INFO 2025-06-26 06:06:37,786 process.py process_mission():429 [1] commandline = src/data/process_dorado.py --start_year 2003 --end_year 2014 --num_cores 1 -v --noinput --clobber INFO 2025-06-26 06:06:37,786 process.py process_mission():434 [1] dorado_info[mission]["comment"] = Hardware failure, no ctdDriver2 data. Flow was bad for both CTDs. Re-portaled 8/19/05 Failed because no ctdDriver2.cfg for 296.03. - ctdToUse = ctd1 INFO 2025-06-26 06:06:37,787 process.py process_mission():449 [1] Processing BIOLUME mission 2004.296.04 by user docker_user on host 671049448ece INFO 2025-06-26 06:06:37,787 process.py download_process():165 [1] Download and processing steps for 2004.296.04 INFO 2025-06-26 06:06:37,787 logs2netcdfs.py download_process_logs():739 [1] src_dir = /Volumes/AUVCTD/missionlogs/2004/2004296/2004.296.04 INFO 2025-06-26 06:06:37,787 logs2netcdfs.py download_process_logs():768 [1] Rsyncing /Volumes/AUVCTD/missionlogs/2004/2004296/2004.296.04 to /data/auv_data/dorado/missionlogs/2004.296.04 INFO 2025-06-26 06:06:39,770 logs2netcdfs.py download_process_logs():779 [1] Processing mission: dorado 2004.296.04 INFO 2025-06-26 06:06:39,771 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2004.296.04/ctdDriver.log (3498307 bytes) INFO 2025-06-26 06:06:40,034 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2004.296.04/gps.log (31244 bytes) INFO 2025-06-26 06:06:40,046 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2004.296.04/hydroscatlog.log (2388434 bytes) INFO 2025-06-26 06:06:40,326 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/dorado/missionlogs/2004.296.04/hydroscatlog.log: [13025] INFO 2025-06-26 06:06:40,333 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2004.296.04/navigation.log (7751491 bytes) INFO 2025-06-26 06:06:40,900 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2004.296.04/isuslog.log (203893 bytes) INFO 2025-06-26 06:06:40,924 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2004.296.04/parosci.log (2389862 bytes) INFO 2025-06-26 06:06:41,127 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2004.296.04/tailCone.log (2390011 bytes) INFO 2025-06-26 06:06:41,428 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2004.296.04/biolume.log (2711708 bytes) INFO 2025-06-26 06:06:41,692 logs2netcdfs.py write_variables():575 [1] Expanding original timeTag to time60Hz variable for raw data INFO 2025-06-26 06:06:41,836 logs2netcdfs.py download_process_logs():807 [1] Time to process: 2.07 seconds WARNING 2025-06-26 06:06:41,836 process.py download_process():196 [1] No lopc.bin file for 2004.296.04 INFO 2025-06-26 06:06:41,836 process.py calibrate():227 [1] Calibration steps for 2004.296.04 INFO 2025-06-26 06:06:41,958 calibrate.py _nudge_pos():1680 [1] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-06-26 06:06:41,960 calibrate.py _nudge_pos():1711 [1] - - - 0 0.00 - - - INFO 2025-06-26 06:06:42,339 calibrate.py _nudge_pos():1806 [1] 59: 0.070 0.0000268 -0.0000120 75 0.25 16.152 -9.019 2004-10-22T06:11:47.173595392 INFO 2025-06-26 06:06:42,459 calibrate.py _nudge_pos():1806 [1] 72: 0.090 0.0000965 -0.0006920 10807 36.03 0.398 -3.559 2004-10-22T06:48:01.174666112 INFO 2025-06-26 06:06:42,515 calibrate.py _nudge_pos():1806 [1] 78: 0.090 0.0000054 -0.0000367 70 0.23 3.468 -29.602 2004-10-22T06:48:20.173364608 INFO 2025-06-26 06:06:42,942 calibrate.py _nudge_pos():1806 [1] 124: 0.100 0.0007307 0.0005572 10335 34.45 3.152 2.998 2004-10-22T07:23:32.168683008 INFO 2025-06-26 06:06:43,455 calibrate.py _nudge_pos():1806 [1] 178: 0.090 0.0006372 0.0005331 10040 33.46 2.830 2.952 2004-10-22T07:57:55.167357952 INFO 2025-06-26 06:06:43,896 calibrate.py _nudge_pos():1806 [1] 226: 0.080 0.0005650 0.0004872 10325 34.41 2.441 2.624 2004-10-22T08:33:07.172675584 INFO 2025-06-26 06:06:44,368 calibrate.py _nudge_pos():1806 [1] 277: 0.080 0.0001410 0.0001016 2630 8.76 2.392 2.149 2004-10-22T08:42:43.173217024 INFO 2025-06-26 06:06:44,872 calibrate.py _nudge_pos():1806 [1] 330: 0.090 0.0001185 0.0001662 3430 11.43 1.541 2.694 2004-10-22T08:55:01.172660608 INFO 2025-06-26 06:06:45,747 calibrate.py _nudge_pos():1862 [1] 400: - - - 3 0.01 - - INFO 2025-06-26 06:06:45,747 calibrate.py _nudge_pos():1868 [1] Points in final series = 49680 WARNING 2025-06-26 06:06:45,790 calibrate.py _depth_process():2193 [1] Expected sample_rate to be 10 Hz, instead it's 5.00 Hz INFO 2025-06-26 06:06:51,306 calibrate.py _geometric_depth_correction():3423 [1] hs2: d_beg_time_diff: 4 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 06:06:51,705 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 20 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 06:06:52,005 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 20 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 06:06:52,007 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd1_salinity'] in 2004.296.04/ctd1.nc INFO 2025-06-26 06:06:52,008 calibrate.py _range_qc_combined_nc():898 [1] Setting 0 ctd1_salinity values to NaN INFO 2025-06-26 06:06:52,008 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd1_salinity', Range(min=30, max=40))] INFO 2025-06-26 06:06:52,008 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd1 INFO 2025-06-26 06:06:52,027 calibrate.py _biolume_process():3128 [1] Checking for non-monotonic increasing time60hz INFO 2025-06-26 06:06:52,540 calibrate.py _geometric_depth_correction():3423 [1] biolume: d_beg_time_diff: -1 seconds, d_end_time_diff: -1 seconds ERROR 2025-06-26 06:06:52,545 calibrate.py process_logs():3548 [1] Error processing biolume: missing variable "No variable named 'avg_biolume'. Variables on the dataset include ['time', 'rrr', 'cal_striing', 'pump', 'flow', 'humidity', 'temperature', 'time60hz', 'raw']" ERROR 2025-06-26 06:06:52,545 calibrate.py process_logs():3542 [1] Error processing lopc: lopc has no orig_data - likely a missing or zero-sized .log file in missionlogs/2004.296.04 ERROR 2025-06-26 06:06:52,545 calibrate.py process_logs():3542 [1] Error processing ecopuck: ecopuck has no orig_data - likely a missing or zero-sized .log file in missionlogs/2004.296.04 INFO 2025-06-26 06:06:52,588 calibrate.py write_netcdf():3508 [1] Writing calibrated instrument data to /data/auv_data/dorado/missionnetcdfs/2004.296.04/dorado_2004.296.04_cal.nc INFO 2025-06-26 06:06:52,646 calibrate.py write_netcdf():3512 [1] Data variables written: biolume_depth, biolume_flow, biolume_time, ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, hs2_bbp470, hs2_bbp676, hs2_depth, hs2_fl676, hs2_time, isus_nitrate, isus_quality, isus_temp, isus_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, tailcone_propRpm, tailcone_time, time INFO 2025-06-26 06:06:52,649 process.py align():251 [1] Alignment steps for 2004.296.04 INFO 2025-06-26 06:06:52,672 align.py process_cal():139 [1] Processing dorado_2004.296.04_cal.nc from /data/auv_data/dorado/missionnetcdfs/2004.296.04 INFO 2025-06-26 06:06:52,689 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 06:06:52,691 align.py process_cal():249 [1] navigation_roll: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 06:06:52,736 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 06:06:52,740 align.py process_cal():249 [1] navigation_pitch: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 06:06:52,783 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 06:06:52,787 align.py process_cal():249 [1] navigation_yaw: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 06:06:52,814 align.py process_cal():161 [1] Skipping navigation_posx INFO 2025-06-26 06:06:52,814 align.py process_cal():161 [1] Skipping navigation_posy INFO 2025-06-26 06:06:52,832 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 06:06:52,836 align.py process_cal():249 [1] navigation_mWaterSpeed: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 06:06:52,875 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2004.296.04_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=0.1397, y=-0.2794) INFO 2025-06-26 06:06:52,878 align.py process_cal():249 [1] hs2_bbp470: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 06:06:52,914 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2004.296.04_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=0.1397, y=-0.2794) INFO 2025-06-26 06:06:52,917 align.py process_cal():249 [1] hs2_bbp676: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 06:06:52,953 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2004.296.04_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=0.1397, y=-0.2794) INFO 2025-06-26 06:06:52,956 align.py process_cal():249 [1] hs2_fl676: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 06:06:52,993 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.296.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-06-26 06:06:52,996 align.py process_cal():249 [1] ctd1_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 06:06:53,032 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.296.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-06-26 06:06:53,035 align.py process_cal():249 [1] ctd1_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 06:06:53,076 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.296.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-06-26 06:06:53,079 align.py process_cal():249 [1] ctd1_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 06:06:53,115 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.296.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-06-26 06:06:53,118 align.py process_cal():249 [1] ctd1_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 06:06:53,153 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.296.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-06-26 06:06:53,156 align.py process_cal():249 [1] ctd1_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 06:06:53,191 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.296.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-06-26 06:06:53,194 align.py process_cal():249 [1] ctd1_dissolvedO2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 06:06:53,229 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.296.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-06-26 06:06:53,232 align.py process_cal():249 [1] ctd1_oxygen_mll: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 06:06:53,271 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.296.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-06-26 06:06:53,275 align.py process_cal():249 [1] ctd1_oxygen_umolkg: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 06:06:53,317 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.296.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-06-26 06:06:53,320 align.py process_cal():249 [1] ctd1_flow1: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 06:06:53,357 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.296.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-06-26 06:06:53,360 align.py process_cal():249 [1] ctd1_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 06:06:53,399 align.py process_cal():249 [1] isus_nitrate: instrument_sample_rate_hz = 0.64 INFO 2025-06-26 06:06:53,427 align.py process_cal():249 [1] isus_temp: instrument_sample_rate_hz = 0.64 INFO 2025-06-26 06:06:53,454 align.py process_cal():249 [1] isus_quality: instrument_sample_rate_hz = 0.64 INFO 2025-06-26 06:06:53,484 align.py process_cal():249 [1] biolume_flow: instrument_sample_rate_hz = 1.00 INFO 2025-06-26 06:06:53,515 align.py process_cal():249 [1] tailcone_propRpm: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 06:06:53,543 align.py write_netcdf():337 [1] Writing aligned data to /data/auv_data/dorado/missionnetcdfs/2004.296.04/dorado_2004.296.04_align.nc INFO 2025-06-26 06:06:53,593 align.py write_netcdf():342 [1] Data variables written: biolume_depth, biolume_flow, biolume_latitude, biolume_longitude, biolume_time, ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_latitude, ctd1_longitude, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, hs2_bbp470, hs2_bbp676, hs2_depth, hs2_fl676, hs2_latitude, hs2_longitude, hs2_time, isus_depth, isus_latitude, isus_longitude, isus_nitrate, isus_quality, isus_temp, isus_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-06-26 06:06:53,595 process.py resample():273 [1] Resampling steps for 2004.296.04 INFO 2025-06-26 06:06:53,596 resample.py resample_mission():1185 [1] Using depth_threshold = 10.00 m INFO 2025-06-26 06:06:53,616 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2004.296.04/dorado_2004.296.04_align.nc mission netCDF file INFO 2025-06-26 06:06:53,620 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2004.296.04/dorado_2004.296.04_align.nc mission netCDF file INFO 2025-06-26 06:06:53,621 resample.py get_mission_start_end():1145 [1] navigation: 2004-10-22T06:10:56.177089024 to 2004-10-22T08:56:32.776385280 (0 days 00:00:00.019998592 before mission_end) INFO 2025-06-26 06:06:53,623 resample.py get_mission_start_end():1145 [1] hs2 : 2004-10-22T06:10:39.808210432 to 2004-10-22T08:56:32.706390144 (0 days 00:00:00.089993728 before mission_end) INFO 2025-06-26 06:06:53,624 resample.py get_mission_start_end():1145 [1] ctd1 : 2004-10-22T06:10:56.027099136 to 2004-10-22T08:56:32.796383872 (0 days 00:00:00 before mission_end) INFO 2025-06-26 06:06:53,625 resample.py get_mission_start_end():1145 [1] isus : 2004-10-22T06:11:51.123324928 to 2004-10-22T08:56:31.936442880 (0 days 00:00:00.859940992 before mission_end) INFO 2025-06-26 06:06:53,626 resample.py get_mission_start_end():1145 [1] biolume : 2004-10-22T06:10:34.728524032 to 2004-10-22T08:56:31.866413312 (0 days 00:00:00.929970560 before mission_end) INFO 2025-06-26 06:06:53,628 resample.py get_mission_start_end():1145 [1] tailcone : 2004-10-22T06:10:35.488506368 to 2004-10-22T08:56:32.786384640 (0 days 00:00:00.009999232 before mission_end) INFO 2025-06-26 06:06:53,628 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2004.296.04/dorado_2004.296.04_align.nc mission netCDF file INFO 2025-06-26 06:06:53,629 resample.py resample_coordinates():249 [1] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:53,751 resample.py resample_variable():1031 [1] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:53,773 resample.py resample_variable():1031 [1] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:53,794 resample.py resample_variable():1031 [1] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:53,816 resample.py resample_variable():1031 [1] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:53,836 resample.py resample_variable():1031 [1] Resampling hs2_bbp470 with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:53,856 resample.py resample_variable():1031 [1] Resampling hs2_bbp676 with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:53,876 resample.py resample_variable():1031 [1] Resampling hs2_fl676 with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:53,895 resample.py resample_variable():1031 [1] Resampling ctd1_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:53,913 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:53,932 resample.py resample_variable():1031 [1] Resampling ctd1_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:53,950 resample.py resample_variable():1031 [1] Resampling ctd1_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:53,968 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:53,988 resample.py resample_variable():1031 [1] Resampling ctd1_dissolvedO2 with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:54,006 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_mll with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:54,027 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_umolkg with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:54,046 resample.py resample_variable():1031 [1] Resampling ctd1_flow1 with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:54,058 resample.py resample_variable():1031 [1] Resampling isus_nitrate with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:54,069 resample.py resample_variable():1031 [1] Resampling isus_temp with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:54,081 resample.py resample_variable():1031 [1] Resampling isus_quality with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:54,094 resample.py resample_variable():1031 [1] Resampling biolume_flow with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:54,117 resample.py resample_variable():1031 [1] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-06-26 06:06:54,259 resample.py resample_mission():1297 [1] Saved resampled mission to /data/auv_data/dorado/missionnetcdfs/2004.296.04/dorado_2004.296.04_1S.nc INFO 2025-06-26 06:06:55,144 create_products.py gulper_odv():401 [1] No gulper times found for 2004.296.04 INFO 2025-06-26 06:06:55,144 process.py archive():337 [1] Archiving steps for 2004.296.04 INFO 2025-06-26 06:06:55,144 process.py archive():347 [1] nc_file_base = /data/auv_data/dorado/missionnetcdfs/2004.296.04/dorado_2004.296.04, BASE_PATH = /data/auv_data INFO 2025-06-26 06:06:55,144 archive.py copy_to_AUVTCD():60 [1] Archiving /data/auv_data/dorado/missionnetcdfs/2004.296.04/dorado_2004.296.04 files to /Volumes/AUVCTD/surveys/2004/netcdf INFO 2025-06-26 06:06:55,145 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2004/netcdf/dorado_2004.296.04_1S.nc INFO 2025-06-26 06:06:55,160 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2004.296.04/dorado_2004.296.04_1S.nc /Volumes/AUVCTD/surveys/2004/netcdf done. INFO 2025-06-26 06:06:55,161 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2004/netcdf/dorado_2004.296.04_cal.nc INFO 2025-06-26 06:06:55,204 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2004.296.04/dorado_2004.296.04_cal.nc /Volumes/AUVCTD/surveys/2004/netcdf done. INFO 2025-06-26 06:06:55,205 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2004/netcdf/dorado_2004.296.04_align.nc INFO 2025-06-26 06:06:55,243 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2004.296.04/dorado_2004.296.04_align.nc /Volumes/AUVCTD/surveys/2004/netcdf done. INFO 2025-06-26 06:06:55,261 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2004.296.04/ctdDriver.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004296/2004.296.04 done. INFO 2025-06-26 06:06:55,266 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2004.296.04/gps.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004296/2004.296.04 done. INFO 2025-06-26 06:06:55,278 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2004.296.04/hydroscatlog.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004296/2004.296.04 done. INFO 2025-06-26 06:06:55,305 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2004.296.04/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004296/2004.296.04 done. INFO 2025-06-26 06:06:55,312 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2004.296.04/isuslog.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004296/2004.296.04 done. INFO 2025-06-26 06:06:55,325 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2004.296.04/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004296/2004.296.04 done. INFO 2025-06-26 06:06:55,339 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2004.296.04/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004296/2004.296.04 done. INFO 2025-06-26 06:06:55,371 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2004.296.04/biolume.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004296/2004.296.04 done. INFO 2025-06-26 06:06:55,372 archive.py copy_to_AUVTCD():116 [1] Archiving product files INFO 2025-06-26 06:06:55,372 archive.py copy_to_AUVTCD():161 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2004.296.04/dorado_2004.296.04_processing.log /Volumes/AUVCTD/surveys/2004/netcdf