INFO 2025-06-26 15:44:03,469 process.py process_mission():429 [1] commandline = src/data/process_dorado.py --start_year 2005 --end_year 2014 --num_cores 1 -v --noinput --clobber INFO 2025-06-26 15:44:03,469 process.py process_mission():434 [1] dorado_info[mission]["comment"] = AUVCTD mission - Ryan mission in Monterey Bay rhodamine sensor replaces CDOM - won't process - ctdToUse = ctd1 INFO 2025-06-26 15:44:03,469 process.py process_mission():449 [1] Processing AUVCTD mission 2010.174.00 by user docker_user on host eae60d30a712 INFO 2025-06-26 15:44:03,469 process.py download_process():165 [1] Download and processing steps for 2010.174.00 INFO 2025-06-26 15:44:03,470 logs2netcdfs.py download_process_logs():739 [1] src_dir = /Volumes/AUVCTD/missionlogs/2010/2010174/2010.174.00 INFO 2025-06-26 15:44:03,470 logs2netcdfs.py download_process_logs():768 [1] Rsyncing /Volumes/AUVCTD/missionlogs/2010/2010174/2010.174.00 to /data/auv_data/dorado/missionlogs/2010.174.00 INFO 2025-06-26 15:44:10,666 logs2netcdfs.py download_process_logs():779 [1] Processing mission: dorado 2010.174.00 INFO 2025-06-26 15:44:10,666 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.174.00/ctdDriver.log (23952396 bytes) WARNING 2025-06-26 15:44:11,855 logs2netcdfs.py _read_data():216 [1] unpack requires a buffer of 8 bytes, b = b'\n' at record 249497, for time in file /data/auv_data/dorado/missionlogs/2010.174.00/ctdDriver.log INFO 2025-06-26 15:44:11,855 logs2netcdfs.py _read_data():224 [1] bytes read = 23952403 file size = 23952396 INFO 2025-06-26 15:44:11,855 logs2netcdfs.py _read_data():229 [1] Tried to read 8 bytes, but only 7 bytes remaining INFO 2025-06-26 15:44:11,855 logs2netcdfs.py _read_data():235 [1] Successfully unpacked 249497 records WARNING 2025-06-26 15:44:11,882 logs2netcdfs.py _create_variable():536 [1] conductivity: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (249498,) and arg 1 with shape (249497,). INFO 2025-06-26 15:44:11,882 logs2netcdfs.py _create_variable():537 [1] len(data) (249497) does not match shape of conductivity.shape[0] (249498) WARNING 2025-06-26 15:44:11,882 logs2netcdfs.py _create_variable():544 [1] conductivity data is short by one, appending the last value: 3.8384129195721517 WARNING 2025-06-26 15:44:11,907 logs2netcdfs.py _create_variable():536 [1] temperature: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (249498,) and arg 1 with shape (249497,). INFO 2025-06-26 15:44:11,907 logs2netcdfs.py _create_variable():537 [1] len(data) (249497) does not match shape of temperature.shape[0] (249498) WARNING 2025-06-26 15:44:11,907 logs2netcdfs.py _create_variable():544 [1] temperature data is short by one, appending the last value: 11.531296456160248 WARNING 2025-06-26 15:44:11,932 logs2netcdfs.py _create_variable():536 [1] cond_frequency: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (249498,) and arg 1 with shape (249497,). INFO 2025-06-26 15:44:11,932 logs2netcdfs.py _create_variable():537 [1] len(data) (249497) does not match shape of cond_frequency.shape[0] (249498) WARNING 2025-06-26 15:44:11,932 logs2netcdfs.py _create_variable():544 [1] cond_frequency data is short by one, appending the last value: 5591.640625 WARNING 2025-06-26 15:44:11,957 logs2netcdfs.py _create_variable():536 [1] temp_frequency: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (249498,) and arg 1 with shape (249497,). INFO 2025-06-26 15:44:11,957 logs2netcdfs.py _create_variable():537 [1] len(data) (249497) does not match shape of temp_frequency.shape[0] (249498) WARNING 2025-06-26 15:44:11,957 logs2netcdfs.py _create_variable():544 [1] temp_frequency data is short by one, appending the last value: 4208.65234375 WARNING 2025-06-26 15:44:11,982 logs2netcdfs.py _create_variable():536 [1] spare1: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (249498,) and arg 1 with shape (249497,). INFO 2025-06-26 15:44:11,982 logs2netcdfs.py _create_variable():537 [1] len(data) (249497) does not match shape of spare1.shape[0] (249498) WARNING 2025-06-26 15:44:11,983 logs2netcdfs.py _create_variable():544 [1] spare1 data is short by one, appending the last value: 0.0 WARNING 2025-06-26 15:44:12,007 logs2netcdfs.py _create_variable():536 [1] spare2: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (249498,) and arg 1 with shape (249497,). INFO 2025-06-26 15:44:12,008 logs2netcdfs.py _create_variable():537 [1] len(data) (249497) does not match shape of spare2.shape[0] (249498) WARNING 2025-06-26 15:44:12,008 logs2netcdfs.py _create_variable():544 [1] spare2 data is short by one, appending the last value: 0.0 WARNING 2025-06-26 15:44:12,033 logs2netcdfs.py _create_variable():536 [1] humidity: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (249498,) and arg 1 with shape (249497,). INFO 2025-06-26 15:44:12,034 logs2netcdfs.py _create_variable():537 [1] len(data) (249497) does not match shape of humidity.shape[0] (249498) WARNING 2025-06-26 15:44:12,034 logs2netcdfs.py _create_variable():544 [1] humidity data is short by one, appending the last value: 0.9072039072039072 WARNING 2025-06-26 15:44:12,060 logs2netcdfs.py _create_variable():536 [1] flow1: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (249498,) and arg 1 with shape (249497,). INFO 2025-06-26 15:44:12,060 logs2netcdfs.py _create_variable():537 [1] len(data) (249497) does not match shape of flow1.shape[0] (249498) WARNING 2025-06-26 15:44:12,060 logs2netcdfs.py _create_variable():544 [1] flow1 data is short by one, appending the last value: 0.0 WARNING 2025-06-26 15:44:12,086 logs2netcdfs.py _create_variable():536 [1] rhodamine: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (249498,) and arg 1 with shape (249497,). INFO 2025-06-26 15:44:12,086 logs2netcdfs.py _create_variable():537 [1] len(data) (249497) does not match shape of rhodamine.shape[0] (249498) WARNING 2025-06-26 15:44:12,086 logs2netcdfs.py _create_variable():544 [1] rhodamine data is short by one, appending the last value: 0.015873015873015872 WARNING 2025-06-26 15:44:12,111 logs2netcdfs.py _create_variable():536 [1] dissolvedO2: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (249498,) and arg 1 with shape (249497,). INFO 2025-06-26 15:44:12,111 logs2netcdfs.py _create_variable():537 [1] len(data) (249497) does not match shape of dissolvedO2.shape[0] (249498) WARNING 2025-06-26 15:44:12,111 logs2netcdfs.py _create_variable():544 [1] dissolvedO2 data is short by one, appending the last value: 4.261294261294261 WARNING 2025-06-26 15:44:12,136 logs2netcdfs.py _create_variable():536 [1] salinity: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (249498,) and arg 1 with shape (249497,). INFO 2025-06-26 15:44:12,136 logs2netcdfs.py _create_variable():537 [1] len(data) (249497) does not match shape of salinity.shape[0] (249498) WARNING 2025-06-26 15:44:12,136 logs2netcdfs.py _create_variable():544 [1] salinity data is short by one, appending the last value: 33.8477165095205 INFO 2025-06-26 15:44:12,444 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/dorado/missionlogs/2010.174.00/ctdDriver.log: [249497] INFO 2025-06-26 15:44:12,510 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.174.00/ctdDriver2.log (23958623 bytes) INFO 2025-06-26 15:44:14,270 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.174.00/gps.log (112892 bytes) INFO 2025-06-26 15:44:14,291 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.174.00/hydroscatlog.log (20960290 bytes) INFO 2025-06-26 15:44:16,491 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.174.00/navigation.log (73592478 bytes) INFO 2025-06-26 15:44:21,865 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.174.00/isuslog.log (1551125 bytes) INFO 2025-06-26 15:44:22,012 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/dorado/missionlogs/2010.174.00/isuslog.log: [ 1 2 3 4 5 6 7 8 9 11 12 13 14 15 16 17 18 19] INFO 2025-06-26 15:44:22,017 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.174.00/parosci.log (24455126 bytes) INFO 2025-06-26 15:44:24,124 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.174.00/tailCone.log (14976379 bytes) INFO 2025-06-26 15:44:25,960 logs2netcdfs.py download_process_logs():807 [1] Time to process: 15.29 seconds INFO 2025-06-26 15:44:25,960 process.py download_process():198 [1] Processing file /data/auv_data/dorado/missionlogs/2010.174.00/lopc.bin (283319710 bytes) INFO 2025-06-26 15:44:25,960 lopcToNetCDF.py main():2297 [1] Processing begun: Thu Jun 26 15:44:25 2025 INFO 2025-06-26 15:44:25,960 lopcToNetCDF.py constructTimestampList():1296 [1] parosci_nc = /data/auv_data/dorado/missionnetcdfs/2010.174.00/parosci.nc INFO 2025-06-26 15:44:25,960 lopcToNetCDF.py constructTimestampList():1297 [1] Using NetCDF4 to get start and end epoch seconds for this mission from this URL: INFO 2025-06-26 15:44:25,960 lopcToNetCDF.py constructTimestampList():1300 [1] /data/auv_data/dorado/missionnetcdfs/2010.174.00/parosci.nc INFO 2025-06-26 15:44:25,964 lopcToNetCDF.py constructTimestampList():1317 [1] From associated parosci.nc file: sensor_on_time = 1277331847.9, sensor_off_time = 1277394264.1 INFO 2025-06-26 15:44:25,964 lopcToNetCDF.py constructTimestampList():1322 [1] Duration is 62416 seconds. Expecting to read 124832 L frames from the lopc.bin file. INFO 2025-06-26 15:44:25,964 lopcToNetCDF.py constructTimestampList():1330 [1] recCount not passed in, assuming we'll have 124832 records from the lopc.bin file. INFO 2025-06-26 15:44:26,684 lopcToNetCDF.py main():2321 [1] Examined sibling parosci.nc file to find startTime = 2010-06-23 22:24:07 Z and endTime = 2010-06-24 15:44:24 Z with 124832 records expected to be read from lopc.bin INFO 2025-06-26 15:44:26,684 lopcToNetCDF.py unpackLOPCbin():723 [1] >>> Unpacking LOPC data from /data/auv_data/dorado/missionlogs/2010.174.00/lopc.bin INFO 2025-06-26 15:44:26,684 lopcToNetCDF.py unpackLOPCbin():724 [1] >>> Will write to NetCDF file /data/auv_data/dorado/missionnetcdfs/2010.174.00/lopc.nc INFO 2025-06-26 15:44:26,685 lopcToNetCDF.py openNetCDFFile():1861 [1] Will output NetCDF file to /data/auv_data/dorado/missionnetcdfs/2010.174.00/lopc.nc INFO 2025-06-26 15:44:26,685 lopcToNetCDF.py openNetCDFFile():1887 [1] missionName = 2010.174.00 INFO 2025-06-26 15:44:26,685 lopcToNetCDF.py openNetCDFFile():1910 [1] Writing bin axis for len(self.dataStructure['binSizeList']) = 994 ERROR 2025-06-26 15:44:26,694 process.py download_process():223 [1] UnexpectedAreaOfCode: Encountered unexpected area of code - lopc.nc file is probably corrupt INFO 2025-06-26 15:44:26,696 process.py calibrate():227 [1] Calibration steps for 2010.174.00 INFO 2025-06-26 15:44:27,144 calibrate.py _nudge_pos():1680 [1] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-06-26 15:44:27,146 calibrate.py _nudge_pos():1711 [1] - - - 0 0.00 - - - INFO 2025-06-26 15:44:28,332 calibrate.py _nudge_pos():1806 [1] 155: 0.170 0.0000333 -0.0004264 805 2.68 1.841 -29.483 2010-06-23T22:29:22.127123456 INFO 2025-06-26 15:44:28,813 calibrate.py _nudge_pos():1806 [1] 203: 0.160 0.0018161 -0.0083589 13835 46.11 5.843 -33.589 2010-06-23T23:16:16.134350592 INFO 2025-06-26 15:44:29,087 calibrate.py _nudge_pos():1806 [1] 230: 0.160 -0.0000273 -0.0000002 30 0.10 -41.912 -0.436 2010-06-23T23:16:48.132158464 INFO 2025-06-26 15:44:29,420 calibrate.py _nudge_pos():1806 [1] 263: 0.160 -0.0016384 -0.0002084 9364 31.21 -7.785 -1.237 2010-06-23T23:48:34.131588608 INFO 2025-06-26 15:44:29,830 calibrate.py _nudge_pos():1806 [1] 304: 0.170 -0.0000482 -0.0000574 25 0.08 -89.441 -132.952 2010-06-23T23:49:19.128506112 INFO 2025-06-26 15:44:29,861 calibrate.py _nudge_pos():1806 [1] 307: 0.160 -0.0012798 -0.0086788 14315 47.71 -3.979 -33.705 2010-06-24T00:37:04.132240128 INFO 2025-06-26 15:44:30,102 calibrate.py _nudge_pos():1806 [1] 331: 0.170 -0.0000552 0.0001103 115 0.38 -21.564 53.784 2010-06-24T00:37:50.129089024 INFO 2025-06-26 15:44:30,112 calibrate.py _nudge_pos():1806 [1] 332: 0.160 -0.0005123 -0.0001682 9130 30.43 -2.496 -1.024 2010-06-24T01:08:16.133999104 INFO 2025-06-26 15:44:30,371 calibrate.py _nudge_pos():1806 [1] 358: 0.160 -0.0000126 0.0000384 15 0.05 -39.961 152.428 2010-06-24T01:08:44.132081152 INFO 2025-06-26 15:44:30,540 calibrate.py _nudge_pos():1806 [1] 375: 0.170 0.0016842 -0.0087478 13100 43.66 5.720 -37.124 2010-06-24T01:52:40.131502848 INFO 2025-06-26 15:44:31,128 calibrate.py _nudge_pos():1806 [1] 433: 0.170 -0.0016804 -0.0025867 7004 23.35 -10.675 -20.530 2010-06-24T02:16:58.131622912 INFO 2025-06-26 15:44:31,522 calibrate.py _nudge_pos():1806 [1] 472: 0.170 -0.0017714 -0.0016013 8825 29.41 -8.934 -10.088 2010-06-24T02:47:01.128109312 INFO 2025-06-26 15:44:32,021 calibrate.py _nudge_pos():1806 [1] 521: 0.170 0.0014497 -0.0082243 13995 46.65 4.611 -32.670 2010-06-24T03:34:28.133075968 INFO 2025-06-26 15:44:32,556 calibrate.py _nudge_pos():1806 [1] 573: 0.170 -0.0015209 -0.0002106 9375 31.25 -7.219 -1.249 2010-06-24T04:06:34.131136256 INFO 2025-06-26 15:44:32,792 calibrate.py _nudge_pos():1806 [1] 596: 0.180 -0.0000016 -0.0000221 15 0.05 -5.229 -87.949 2010-06-24T04:06:59.129423616 INFO 2025-06-26 15:44:33,001 calibrate.py _nudge_pos():1806 [1] 616: 0.170 -0.0015351 -0.0093231 13665 45.55 -4.999 -37.930 2010-06-24T04:52:52.130830080 INFO 2025-06-26 15:44:33,539 calibrate.py _nudge_pos():1806 [1] 666: 0.180 -0.0003234 -0.0000605 9295 30.98 -1.548 -0.362 2010-06-24T05:24:40.130123264 INFO 2025-06-26 15:44:33,912 calibrate.py _nudge_pos():1806 [1] 702: 0.180 0.0013174 -0.0088943 12275 40.91 4.775 -40.283 2010-06-24T06:06:10.129546752 INFO 2025-06-26 15:44:33,935 calibrate.py _nudge_pos():1806 [1] 704: 0.180 0.0001168 -0.0001215 35 0.11 152.806 -198.635 2010-06-24T06:06:18.128998400 INFO 2025-06-26 15:44:34,409 calibrate.py _nudge_pos():1806 [1] 749: 0.170 -0.0023541 -0.0033148 7480 24.93 -14.005 -24.638 2010-06-24T06:31:58.133500928 INFO 2025-06-26 15:44:34,994 calibrate.py _nudge_pos():1806 [1] 805: 0.180 -0.0027364 -0.0026353 9265 30.88 -13.145 -15.814 2010-06-24T07:03:46.132794112 INFO 2025-06-26 15:44:35,102 calibrate.py _nudge_pos():1806 [1] 815: 0.180 0.0000053 -0.0000410 45 0.15 5.318 -51.741 2010-06-24T07:04:04.131560960 INFO 2025-06-26 15:44:35,240 calibrate.py _nudge_pos():1806 [1] 828: 0.180 0.0008445 -0.0085455 12120 40.40 3.101 -39.198 2010-06-24T07:44:40.134683392 INFO 2025-06-26 15:44:35,435 calibrate.py _nudge_pos():1806 [1] 846: 0.180 0.0000791 -0.0000315 40 0.13 90.324 -44.959 2010-06-24T07:45:05.132971008 INFO 2025-06-26 15:44:35,730 calibrate.py _nudge_pos():1806 [1] 874: 0.180 -0.0012294 -0.0001102 9310 31.03 -5.876 -0.658 2010-06-24T08:16:34.133565696 INFO 2025-06-26 15:44:36,356 calibrate.py _nudge_pos():1806 [1] 933: 0.180 -0.0013494 -0.0096244 14240 47.46 -4.217 -37.574 2010-06-24T09:05:00.134490880 INFO 2025-06-26 15:44:36,368 calibrate.py _nudge_pos():1806 [1] 934: 0.180 -0.0000163 -0.0000239 70 0.23 -10.511 -19.247 2010-06-24T09:05:14.133531904 INFO 2025-06-26 15:44:36,893 calibrate.py _nudge_pos():1806 [1] 984: 0.180 -0.0004554 -0.0000094 9365 31.21 -2.163 -0.056 2010-06-24T09:37:16.131865856 INFO 2025-06-26 15:44:37,460 calibrate.py _nudge_pos():1806 [1] 1037: 0.180 0.0021566 -0.0095607 12730 42.43 7.537 -41.753 2010-06-24T10:20:34.133890560 INFO 2025-06-26 15:44:37,831 calibrate.py _nudge_pos():1806 [1] 1072: 0.190 -0.0019934 -0.0029362 7209 24.03 -12.303 -22.642 2010-06-24T10:45:10.132777728 INFO 2025-06-26 15:44:38,398 calibrate.py _nudge_pos():1806 [1] 1124: 0.180 -0.0024388 -0.0021943 9945 33.15 -10.915 -12.267 2010-06-24T11:19:10.133028352 INFO 2025-06-26 15:44:38,432 calibrate.py _nudge_pos():1806 [1] 1127: 0.180 -0.0000620 -0.0000492 80 0.26 -34.953 -34.598 2010-06-24T11:19:28.131795200 INFO 2025-06-26 15:44:38,993 calibrate.py _nudge_pos():1806 [1] 1179: 0.180 0.0014930 -0.0084077 12974 43.25 5.122 -36.025 2010-06-24T12:03:34.130531840 INFO 2025-06-26 15:44:39,049 calibrate.py _nudge_pos():1806 [1] 1184: 0.190 0.0000076 0.0000015 90 0.30 3.815 0.920 2010-06-24T12:03:56.129024768 INFO 2025-06-26 15:44:39,623 calibrate.py _nudge_pos():1806 [1] 1232: 0.190 -0.0018531 -0.0003173 9255 30.85 -8.909 -1.906 2010-06-24T12:35:34.129003008 INFO 2025-06-26 15:44:40,212 calibrate.py _nudge_pos():1806 [1] 1282: 0.190 -0.0016326 -0.0093883 14214 47.38 -5.111 -36.717 2010-06-24T13:23:46.130887168 INFO 2025-06-26 15:44:40,706 calibrate.py _nudge_pos():1806 [1] 1320: 0.190 -0.0009469 -0.0001679 9265 30.88 -4.547 -1.008 2010-06-24T13:55:16.131413504 INFO 2025-06-26 15:44:41,111 calibrate.py _nudge_pos():1806 [1] 1350: 0.180 0.0022086 -0.0096590 13565 45.21 7.244 -39.586 2010-06-24T14:40:58.133573376 INFO 2025-06-26 15:44:41,631 calibrate.py _nudge_pos():1806 [1] 1393: 0.190 0.0003824 -0.0019493 2970 9.90 5.730 -36.498 2010-06-24T14:51:34.130004736 INFO 2025-06-26 15:44:42,199 calibrate.py _nudge_pos():1806 [1] 1444: 0.190 -0.0010599 -0.0009110 4670 15.56 -10.100 -10.846 2010-06-24T15:07:58.132595712 INFO 2025-06-26 15:44:42,587 calibrate.py _nudge_pos():1806 [1] 1478: 0.190 -0.0011506 -0.0011068 4875 16.25 -10.505 -12.623 2010-06-24T15:24:46.133542912 INFO 2025-06-26 15:44:42,621 calibrate.py _nudge_pos():1806 [1] 1481: 0.190 0.0000108 0.0000275 75 0.25 6.512 20.630 2010-06-24T15:25:03.132378624 INFO 2025-06-26 15:44:43,161 calibrate.py _nudge_pos():1806 [1] 1530: 0.190 -0.0014072 -0.0013199 5435 18.11 -11.524 -13.502 2010-06-24T15:43:58.134625536 INFO 2025-06-26 15:44:43,444 calibrate.py _nudge_pos():1862 [1] 1505: - - - 5 0.01 - - INFO 2025-06-26 15:44:43,444 calibrate.py _nudge_pos():1868 [1] Points in final series = 311816 WARNING 2025-06-26 15:44:43,837 calibrate.py _depth_process():2193 [1] Expected sample_rate to be 10 Hz, instead it's 8.33 Hz INFO 2025-06-26 15:44:46,117 calibrate.py _geometric_depth_correction():3423 [1] hs2: d_beg_time_diff: 7 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:44:48,411 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 43 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 15:44:50,261 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 43 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 15:44:50,265 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd1_salinity'] in 2010.174.00/ctd1.nc INFO 2025-06-26 15:44:50,267 calibrate.py _range_qc_combined_nc():898 [1] Setting 0 ctd1_salinity values to NaN INFO 2025-06-26 15:44:50,267 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd1_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:44:50,267 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd1 INFO 2025-06-26 15:44:52,572 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 27 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:44:54,451 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 27 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:44:54,455 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd2_salinity'] in 2010.174.00/ctd2.nc INFO 2025-06-26 15:44:54,457 calibrate.py _range_qc_combined_nc():898 [1] Setting 0 ctd2_salinity values to NaN INFO 2025-06-26 15:44:54,457 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd2_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:44:54,457 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd2 ERROR 2025-06-26 15:44:56,744 calibrate.py process_logs():3542 [1] Error processing biolume: biolume has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.174.00 ERROR 2025-06-26 15:44:56,744 calibrate.py process_logs():3542 [1] Error processing lopc: lopc has no time coordinate - likely an incomplete lopc.nc file in missionlogs/2010.174.00 ERROR 2025-06-26 15:44:56,744 calibrate.py process_logs():3542 [1] Error processing ecopuck: ecopuck has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.174.00 INFO 2025-06-26 15:44:56,984 calibrate.py write_netcdf():3508 [1] Writing calibrated instrument data to /data/auv_data/dorado/missionnetcdfs/2010.174.00/dorado_2010.174.00_cal.nc INFO 2025-06-26 15:44:57,176 calibrate.py write_netcdf():3512 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_salinity_onboard, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_salinity, ctd2_salinity_onboard, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_time, isus_nitrate, isus_quality, isus_temp, isus_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, tailcone_propRpm, tailcone_time, time INFO 2025-06-26 15:44:57,181 process.py align():251 [1] Alignment steps for 2010.174.00 INFO 2025-06-26 15:44:57,221 align.py process_cal():139 [1] Processing dorado_2010.174.00_cal.nc from /data/auv_data/dorado/missionnetcdfs/2010.174.00 INFO 2025-06-26 15:44:57,303 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:44:57,312 align.py process_cal():249 [1] navigation_roll: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:44:57,513 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:44:57,525 align.py process_cal():249 [1] navigation_pitch: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:44:57,730 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:44:57,742 align.py process_cal():249 [1] navigation_yaw: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:44:57,863 align.py process_cal():161 [1] Skipping navigation_posx INFO 2025-06-26 15:44:57,864 align.py process_cal():161 [1] Skipping navigation_posy INFO 2025-06-26 15:44:57,939 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:44:57,950 align.py process_cal():249 [1] navigation_mWaterSpeed: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:44:58,143 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:44:58,153 align.py process_cal():249 [1] hs2_bbp420: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:44:58,319 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:44:58,329 align.py process_cal():249 [1] hs2_bbp700: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:44:58,500 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:44:58,509 align.py process_cal():249 [1] hs2_fl700: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:44:58,674 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:44:58,683 align.py process_cal():249 [1] ctd1_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:44:58,852 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:44:58,861 align.py process_cal():249 [1] ctd1_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:44:59,027 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:44:59,036 align.py process_cal():249 [1] ctd1_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:44:59,204 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:44:59,213 align.py process_cal():249 [1] ctd1_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:44:59,378 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:44:59,387 align.py process_cal():249 [1] ctd1_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:44:59,558 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:44:59,567 align.py process_cal():249 [1] ctd1_salinity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:44:59,733 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:44:59,742 align.py process_cal():249 [1] ctd1_dissolvedO2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:44:59,912 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:44:59,921 align.py process_cal():249 [1] ctd1_oxygen_mll: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:45:00,091 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:45:00,101 align.py process_cal():249 [1] ctd1_oxygen_umolkg: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:45:00,266 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:45:00,275 align.py process_cal():249 [1] ctd1_flow1: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:45:00,452 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:45:00,461 align.py process_cal():249 [1] ctd1_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:45:00,631 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:45:00,640 align.py process_cal():249 [1] ctd2_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:45:00,815 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:45:00,824 align.py process_cal():249 [1] ctd2_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:45:00,990 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:45:01,000 align.py process_cal():249 [1] ctd2_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:45:01,170 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:45:01,180 align.py process_cal():249 [1] ctd2_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:45:01,348 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:45:01,359 align.py process_cal():249 [1] ctd2_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:45:01,527 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:45:01,537 align.py process_cal():249 [1] ctd2_salinity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:45:01,711 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:45:01,720 align.py process_cal():249 [1] ctd2_flow2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:45:01,890 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.174.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:45:01,899 align.py process_cal():249 [1] ctd2_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:45:02,099 align.py process_cal():249 [1] isus_nitrate: instrument_sample_rate_hz = 0.78 INFO 2025-06-26 15:45:02,222 align.py process_cal():249 [1] isus_temp: instrument_sample_rate_hz = 0.78 INFO 2025-06-26 15:45:02,348 align.py process_cal():249 [1] isus_quality: instrument_sample_rate_hz = 0.78 INFO 2025-06-26 15:45:02,476 align.py process_cal():249 [1] tailcone_propRpm: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:45:02,601 align.py write_netcdf():337 [1] Writing aligned data to /data/auv_data/dorado/missionnetcdfs/2010.174.00/dorado_2010.174.00_align.nc INFO 2025-06-26 15:45:02,746 align.py write_netcdf():342 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_latitude, ctd1_longitude, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_salinity_onboard, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_latitude, ctd2_longitude, ctd2_salinity, ctd2_salinity_onboard, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_latitude, hs2_longitude, hs2_time, isus_depth, isus_latitude, isus_longitude, isus_nitrate, isus_quality, isus_temp, isus_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-06-26 15:45:02,748 process.py resample():273 [1] Resampling steps for 2010.174.00 INFO 2025-06-26 15:45:02,748 resample.py resample_mission():1185 [1] Using depth_threshold = 10.00 m INFO 2025-06-26 15:45:02,780 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.174.00/dorado_2010.174.00_align.nc mission netCDF file INFO 2025-06-26 15:45:02,787 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.174.00/dorado_2010.174.00_align.nc mission netCDF file INFO 2025-06-26 15:45:02,790 resample.py get_mission_start_end():1145 [1] navigation: 2010-06-23T22:24:58.655172352 to 2010-06-24T15:44:24.132844544 (0 days 00:00:00 before mission_end) INFO 2025-06-26 15:45:02,792 resample.py get_mission_start_end():1145 [1] hs2 : 2010-06-23T22:24:15.198149376 to 2010-06-24T15:44:23.932858112 (0 days 00:00:00.199986432 before mission_end) INFO 2025-06-26 15:45:02,795 resample.py get_mission_start_end():1145 [1] ctd1 : 2010-06-23T22:24:51.525660672 to 2010-06-24T15:44:24.132844544 (0 days 00:00:00 before mission_end) INFO 2025-06-26 15:45:02,797 resample.py get_mission_start_end():1145 [1] ctd2 : 2010-06-23T22:24:35.026791168 to 2010-06-24T15:44:24.052849920 (0 days 00:00:00.079994624 before mission_end) INFO 2025-06-26 15:45:02,799 resample.py get_mission_start_end():1145 [1] isus : 2010-06-23T22:25:07.424571648 to 2010-06-24T15:44:23.892860928 (0 days 00:00:00.239983616 before mission_end) INFO 2025-06-26 15:45:02,801 resample.py get_mission_start_end():1145 [1] tailcone : 2010-06-23T22:24:09.098567168 to 2010-06-24T15:44:24.092847360 (0 days 00:00:00.039997184 before mission_end) INFO 2025-06-26 15:45:02,802 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.174.00/dorado_2010.174.00_align.nc mission netCDF file INFO 2025-06-26 15:45:02,803 resample.py resample_coordinates():249 [1] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:03,437 resample.py resample_variable():1031 [1] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:03,537 resample.py resample_variable():1031 [1] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:03,634 resample.py resample_variable():1031 [1] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:03,731 resample.py resample_variable():1031 [1] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:03,816 resample.py resample_variable():1031 [1] Resampling hs2_bbp420 with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:03,898 resample.py resample_variable():1031 [1] Resampling hs2_bbp700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:03,980 resample.py resample_variable():1031 [1] Resampling hs2_fl700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:04,063 resample.py resample_variable():1031 [1] Resampling ctd1_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:04,141 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:04,219 resample.py resample_variable():1031 [1] Resampling ctd1_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:04,296 resample.py resample_variable():1031 [1] Resampling ctd1_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:04,373 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:04,450 resample.py resample_variable():1031 [1] Resampling ctd1_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:04,527 resample.py resample_variable():1031 [1] Resampling ctd1_dissolvedO2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:04,605 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_mll with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:04,682 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_umolkg with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:04,760 resample.py resample_variable():1031 [1] Resampling ctd1_flow1 with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:04,843 resample.py resample_variable():1031 [1] Resampling ctd2_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:04,927 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:05,009 resample.py resample_variable():1031 [1] Resampling ctd2_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:05,089 resample.py resample_variable():1031 [1] Resampling ctd2_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:05,170 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:05,251 resample.py resample_variable():1031 [1] Resampling ctd2_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:05,331 resample.py resample_variable():1031 [1] Resampling ctd2_flow2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:05,363 resample.py resample_variable():1031 [1] Resampling isus_nitrate with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:05,388 resample.py resample_variable():1031 [1] Resampling isus_temp with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:05,414 resample.py resample_variable():1031 [1] Resampling isus_quality with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:05,505 resample.py resample_variable():1031 [1] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-06-26 15:45:05,963 resample.py resample_mission():1297 [1] Saved resampled mission to /data/auv_data/dorado/missionnetcdfs/2010.174.00/dorado_2010.174.00_1S.nc INFO 2025-06-26 15:45:08,968 create_products.py _get_best_ctd():380 [1] ctdToUse = ctd1 INFO 2025-06-26 15:45:19,696 create_products.py gulper_odv():522 [1] Wrote 10 Gulper data lines to /data/auv_data/dorado/missionodvs/2010.174.00/dorado_2010.174.00_1S_Gulper.txt INFO 2025-06-26 15:45:19,696 process.py archive():337 [1] Archiving steps for 2010.174.00 INFO 2025-06-26 15:45:19,696 process.py archive():347 [1] nc_file_base = /data/auv_data/dorado/missionnetcdfs/2010.174.00/dorado_2010.174.00, BASE_PATH = /data/auv_data INFO 2025-06-26 15:45:19,697 archive.py copy_to_AUVTCD():60 [1] Archiving /data/auv_data/dorado/missionnetcdfs/2010.174.00/dorado_2010.174.00 files to /Volumes/AUVCTD/surveys/2010/netcdf INFO 2025-06-26 15:45:19,698 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.174.00_1S.nc INFO 2025-06-26 15:45:19,740 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.174.00/dorado_2010.174.00_1S.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:45:19,741 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.174.00_cal.nc INFO 2025-06-26 15:45:20,038 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.174.00/dorado_2010.174.00_cal.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:45:20,039 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.174.00_align.nc INFO 2025-06-26 15:45:20,328 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.174.00/dorado_2010.174.00_align.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:45:20,403 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.174.00/ctdDriver.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010174/2010.174.00 done. INFO 2025-06-26 15:45:20,478 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.174.00/ctdDriver2.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010174/2010.174.00 done. INFO 2025-06-26 15:45:20,483 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.174.00/gps.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010174/2010.174.00 done. INFO 2025-06-26 15:45:20,544 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.174.00/hydroscatlog.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010174/2010.174.00 done. INFO 2025-06-26 15:45:20,744 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.174.00/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010174/2010.174.00 done. INFO 2025-06-26 15:45:20,754 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.174.00/isuslog.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010174/2010.174.00 done. INFO 2025-06-26 15:45:20,823 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.174.00/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010174/2010.174.00 done. INFO 2025-06-26 15:45:20,879 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.174.00/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010174/2010.174.00 done. INFO 2025-06-26 15:45:20,884 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.174.00/lopc.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010174/2010.174.00 done. INFO 2025-06-26 15:45:20,884 archive.py copy_to_AUVTCD():116 [1] Archiving product files INFO 2025-06-26 15:45:20,886 archive.py copy_to_AUVTCD():133 [1] Removing /Volumes/AUVCTD/surveys/2010/odv/dorado_2010.174.00_1S_Gulper.txt INFO 2025-06-26 15:45:20,891 archive.py copy_to_AUVTCD():136 [1] copyfile /data/auv_data/dorado/missionodvs/2010.174.00/dorado_2010.174.00_1S_Gulper.txt /Volumes/AUVCTD/surveys/2010/odv done. INFO 2025-06-26 15:45:20,891 archive.py copy_to_AUVTCD():161 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.174.00/dorado_2010.174.00_processing.log /Volumes/AUVCTD/surveys/2010/netcdf