD mission 2010.257.06 by user docker_user on host eae60d30a712 INFO 2025-06-26 15:48:10,294 process.py download_process():165 [1] Download and processing steps for 2010.257.06 INFO 2025-06-26 15:48:10,294 logs2netcdfs.py download_process_logs():739 [1] src_dir = /Volumes/AUVCTD/missionlogs/2010/2010257/2010.257.06 INFO 2025-06-26 15:48:10,294 logs2netcdfs.py download_process_logs():768 [1] Rsyncing /Volumes/AUVCTD/missionlogs/2010/2010257/2010.257.06 to /data/auv_data/dorado/missionlogs/2010.257.06 INFO 2025-06-26 15:48:10,694 logs2netcdfs.py download_process_logs():779 [1] Processing mission: dorado 2010.257.06 INFO 2025-06-26 15:48:10,695 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.06/ctdDriver.log (19595 bytes) INFO 2025-06-26 15:48:10,704 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.06/ctdDriver2.log (19487 bytes) INFO 2025-06-26 15:48:10,712 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.06/gps.log (5900 bytes) INFO 2025-06-26 15:48:10,719 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.06/hydroscatlog.log (21946 bytes) INFO 2025-06-26 15:48:10,730 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.06/navigation.log (23254 bytes) INFO 2025-06-26 15:48:10,744 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.06/isuslog.log (0 bytes) WARNING 2025-06-26 15:48:10,744 logs2netcdfs.py download_process_logs():790 [1] /data/auv_data/dorado/missionlogs/2010.257.06/isuslog.log is empty INFO 2025-06-26 15:48:10,744 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.06/parosci.log (26534 bytes) INFO 2025-06-26 15:48:10,750 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.06/tailCone.log (16123 bytes) INFO 2025-06-26 15:48:10,758 logs2netcdfs.py download_process_logs():807 [1] Time to process: 0.06 seconds INFO 2025-06-26 15:48:10,758 process.py download_process():198 [1] Processing file /data/auv_data/dorado/missionlogs/2010.257.06/lopc.bin (58000 bytes) INFO 2025-06-26 15:48:10,758 lopcToNetCDF.py main():2297 [1] Processing begun: Thu Jun 26 15:48:10 2025 INFO 2025-06-26 15:48:10,758 lopcToNetCDF.py constructTimestampList():1296 [1] parosci_nc = /data/auv_data/dorado/missionnetcdfs/2010.257.06/parosci.nc INFO 2025-06-26 15:48:10,758 lopcToNetCDF.py constructTimestampList():1297 [1] Using NetCDF4 to get start and end epoch seconds for this mission from this URL: INFO 2025-06-26 15:48:10,758 lopcToNetCDF.py constructTimestampList():1300 [1] /data/auv_data/dorado/missionnetcdfs/2010.257.06/parosci.nc INFO 2025-06-26 15:48:10,759 lopcToNetCDF.py constructTimestampList():1317 [1] From associated parosci.nc file: sensor_on_time = 1284502069.5, sensor_off_time = 1284502137.2 INFO 2025-06-26 15:48:10,760 lopcToNetCDF.py constructTimestampList():1322 [1] Duration is 67 seconds. Expecting to read 134 L frames from the lopc.bin file. INFO 2025-06-26 15:48:10,760 lopcToNetCDF.py constructTimestampList():1330 [1] recCount not passed in, assuming we'll have 134 records from the lopc.bin file. INFO 2025-06-26 15:48:10,761 lopcToNetCDF.py main():2321 [1] Examined sibling parosci.nc file to find startTime = 2010-09-14 22:07:49 Z and endTime = 2010-09-14 22:08:57 Z with 134 records expected to be read from lopc.bin INFO 2025-06-26 15:48:10,761 lopcToNetCDF.py unpackLOPCbin():723 [1] >>> Unpacking LOPC data from /data/auv_data/dorado/missionlogs/2010.257.06/lopc.bin INFO 2025-06-26 15:48:10,761 lopcToNetCDF.py unpackLOPCbin():724 [1] >>> Will write to NetCDF file /data/auv_data/dorado/missionnetcdfs/2010.257.06/lopc.nc INFO 2025-06-26 15:48:10,761 lopcToNetCDF.py openNetCDFFile():1861 [1] Will output NetCDF file to /data/auv_data/dorado/missionnetcdfs/2010.257.06/lopc.nc INFO 2025-06-26 15:48:10,761 lopcToNetCDF.py openNetCDFFile():1887 [1] missionName = 2010.257.06 INFO 2025-06-26 15:48:10,761 lopcToNetCDF.py openNetCDFFile():1910 [1] Writing bin axis for len(self.dataStructure['binSizeList']) = 994 WARNING 2025-06-26 15:48:10,764 lopcToNetCDF.py readCframeData():665 [1] Unable to parse a float from the string cstr[:70] = A024189 WARNING 2025-06-26 15:48:10,764 lopcToNetCDF.py readCframeData():665 [1] Unable to parse a float from the string cstr[:70] = INFO 2025-06-26 15:48:10,814 lopcToNetCDF.py unpackLOPCbin():951 [1] L Frames sample M Frames ShortLFrame LBeforeMEnd MBeforeLEnd UnknownFrame Garbled L INFO 2025-06-26 15:48:10,814 lopcToNetCDF.py unpackLOPCbin():969 [1] Count Count Count Error Error Error Error Error INFO 2025-06-26 15:48:10,814 lopcToNetCDF.py unpackLOPCbin():987 [1] -------- -------- -------- ----------- ----------- ----------- ----------- ------------ INFO 2025-06-26 15:48:10,835 lopcToNetCDF.py main():2345 [1] >>> Done reading file. INFO 2025-06-26 15:48:10,835 lopcToNetCDF.py main():2346 [1] lFrameCount = 139, mFrameCount = 167 INFO 2025-06-26 15:48:10,835 lopcToNetCDF.py constructTimestampList():1296 [1] parosci_nc = /data/auv_data/dorado/missionnetcdfs/2010.257.06/parosci.nc INFO 2025-06-26 15:48:10,835 lopcToNetCDF.py constructTimestampList():1297 [1] Using NetCDF4 to get start and end epoch seconds for this mission from this URL: INFO 2025-06-26 15:48:10,835 lopcToNetCDF.py constructTimestampList():1300 [1] /data/auv_data/dorado/missionnetcdfs/2010.257.06/parosci.nc INFO 2025-06-26 15:48:10,837 lopcToNetCDF.py constructTimestampList():1317 [1] From associated parosci.nc file: sensor_on_time = 1284502069.5, sensor_off_time = 1284502137.2 INFO 2025-06-26 15:48:10,837 lopcToNetCDF.py constructTimestampList():1322 [1] Duration is 67 seconds. Expecting to read 134 L frames from the lopc.bin file. INFO 2025-06-26 15:48:10,837 lopcToNetCDF.py constructTimestampList():1330 [1] recCount not passed in, assuming we'll have 134 records from the lopc.bin file. INFO 2025-06-26 15:48:10,837 lopcToNetCDF.py constructTimestampList():1340 [1] Calling correctSampleCountList() with sampleCountList[0] = 16012 and len(sampleCountList) = 139 INFO 2025-06-26 15:48:10,837 lopcToNetCDF.py correctSampleCountList():1737 [1] Found overflows at indices: [] INFO 2025-06-26 15:48:10,837 lopcToNetCDF.py correctSampleCountList():1745 [1] Original sampleCountList = [16012 16013 16014 16117 16118 16119 16120 16121 16122 16123 16124 16125 16126 16127 16128 16129 16130 16131 16132 16133 16134 16135 16136 16137 16138 16139 16140 16141 16142 16143 16144 16145 16146 16147 16148 16149 16150 16151 16152 16153 16154 16155 16156 16157 16158 16159 16160 16161 16162 16163 16164 16165 16166 16167 16168 16169 16170 16171 16172 16173 16174 16175 16176 16177 16178 16179 16180 16181 16182 16183 16184 16185 16186 16187 16188 16189 16190 16191 16192 16193 16194 16195 16196 16197 16198 16199 16200 16201 16202 16203 16204 16205 16206 16207 16208 16209 16210 16211 16212 16213 16214 16215 16216 16217 16218 16219 16220 16221 16222 16223 16224 16225 16226 16227 16228 16229 16230 16231 16232 16233 16234 16235 16236 16237 16238 16239 16240 16241 16242 16243 16244 16245 16246 16247 16248 16249 16250 16251 16252] INFO 2025-06-26 15:48:10,838 lopcToNetCDF.py correctSampleCountList():1746 [1] Found 0 0 values at indices: [] INFO 2025-06-26 15:48:10,838 lopcToNetCDF.py correctSampleCountList():1779 [1] Found 0 stuck values at indices: [] INFO 2025-06-26 15:48:10,838 lopcToNetCDF.py deSpike():1588 [1] d_sampleCountList = [ 1 1 103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1] INFO 2025-06-26 15:48:10,839 lopcToNetCDF.py deSpike():1590 [1] Found 0 spike indicators at indices: [] INFO 2025-06-26 15:48:10,839 lopcToNetCDF.py correctSampleCountList():1805 [1] After despike() sampleCountList = [16012 16013 16014 16117 16118 16119 16120 16121 16122 16123 16124 16125 16126 16127 16128 16129 16130 16131 16132 16133 16134 16135 16136 16137 16138 16139 16140 16141 16142 16143 16144 16145 16146 16147 16148 16149 16150 16151 16152 16153 16154 16155 16156 16157 16158 16159 16160 16161 16162 16163 16164 16165 16166 16167 16168 16169 16170 16171 16172 16173 16174 16175 16176 16177 16178 16179 16180 16181 16182 16183 16184 16185 16186 16187 16188 16189 16190 16191 16192 16193 16194 16195 16196 16197 16198 16199 16200 16201 16202 16203 16204 16205 16206 16207 16208 16209 16210 16211 16212 16213 16214 16215 16216 16217 16218 16219 16220 16221 16222 16223 16224 16225 16226 16227 16228 16229 16230 16231 16232 16233 16234 16235 16236 16237 16238 16239 16240 16241 16242 16243 16244 16245 16246 16247 16248 16249 16250 16251 16252] INFO 2025-06-26 15:48:10,839 lopcToNetCDF.py constructTimestampList():1347 [1] correctSampleCountList() returned correctedSampleCountList = [16012 16013 16014 16117 16118 16119 16120 16121 16122 16123 16124 16125 16126 16127 16128 16129 16130 16131 16132 16133 16134 16135 16136 16137 16138 16139 16140 16141 16142 16143 16144 16145 16146 16147 16148 16149 16150 16151 16152 16153 16154 16155 16156 16157 16158 16159 16160 16161 16162 16163 16164 16165 16166 16167 16168 16169 16170 16171 16172 16173 16174 16175 16176 16177 16178 16179 16180 16181 16182 16183 16184 16185 16186 16187 16188 16189 16190 16191 16192 16193 16194 16195 16196 16197 16198 16199 16200 16201 16202 16203 16204 16205 16206 16207 16208 16209 16210 16211 16212 16213 16214 16215 16216 16217 16218 16219 16220 16221 16222 16223 16224 16225 16226 16227 16228 16229 16230 16231 16232 16233 16234 16235 16236 16237 16238 16239 16240 16241 16242 16243 16244 16245 16246 16247 16248 16249 16250 16251 16252] with len(correctedSampleCountList) = 139 INFO 2025-06-26 15:48:10,840 lopcToNetCDF.py constructTimestampList():1358 [1] Subtracting 16012 from all values of correctedSampleCountList INFO 2025-06-26 15:48:10,840 lopcToNetCDF.py constructTimestampList():1363 [1] Constructing timestampArray from instrument corrected sampleCount and constant deltaT = 0.500000 INFO 2025-06-26 15:48:10,840 lopcToNetCDF.py constructTimestampList():1368 [1] New re-zeroed correctedSampleCountList = [ 0. 0.5 1. 52.5 53. 53.5 54. 54.5 55. 55.5 56. 56.5 57. 57.5 58. 58.5 59. 59.5 60. 60.5 61. 61.5 62. 62.5 63. 63.5 64. 64.5 65. 65.5 66. 66.5 67. 67.5 68. 68.5 69. 69.5 70. 70.5 71. 71.5 72. 72.5 73. 73.5 74. 74.5 75. 75.5 76. 76.5 77. 77.5 78. 78.5 79. 79.5 80. 80.5 81. 81.5 82. 82.5 83. 83.5 84. 84.5 85. 85.5 86. 86.5 87. 87.5 88. 88.5 89. 89.5 90. 90.5 91. 91.5 92. 92.5 93. 93.5 94. 94.5 95. 95.5 96. 96.5 97. 97.5 98. 98.5 99. 99.5 100. 100.5 101. 101.5 102. 102.5 103. 103.5 104. 104.5 105. 105.5 106. 106.5 107. 107.5 108. 108.5 109. 109.5 110. 110.5 111. 111.5 112. 112.5 113. 113.5 114. 114.5 115. 115.5 116. 116.5 117. 117.5 118. 118.5 119. 119.5 120. ] INFO 2025-06-26 15:48:10,841 lopcToNetCDF.py constructTimestampList():1379 [1] timestampArray = [1.28450207e+09 1.28450207e+09 1.28450207e+09 1.28450212e+09 1.28450212e+09 1.28450212e+09 1.28450212e+09 1.28450212e+09 1.28450212e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450213e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450214e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450215e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450216e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450217e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450218e+09 1.28450219e+09 1.28450219e+09 1.28450219e+09 1.28450219e+09 1.28450219e+09 1.28450219e+09 1.28450219e+09 1.28450219e+09 1.28450219e+09 1.28450219e+09] INFO 2025-06-26 15:48:10,842 lopcToNetCDF.py constructTimestampList():1380 [1] timestampArray[:2] = [1284502069.5 1284502070.0, ..., timestampArray[-2:] = 1284502189.0 1284502189.5] INFO 2025-06-26 15:48:10,843 lopcToNetCDF.py constructTimestampList():1389 [1] timestampList[:2] = [np.float64(1284502069.5357268), np.float64(1284502070.0357268)], ..., timestampList[-2:] = [np.float64(1284502189.0357268), np.float64(1284502189.5357268)]] INFO 2025-06-26 15:48:10,843 lopcToNetCDF.py constructTimestampList():1394 [1] Subsampling correctedSampleCountList (len = 139) according to what got written to the netCDF file by the binning interval INFO 2025-06-26 15:48:10,843 lopcToNetCDF.py constructTimestampList():1399 [1] lFrameCountWrittenList[:2] = [20, 41], ... lFrameCountWrittenList[-2:] = [104, 125] INFO 2025-06-26 15:48:10,843 lopcToNetCDF.py constructTimestampList():1420 [1] len(subSampledCorrectedSampleCountList) = 6 INFO 2025-06-26 15:48:10,843 lopcToNetCDF.py constructTimestampList():1439 [1] len(timestampList) = 139 INFO 2025-06-26 15:48:10,843 lopcToNetCDF.py constructTimestampList():1440 [1] timestampList[:2] = [np.float64(1284502069.5357268), np.float64(1284502070.0357268)], ..., timestampList[-2:] = [np.float64(1284502189.0357268), np.float64(1284502189.5357268)]] INFO 2025-06-26 15:48:10,843 lopcToNetCDF.py constructTimestampList():1446 [1] Subsampling timestampList (len = 139) according to what got written to the netCDF file by the binning interval INFO 2025-06-26 15:48:10,843 lopcToNetCDF.py constructTimestampList():1457 [1] Taking indices [[np.int32(19), np.int32(40)] ... [np.int32(103), np.int32(124)]] from timestampList to create subSampledTimestampList INFO 2025-06-26 15:48:10,843 lopcToNetCDF.py constructTimestampList():1463 [1] len(subSampledTimestampList) = 6 INFO 2025-06-26 15:48:10,843 lopcToNetCDF.py constructTimestampList():1477 [1] Finding elements of cFrameEsecsList that != -9999 INFO 2025-06-26 15:48:10,844 lopcToNetCDF.py closeNetCDFFile():2096 [1] Writing time axis for len(tsList) = 6 INFO 2025-06-26 15:48:10,844 lopcToNetCDF.py closeNetCDFFile():2099 [1] tsList[:1] = [np.float64(1284502130.0357268)], ..., tsList[-2:] = [np.float64(1284502172.0357268), np.float64(1284502182.5357268)] INFO 2025-06-26 15:48:10,844 lopcToNetCDF.py closeNetCDFFile():2100 [1] Begin time = 2010-09-14 22:08:50 Z INFO 2025-06-26 15:48:10,844 lopcToNetCDF.py closeNetCDFFile():2103 [1] End time = 2010-09-14 22:09:42 Z INFO 2025-06-26 15:48:10,844 lopcToNetCDF.py closeNetCDFFile():2107 [1] Writing time axis for len(cFrameEsecsList) = 6 INFO 2025-06-26 15:48:10,845 lopcToNetCDF.py closeNetCDFFile():2111 [1] cFrameEsecsList[:1] = [1.28450214e+09], ..., cFrameEsecsList[-2:] = [1.28450214e+09 1.28450214e+09] INFO 2025-06-26 15:48:10,845 lopcToNetCDF.py closeNetCDFFile():2116 [1] Begin time = 2010-09-14 22:08:55 Z INFO 2025-06-26 15:48:10,845 lopcToNetCDF.py closeNetCDFFile():2120 [1] End time = 2010-09-14 22:08:55 Z INFO 2025-06-26 15:48:10,848 lopcToNetCDF.py main():2381 [1] Created file: /data/auv_data/dorado/missionnetcdfs/2010.257.06/lopc.nc INFO 2025-06-26 15:48:10,849 lopcToNetCDF.py main():2384 [1] Processing finished: Thu Jun 26 15:48:10 2025 Elapsed processing time from start of processing = 0 seconds INFO 2025-06-26 15:48:10,849 process.py calibrate():227 [1] Calibration steps for 2010.257.06 WARNING 2025-06-26 15:48:10,899 calibrate.py _navigation_process():1588 [1] No positive depths found in 2010.257.06/navigation.nc INFO 2025-06-26 15:48:10,902 calibrate.py _nudge_pos():1680 [1] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-06-26 15:48:10,904 calibrate.py _nudge_pos():1711 [1] - - - 0 0.00 - - - INFO 2025-06-26 15:48:11,176 calibrate.py _nudge_pos():1862 [1] 19: - - - 1 0.00 - - INFO 2025-06-26 15:48:11,177 calibrate.py _nudge_pos():1868 [1] Points in final series = 90 WARNING 2025-06-26 15:48:11,181 calibrate.py _depth_process():2193 [1] Expected sample_rate to be 10 Hz, instead it's 8.33 Hz INFO 2025-06-26 15:48:11,198 calibrate.py _geometric_depth_correction():3423 [1] hs2: d_beg_time_diff: 5 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:48:11,221 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 18 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:48:11,225 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 18 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:48:11,226 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd1_salinity'] in 2010.257.06/ctd1.nc INFO 2025-06-26 15:48:11,227 calibrate.py _range_qc_combined_nc():898 [1] Setting 0 ctd1_salinity values to NaN INFO 2025-06-26 15:48:11,227 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd1_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:48:11,227 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd1 INFO 2025-06-26 15:48:11,244 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 19 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 15:48:11,247 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 19 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 15:48:11,249 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd2_salinity'] in 2010.257.06/ctd2.nc INFO 2025-06-26 15:48:11,249 calibrate.py _range_qc_combined_nc():898 [1] Setting 0 ctd2_salinity values to NaN INFO 2025-06-26 15:48:11,250 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd2_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:48:11,250 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd2 ERROR 2025-06-26 15:48:11,250 calibrate.py process_logs():3542 [1] Error processing isus: isus has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.257.06 ERROR 2025-06-26 15:48:11,250 calibrate.py process_logs():3542 [1] Error processing biolume: biolume has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.257.06 ERROR 2025-06-26 15:48:11,260 calibrate.py process_logs():3542 [1] Error processing ecopuck: ecopuck has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.257.06 INFO 2025-06-26 15:48:11,263 calibrate.py write_netcdf():3508 [1] Writing calibrated instrument data to /data/auv_data/dorado/missionnetcdfs/2010.257.06/dorado_2010.257.06_cal.nc INFO 2025-06-26 15:48:11,300 calibrate.py write_netcdf():3512 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_salinity_onboard, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_salinity, ctd2_salinity_onboard, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_time, lopc_LCcount, lopc_countListSum, lopc_flowSpeed, lopc_nonTransCount, lopc_time, lopc_transCount, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, tailcone_propRpm, tailcone_time, time INFO 2025-06-26 15:48:11,304 process.py align():251 [1] Alignment steps for 2010.257.06 INFO 2025-06-26 15:48:11,323 align.py process_cal():139 [1] Processing dorado_2010.257.06_cal.nc from /data/auv_data/dorado/missionnetcdfs/2010.257.06 INFO 2025-06-26 15:48:11,326 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:48:11,328 align.py process_cal():249 [1] navigation_roll: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:48:11,336 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:48:11,338 align.py process_cal():249 [1] navigation_pitch: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:48:11,345 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:48:11,346 align.py process_cal():249 [1] navigation_yaw: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:48:11,350 align.py process_cal():161 [1] Skipping navigation_posx INFO 2025-06-26 15:48:11,350 align.py process_cal():161 [1] Skipping navigation_posy INFO 2025-06-26 15:48:11,353 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:48:11,354 align.py process_cal():249 [1] navigation_mWaterSpeed: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:48:11,362 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,363 align.py process_cal():249 [1] hs2_bbp420: instrument_sample_rate_hz = 4.01 INFO 2025-06-26 15:48:11,371 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,372 align.py process_cal():249 [1] hs2_bbp700: instrument_sample_rate_hz = 4.01 INFO 2025-06-26 15:48:11,380 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,381 align.py process_cal():249 [1] hs2_fl700: instrument_sample_rate_hz = 4.01 INFO 2025-06-26 15:48:11,389 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,390 align.py process_cal():249 [1] ctd1_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,398 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,399 align.py process_cal():249 [1] ctd1_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,407 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,409 align.py process_cal():249 [1] ctd1_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,416 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,418 align.py process_cal():249 [1] ctd1_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,425 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,427 align.py process_cal():249 [1] ctd1_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,434 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,436 align.py process_cal():249 [1] ctd1_salinity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,444 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,446 align.py process_cal():249 [1] ctd1_dissolvedO2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,453 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,455 align.py process_cal():249 [1] ctd1_oxygen_mll: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,463 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,465 align.py process_cal():249 [1] ctd1_oxygen_umolkg: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,472 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,474 align.py process_cal():249 [1] ctd1_flow1: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,482 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,483 align.py process_cal():249 [1] ctd1_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,491 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,493 align.py process_cal():249 [1] ctd2_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,502 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,504 align.py process_cal():249 [1] ctd2_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,512 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,514 align.py process_cal():249 [1] ctd2_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,522 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,524 align.py process_cal():249 [1] ctd2_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,532 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,533 align.py process_cal():249 [1] ctd2_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,542 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,543 align.py process_cal():249 [1] ctd2_salinity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,552 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,553 align.py process_cal():249 [1] ctd2_flow2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,562 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.257.06_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:48:11,563 align.py process_cal():249 [1] ctd2_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:48:11,574 align.py process_cal():249 [1] lopc_countListSum: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:48:11,585 align.py process_cal():249 [1] lopc_transCount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:48:11,596 align.py process_cal():249 [1] lopc_nonTransCount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:48:11,607 align.py process_cal():249 [1] lopc_LCcount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:48:11,618 align.py process_cal():249 [1] lopc_flowSpeed: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:48:11,630 align.py process_cal():249 [1] tailcone_propRpm: instrument_sample_rate_hz = 4.91 INFO 2025-06-26 15:48:11,639 align.py write_netcdf():337 [1] Writing aligned data to /data/auv_data/dorado/missionnetcdfs/2010.257.06/dorado_2010.257.06_align.nc INFO 2025-06-26 15:48:11,676 align.py write_netcdf():342 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_latitude, ctd1_longitude, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_salinity_onboard, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_latitude, ctd2_longitude, ctd2_salinity, ctd2_salinity_onboard, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_latitude, hs2_longitude, hs2_time, lopc_LCcount, lopc_countListSum, lopc_depth, lopc_flowSpeed, lopc_latitude, lopc_longitude, lopc_nonTransCount, lopc_time, lopc_transCount, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-06-26 15:48:11,678 process.py resample():273 [1] Resampling steps for 2010.257.06 INFO 2025-06-26 15:48:11,679 resample.py resample_mission():1185 [1] Using depth_threshold = 10.00 m INFO 2025-06-26 15:48:11,697 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.257.06/dorado_2010.257.06_align.nc mission netCDF file INFO 2025-06-26 15:48:11,700 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.257.06/dorado_2010.257.06_align.nc mission netCDF file INFO 2025-06-26 15:48:11,701 resample.py get_mission_start_end():1145 [1] navigation: 2010-09-14T22:08:39.442307840 to 2010-09-14T22:08:57.241088512 (0 days 00:00:45.294638336 before mission_end) INFO 2025-06-26 15:48:11,703 resample.py get_mission_start_end():1145 [1] hs2 : 2010-09-14T22:07:55.305331712 to 2010-09-14T22:08:57.091099136 (0 days 00:00:45.444627712 before mission_end) INFO 2025-06-26 15:48:11,704 resample.py get_mission_start_end():1145 [1] ctd1 : 2010-09-14T22:08:08.104454656 to 2010-09-14T22:08:57.081099776 (0 days 00:00:45.454627072 before mission_end) INFO 2025-06-26 15:48:11,705 resample.py get_mission_start_end():1145 [1] ctd2 : 2010-09-14T22:08:08.584421888 to 2010-09-14T22:08:57.311084032 (0 days 00:00:45.224642816 before mission_end) INFO 2025-06-26 15:48:11,706 resample.py get_mission_start_end():1145 [1] lopc : 2010-09-14T22:08:50.035726848 to 2010-09-14T22:09:42.535726848 (0 days 00:00:00 before mission_end) INFO 2025-06-26 15:48:11,707 resample.py get_mission_start_end():1145 [1] tailcone : 2010-09-14T22:07:51.265608192 to 2010-09-14T22:08:57.261087488 (0 days 00:00:45.274639360 before mission_end) INFO 2025-06-26 15:48:11,708 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.257.06/dorado_2010.257.06_align.nc mission netCDF file INFO 2025-06-26 15:48:11,708 resample.py resample_coordinates():249 [1] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,735 resample.py resample_variable():1031 [1] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,742 resample.py resample_variable():1031 [1] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,750 resample.py resample_variable():1031 [1] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,757 resample.py resample_variable():1031 [1] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,765 resample.py resample_variable():1031 [1] Resampling hs2_bbp420 with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,773 resample.py resample_variable():1031 [1] Resampling hs2_bbp700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,780 resample.py resample_variable():1031 [1] Resampling hs2_fl700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,787 resample.py resample_variable():1031 [1] Resampling ctd1_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,794 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,800 resample.py resample_variable():1031 [1] Resampling ctd1_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,807 resample.py resample_variable():1031 [1] Resampling ctd1_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,813 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,820 resample.py resample_variable():1031 [1] Resampling ctd1_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,826 resample.py resample_variable():1031 [1] Resampling ctd1_dissolvedO2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,832 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_mll with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,839 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_umolkg with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,845 resample.py resample_variable():1031 [1] Resampling ctd1_flow1 with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,853 resample.py resample_variable():1031 [1] Resampling ctd2_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,862 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,870 resample.py resample_variable():1031 [1] Resampling ctd2_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,877 resample.py resample_variable():1031 [1] Resampling ctd2_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,885 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,893 resample.py resample_variable():1031 [1] Resampling ctd2_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,901 resample.py resample_variable():1031 [1] Resampling ctd2_flow2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,909 resample.py resample_variable():1031 [1] Resampling lopc_countListSum with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,917 resample.py resample_variable():1031 [1] Resampling lopc_transCount with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,925 resample.py resample_variable():1031 [1] Resampling lopc_nonTransCount with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,932 resample.py resample_variable():1031 [1] Resampling lopc_LCcount with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,940 resample.py resample_variable():1031 [1] Resampling lopc_flowSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:11,948 resample.py resample_variable():1031 [1] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-06-26 15:48:12,059 resample.py resample_mission():1297 [1] Saved resampled mission to /data/auv_data/dorado/missionnetcdfs/2010.257.06/dorado_2010.257.06_1S.nc INFO 2025-06-26 15:48:12,546 create_products.py gulper_odv():401 [1] No gulper times found for 2010.257.06 INFO 2025-06-26 15:48:12,546 process.py archive():337 [1] Archiving steps for 2010.257.06 INFO 2025-06-26 15:48:12,546 process.py archive():347 [1] nc_file_base = /data/auv_data/dorado/missionnetcdfs/2010.257.06/dorado_2010.257.06, BASE_PATH = /data/auv_data INFO 2025-06-26 15:48:12,546 archive.py copy_to_AUVTCD():60 [1] Archiving /data/auv_data/dorado/missionnetcdfs/2010.257.06/dorado_2010.257.06 files to /Volumes/AUVCTD/surveys/2010/netcdf INFO 2025-06-26 15:48:12,547 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.257.06_1S.nc INFO 2025-06-26 15:48:12,552 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.06/dorado_2010.257.06_1S.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:48:12,553 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.257.06_cal.nc INFO 2025-06-26 15:48:12,559 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.06/dorado_2010.257.06_cal.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:48:12,559 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.257.06_align.nc INFO 2025-06-26 15:48:12,566 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.06/dorado_2010.257.06_align.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:48:12,570 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.06/ctdDriver.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.06 done. INFO 2025-06-26 15:48:12,574 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.06/ctdDriver2.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.06 done. INFO 2025-06-26 15:48:12,578 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.06/gps.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.06 done. INFO 2025-06-26 15:48:12,581 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.06/hydroscatlog.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.06 done. INFO 2025-06-26 15:48:12,585 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.06/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.06 done. INFO 2025-06-26 15:48:12,589 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.06/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.06 done. INFO 2025-06-26 15:48:12,593 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.06/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.06 done. INFO 2025-06-26 15:48:12,599 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.06/lopc.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010257/2010.257.06 done. INFO 2025-06-26 15:48:12,599 archive.py copy_to_AUVTCD():116 [1] Archiving product files INFO 2025-06-26 15:48:12,599 archive.py copy_to_AUVTCD():161 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.257.06/dorado_2010.257.06_processing.log /Volumes/AUVCTD/surveys/2010/netcdf