Execution of AUVprocess_main version 1.86 at 2018-06-02T03:53:35Z on elvis
Matlab command executed: 
   AUVprocess_main('AUVCTD', 2003, ['308.02';'308.04'], 'ssds.shore.mbari.org', 0, 'ssdsLoads-new-ssds.jar', 0, '/mbari/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/', [], 'ctd1')
 
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Processing data from SSDS via DODS server
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*************************************************************************
Processing AUV mission: 2003.308.02
Data path is http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/
Calibration path is http://ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/
Processing results path (data and metadata) is /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
Processing DVL navigation data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/navigation.nc')
Creating vector time with 45366 elements.
Creating vector mPos_x with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mPos_y with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mDepth with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mGpsNorth with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mGpsEast with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mGpsValid with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mPhi with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mTheta with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mPsi with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mOmega_x with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mOmega_y with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mOmega_z with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mPsaRange with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mAltitude with 45366 elements.
Creating vector time with 45366 elements.
Creating vector mWaterSpeed with 45366 elements.
Creating vector time with 45366 elements.
Creating vector nfix with 45366 elements.
Creating vector time with 45366 elements.
Creating vector efix with 45366 elements.
Creating vector time with 45366 elements.
Creating vector filter_north with 45366 elements.
Creating vector time with 45366 elements.
Creating vector filter_east with 45366 elements.
Creating vector time with 45366 elements.
Creating vector filter_depth with 45366 elements.
Creating vector time with 45366 elements.
Creating vector north_current with 45366 elements.
Creating vector time with 45366 elements.
Creating vector east_current with 45366 elements.
Creating vector time with 45366 elements.
Creating vector speed_bias with 45366 elements.
Creating vector time with 45366 elements.
Creating vector heading_bias with 45366 elements.
Creating vector time with 45366 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/navigation.nc');
processNav(): median of positive valued depths = 120.801
processNav(): Finding depths less than 845.6069 and times > 0
processNav(): length(Nav.depth) = 45366
processNav(): length(gindx)     = 45366
 
Processing GPS navigation data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/gps.nc')
Creating vector time with 483 elements.
Creating vector UTCTime with 483 elements.
Creating vector time with 483 elements.
Creating vector latitude with 483 elements.
Creating vector time with 483 elements.
Creating vector longitude with 483 elements.
Creating vector time with 483 elements.
Creating vector quality with 483 elements.
Creating vector time with 483 elements.
Creating vector numberOfSatellites with 483 elements.
Creating vector time with 483 elements.
Creating vector hdop with 483 elements.
Creating vector time with 483 elements.
Creating vector antennaHeight with 483 elements.
Creating vector time with 483 elements.
Creating vector geoHeight with 483 elements.
Creating vector time with 483 elements.
Creating vector dgpsDataAge with 483 elements.
Creating vector time with 483 elements.
Creating vector dgpsRSID with 483 elements.
Creating vector time with 483 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/gps.nc');
 
Processing depth data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/parosci.nc')
Creating vector time with 45471 elements.
Creating vector depth with 45471 elements.
Creating vector time with 45471 elements.
Creating vector temp with 45471 elements.
Creating vector time with 45471 elements.
Creating vector pressure with 45471 elements.
Creating vector time with 45471 elements.
Creating vector temp_period with 45471 elements.
Creating vector time with 45471 elements.
Creating vector pres_period with 45471 elements.
Creating vector time with 45471 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/parosci.nc');
in processDepth.m
Before: min(Depth.data) = -0.32848 max(Depth.data) = 250.78
Found 0 bad (> 300 | < -1.0) depth values in Depth.data.  Replacing with NaNs
After: min(Depth.data) = -0.32848 max(Depth.data) = 250.78
 
Processing hs2 backscattering and chlorophyll fluorescence data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/hydroscatlog.nc')
Creating vector time with 36349 elements.
Creating vector Seconds with 36349 elements.
Creating vector time with 36349 elements.
Creating vector HundrethsOfSeconds with 36349 elements.
Creating vector time with 36349 elements.
Creating vector Snorm1 with 36349 elements.
Creating vector time with 36349 elements.
Creating vector Snorm2 with 36349 elements.
Creating vector time with 36349 elements.
Creating vector Snorm3 with 36349 elements.
Creating vector time with 36349 elements.
Creating vector Gain_Status_1 with 36349 elements.
Creating vector time with 36349 elements.
Creating vector Gain_Status_2 with 36349 elements.
Creating vector time with 36349 elements.
Creating vector Gain_Status_3 with 36349 elements.
Creating vector time with 36349 elements.
Creating vector RawDepthValue with 36349 elements.
Creating vector time with 36349 elements.
Creating vector RawTempValue with 36349 elements.
Creating vector time with 36349 elements.
Creating vector Temperature with 36349 elements.
Creating vector time with 36349 elements.
Creating vector ErrorValue with 36349 elements.
Creating vector time with 36349 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/hydroscatlog.nc');
 
Processing CTD #1 data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/ctdDriver.nc')
Creating vector time with 36301 elements.
Creating vector conductivity with 36301 elements.
Creating vector time with 36301 elements.
Creating vector temperature with 36301 elements.
Creating vector time with 36301 elements.
Creating vector cond_frequency with 36301 elements.
Creating vector time with 36301 elements.
Creating vector temp_frequency with 36301 elements.
Creating vector time with 36301 elements.
Creating vector spare with 36301 elements.
Creating vector time with 36301 elements.
Creating vector humidity with 36301 elements.
Creating vector time with 36301 elements.
Creating vector flow1 with 36301 elements.
Creating vector time with 36301 elements.
Creating vector OBS with 36301 elements.
Creating vector time with 36301 elements.
Creating vector dissolvedO2 with 36301 elements.
Creating vector time with 36301 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/ctdDriver.nc');
Obtaining calibration from http://ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/ctdDriver.cfg
Oxygen calibration loaded from CTD config file (current method)
Using constant flow rate offset for oxygen...
 
Processing CTD #2 data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/ctdDriver2.nc')
Creating vector time with 36302 elements.
Creating vector conductivity with 36302 elements.
Creating vector time with 36302 elements.
Creating vector temperature with 36302 elements.
Creating vector time with 36302 elements.
Creating vector cond_frequency with 36302 elements.
Creating vector time with 36302 elements.
Creating vector temp_frequency with 36302 elements.
Creating vector time with 36302 elements.
Creating vector flow2 with 36302 elements.
Creating vector time with 36302 elements.
Creating vector spare with 36302 elements.
Creating vector time with 36302 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/ctdDriver2.nc');
Obtaining calibration from http://ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/ctdDriver2.cfg
 
Processing ISUS data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/isuslog.nc')
Creating vector time with 5453 elements.
Creating vector isusNitrate with 5453 elements.
Creating vector time with 5453 elements.
Creating vector isusTemp with 5453 elements.
Creating vector time with 5453 elements.
Creating vector isusQuality with 5453 elements.
Creating vector time with 5453 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/isuslog.nc');
Total lag applied to nitrate = 6 seconds
 
Processing Biolume data...
[Warning: "/mbari/matlab/toolbox/matlab/demos" not found in path.] 
[> In rmpath (line 75)
  In processBiolume (line 21)
  In processAUVmission (line 220)
  In AUVprocess_main (line 225)] 
[Warning: "/mbari/matlabR2012a/toolbox/matlab/demos" not found in path.] 
[> In rmpath (line 75)
  In processBiolume (line 22)
  In processAUVmission (line 220)
  In AUVprocess_main (line 225)] 
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/biolume.nc')
Error: Error while reading the URL: http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/biolume.nc.dods?.
The OPeNDAP server returned the following message:
Not Found: The data source or server could not be found.
        Often this means that the OPeNDAP server is missing or needs attention;
        Please contact the server administrator.


att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/biolume.nc');
Error: Error while reading the URL: http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/biolume.nc.das.
The OPeNDAP server returned the following message:
Not Found: The data source or server could not be found.
        Often this means that the OPeNDAP server is missing or needs attention;
        Please contact the server administrator.


Could not read from biolume.nc returning NaNs for fields.
 
Processing LOPC plankton data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/lopc.nc')
Error: Error while reading the URL: http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/lopc.nc.dods?.
The OPeNDAP server returned the following message:
Not Found: The data source or server could not be found.
        Often this means that the OPeNDAP server is missing or needs attention;
        Please contact the server administrator.


att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/lopc.nc');
Error: Error while reading the URL: http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/lopc.nc.das.
The OPeNDAP server returned the following message:
Not Found: The data source or server could not be found.
        Often this means that the OPeNDAP server is missing or needs attention;
        Please contact the server administrator.


*** Setting lopc structure to NaNs. *** 
 
save /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003.308.02.mat BL CTD1 CTD2 hs2 ISUS Nav gps lopc
*************************************************************************
 
 
*************************************************************************
Processing AUV mission: 2003.308.04
Data path is http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/
Calibration path is http://ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/
Processing results path (data and metadata) is /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
Processing DVL navigation data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/navigation.nc')
Creating vector time with 78144 elements.
Creating vector mPos_x with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mPos_y with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mDepth with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mGpsNorth with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mGpsEast with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mGpsValid with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mPhi with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mTheta with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mPsi with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mOmega_x with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mOmega_y with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mOmega_z with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mPsaRange with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mAltitude with 78144 elements.
Creating vector time with 78144 elements.
Creating vector mWaterSpeed with 78144 elements.
Creating vector time with 78144 elements.
Creating vector nfix with 78144 elements.
Creating vector time with 78144 elements.
Creating vector efix with 78144 elements.
Creating vector time with 78144 elements.
Creating vector filter_north with 78144 elements.
Creating vector time with 78144 elements.
Creating vector filter_east with 78144 elements.
Creating vector time with 78144 elements.
Creating vector filter_depth with 78144 elements.
Creating vector time with 78144 elements.
Creating vector north_current with 78144 elements.
Creating vector time with 78144 elements.
Creating vector east_current with 78144 elements.
Creating vector time with 78144 elements.
Creating vector speed_bias with 78144 elements.
Creating vector time with 78144 elements.
Creating vector heading_bias with 78144 elements.
Creating vector time with 78144 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/navigation.nc');
processNav(): median of positive valued depths = 125.3781
processNav(): Finding depths less than 877.6465 and times > 0
processNav(): length(Nav.depth) = 78144
processNav(): length(gindx)     = 78144
 
Processing GPS navigation data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/gps.nc')
Creating vector time with 503 elements.
Creating vector UTCTime with 503 elements.
Creating vector time with 503 elements.
Creating vector latitude with 503 elements.
Creating vector time with 503 elements.
Creating vector longitude with 503 elements.
Creating vector time with 503 elements.
Creating vector quality with 503 elements.
Creating vector time with 503 elements.
Creating vector numberOfSatellites with 503 elements.
Creating vector time with 503 elements.
Creating vector hdop with 503 elements.
Creating vector time with 503 elements.
Creating vector antennaHeight with 503 elements.
Creating vector time with 503 elements.
Creating vector geoHeight with 503 elements.
Creating vector time with 503 elements.
Creating vector dgpsDataAge with 503 elements.
Creating vector time with 503 elements.
Creating vector dgpsRSID with 503 elements.
Creating vector time with 503 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/gps.nc');
 
Processing depth data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/parosci.nc')
Creating vector time with 78249 elements.
Creating vector depth with 78249 elements.
Creating vector time with 78249 elements.
Creating vector temp with 78249 elements.
Creating vector time with 78249 elements.
Creating vector pressure with 78249 elements.
Creating vector time with 78249 elements.
Creating vector temp_period with 78249 elements.
Creating vector time with 78249 elements.
Creating vector pres_period with 78249 elements.
Creating vector time with 78249 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/parosci.nc');
in processDepth.m
Before: min(Depth.data) = -0.36696 max(Depth.data) = 250.8448
Found 0 bad (> 300 | < -1.0) depth values in Depth.data.  Replacing with NaNs
After: min(Depth.data) = -0.36696 max(Depth.data) = 250.8448
 
Processing hs2 backscattering and chlorophyll fluorescence data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/hydroscatlog.nc')
Creating vector time with 62560 elements.
Creating vector Seconds with 62560 elements.
Creating vector time with 62560 elements.
Creating vector HundrethsOfSeconds with 62560 elements.
Creating vector time with 62560 elements.
Creating vector Snorm1 with 62560 elements.
Creating vector time with 62560 elements.
Creating vector Snorm2 with 62560 elements.
Creating vector time with 62560 elements.
Creating vector Snorm3 with 62560 elements.
Creating vector time with 62560 elements.
Creating vector Gain_Status_1 with 62560 elements.
Creating vector time with 62560 elements.
Creating vector Gain_Status_2 with 62560 elements.
Creating vector time with 62560 elements.
Creating vector Gain_Status_3 with 62560 elements.
Creating vector time with 62560 elements.
Creating vector RawDepthValue with 62560 elements.
Creating vector time with 62560 elements.
Creating vector RawTempValue with 62560 elements.
Creating vector time with 62560 elements.
Creating vector Temperature with 62560 elements.
Creating vector time with 62560 elements.
Creating vector ErrorValue with 62560 elements.
Creating vector time with 62560 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/hydroscatlog.nc');
 
Processing CTD #1 data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/ctdDriver.nc')
Creating vector time with 62526 elements.
Creating vector conductivity with 62526 elements.
Creating vector time with 62526 elements.
Creating vector temperature with 62526 elements.
Creating vector time with 62526 elements.
Creating vector cond_frequency with 62526 elements.
Creating vector time with 62526 elements.
Creating vector temp_frequency with 62526 elements.
Creating vector time with 62526 elements.
Creating vector spare with 62526 elements.
Creating vector time with 62526 elements.
Creating vector humidity with 62526 elements.
Creating vector time with 62526 elements.
Creating vector flow1 with 62526 elements.
Creating vector time with 62526 elements.
Creating vector OBS with 62526 elements.
Creating vector time with 62526 elements.
Creating vector dissolvedO2 with 62526 elements.
Creating vector time with 62526 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/ctdDriver.nc');
Obtaining calibration from http://ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/ctdDriver.cfg
Oxygen calibration loaded from CTD config file (current method)
Using constant flow rate offset for oxygen...
 
Processing CTD #2 data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/ctdDriver2.nc')
Creating vector time with 62524 elements.
Creating vector conductivity with 62524 elements.
Creating vector time with 62524 elements.
Creating vector temperature with 62524 elements.
Creating vector time with 62524 elements.
Creating vector cond_frequency with 62524 elements.
Creating vector time with 62524 elements.
Creating vector temp_frequency with 62524 elements.
Creating vector time with 62524 elements.
Creating vector flow2 with 62524 elements.
Creating vector time with 62524 elements.
Creating vector spare with 62524 elements.
Creating vector time with 62524 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/ctdDriver2.nc');
Obtaining calibration from http://ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/ctdDriver2.cfg
 
Processing ISUS data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/isuslog.nc')
Creating vector time with 9433 elements.
Creating vector isusNitrate with 9433 elements.
Creating vector time with 9433 elements.
Creating vector isusTemp with 9433 elements.
Creating vector time with 9433 elements.
Creating vector isusQuality with 9433 elements.
Creating vector time with 9433 elements.
att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/isuslog.nc');
Total lag applied to nitrate = 6 seconds
 
Processing Biolume data...
[Warning: "/mbari/matlab/toolbox/matlab/demos" not found in path.] 
[> In rmpath (line 75)
  In processBiolume (line 21)
  In processAUVmission (line 220)
  In AUVprocess_main (line 225)] 
[Warning: "/mbari/matlabR2012a/toolbox/matlab/demos" not found in path.] 
[> In rmpath (line 75)
  In processBiolume (line 22)
  In processAUVmission (line 220)
  In AUVprocess_main (line 225)] 
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/biolume.nc')
Error: Error while reading the URL: http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/biolume.nc.dods?.
The OPeNDAP server returned the following message:
Not Found: The data source or server could not be found.
        Often this means that the OPeNDAP server is missing or needs attention;
        Please contact the server administrator.


att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/biolume.nc');
Error: Error while reading the URL: http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/biolume.nc.das.
The OPeNDAP server returned the following message:
Not Found: The data source or server could not be found.
        Often this means that the OPeNDAP server is missing or needs attention;
        Please contact the server administrator.


Could not read from biolume.nc returning NaNs for fields.
 
Processing LOPC plankton data...
loaddap('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/lopc.nc')
Error: Error while reading the URL: http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/lopc.nc.dods?.
The OPeNDAP server returned the following message:
Not Found: The data source or server could not be found.
        Often this means that the OPeNDAP server is missing or needs attention;
        Please contact the server administrator.


att = loaddap('-A', 'http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/lopc.nc');
Error: Error while reading the URL: http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/lopc.nc.das.
The OPeNDAP server returned the following message:
Not Found: The data source or server could not be found.
        Often this means that the OPeNDAP server is missing or needs attention;
        Please contact the server administrator.


*** Setting lopc structure to NaNs. *** 
 
save /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003.308.04.mat BL CTD1 CTD2 hs2 ISUS Nav gps lopc
*************************************************************************
 
 
*************************************************************************
Calling build_auv_survey.m to construct survey file...

SecondaryDissolvedO2 =

     []

Reading: /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003.308.02.mat
Reading: /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003.308.04.mat
Calling matchDVLtoGPS to adjust dvl data in the underwater segments...
setting up UTM transformation using M_Map calls...
Looping over 11 segments.
Current plot held
Printing navigation adjust plot to /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_nav_adjust.png
Saving survey data to /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04.mat
Done saving to /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04.mat
 
 
*************************************************************************
Calling plot_sections from ../viz to produce section plots ...
Using median boxcar filter of vector...
Using mean boxcar filter of vector...
Number of profiles found = 52 Gridding with nix = 156, iZ = 498
Using mean boxcar filter of vector...
Using mean boxcar filter of vector...
Using max boxcar filter of vector...
Using max boxcar filter of vector...
Using max boxcar filter of vector...
Gridding...
   T
   S
   O
Using median boxcar filter of vector...
Using median boxcar filter of vector...
Using median boxcar filter of vector...
   bbp470
   bbp676
   fl676_uncorr
   N
   BL
Only one good point or fewer - NaNing the gBL array.
   BLflow
Only one good point or fewer - NaNing the gBLflow array.
   LOPC
Only one good point or fewer - NaNing the gLOPCcount array.
                             - NaNing the gLOPCtransCount array.
                             - NaNing the gLOPCnonTransCount array.
                             - NaNing the gLOPCLCcount array.
 
Masking and filtering with median filter of size 5...
  cvarname = gT
  cvarname = gS
  cvarname = gO
  cvarname = gN
  cvarname = gF
  cvarname = gB470
  cvarname = gB676
  cvarname = gBL
No valid data for gBL
  cvarname = gBLflow
No valid data for gBLflow
  cvarname = gLOPCcount
No valid data for gLOPCcount
  cvarname = gLOPCtransCount
No valid data for gLOPCtransCount
  cvarname = gLOPCnonTransCount
No valid data for gLOPCnonTransCount
  cvarname = gLOPCLCcount
No valid data for gLOPCLCcount
Encountered 0 NaN values in array of lon that is 111772 elements long
! gmt grdtrack -V ~/tmp/grdTrk.txt -GMonterey25.grd -bos >! ~/tmp/grdTrk.bath
grdtrack: Warning: -b option with type s, S, or D are deprecated; Use <n>f or <n>d, with w to indicate swab
grdtrack: Processing input grid(s)
grdtrack: Output 1 columns via binary records using format f
grdtrack: Sampled 111772 points from grid Monterey25.grd (2876 x 2447)
Executing: /bin/rm -f ../results/2003308_GulperTimes.txt && touch ../results/2003308_GulperTimes.txt
Getting mission start epoch seconds from: http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.02/navigation.nc.ascii?time[0:1:0]
Executing: perl parseGulper.pl -syslogFile /mbari/AUVCTD/missionlogs/2003/2003308/2003.308.02/syslog -startEsecs 1067987688.3509 -surveyName Dorado389_2003_308_02_308_04 >> ../results/2003308_GulperTimes.txt
Executing: removeGulpDups.py ../results/2003308_GulperTimes.txt
Getting mission start epoch seconds from: http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvctd/missionlogs/2003/2003308/2003.308.04/navigation.nc.ascii?time[0:1:0]
Executing: perl parseGulper.pl -syslogFile /mbari/AUVCTD/missionlogs/2003/2003308/2003.308.04/syslog -startEsecs 1067987688.3509 -surveyName Dorado389_2003_308_02_308_04 >> ../results/2003308_GulperTimes.txt
Executing: removeGulpDups.py ../results/2003308_GulperTimes.txt
Saving gridded, filtered data to /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_gridded.mat

outvarstr =

    'gF gT gN gS gD gO gB470 gB676 gBL gBLflow gLOPCcount gLOPCtransCount gLOPCnonTransCount gLOPCLCcount idist iZ auvnav distnav ilat ilon profDist profZ dists depths stride sdists sdepths fixLonSubIntrp fixLatSubIntrp GulperLocations bmask bdist bdepth fbdist fbdepth '

2Column contouring gridded variable gD
2Column contouring gridded variable gT
2Column contouring gridded variable gS
2Column contouring gridded variable gN
2Column contouring gridded variable gO
2Column contouring gridded variable gB470
2Column contouring gridded variable gB676
2Column contouring gridded variable gF
2Column contouring gridded variable gBL
Printing two column section summary to /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_2column.png
Elapsed time to save image: 5 seconds
Biolume contouring gridded variable gD
Biolume contouring gridded variable gT
Biolume contouring gridded variable gS
Biolume contouring gridded variable gN
Biolume contouring gridded variable gO
Biolume contouring gridded variable gB470
Biolume contouring gridded variable gB676
Biolume contouring gridded variable gF
Biolume contouring gridded variable gBL
Printing biolume section summary to /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_biolume.png
Elapsed time to save image: 27 seconds
2Column contouring gridded variable gLOPCcount
2Column contouring gridded variable gLOPCtransCount
2Column contouring gridded variable gLOPCnonTransCount
2Column contouring gridded variable gLOPCLCcount
2Column contouring gridded variable gT
2Column contouring gridded variable gB470
2Column contouring gridded variable gB676
2Column contouring gridded variable gF
2Column contouring gridded variable gBL
Printing two column section summary to /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_lopc.png
Elapsed time to save image: 5 seconds
 
 
*************************************************************************
Calling plot_survey_stats to produce histogram and profile statistics plots...
Printing section summary to /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_hist_stats.png
Printing section summary to /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_prof_stats.png
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_2column.png...
Copied to /mbari/AUVCTD/surveys/2003/images/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_biolume.png...
Copied to /mbari/AUVCTD/surveys/2003/images/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_lopc.png...
Copied to /mbari/AUVCTD/surveys/2003/images/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_nav_adjust.png...
Copied to /mbari/AUVCTD/surveys/2003/images/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_hist_stats.png...
Copied to /mbari/AUVCTD/surveys/2003/images/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_prof_stats.png...
Copied to /mbari/AUVCTD/surveys/2003/images/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
 
*************************************************************************
Writing KML files ...
KML = write_kml(survey_shrt_filename_base, 'Temperature', jetplus, varlimits(1,:), ctd1.T, time.ctd1, auvnav, depth.ctd1, resultspath);
  adding: u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Temperature.kml (deflated 93%)
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Temperature.kmz...
Copied to /mbari/AUVCTD/surveys/2003/kml/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
KML = write_kml(survey_shrt_filename_base, 'Salinity', jetplus, varlimits(2,:), ctd1.S, time.ctd1, auvnav, depth.ctd1, resultspath);
  adding: u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Salinity.kml (deflated 93%)
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Salinity.kmz...
Copied to /mbari/AUVCTD/surveys/2003/kml/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
KML = write_kml(survey_shrt_filename_base, 'Nitrate', jetplus, varlimits(3,:), isus.nitrate, time.isus, auvnav, depth.isus, resultspath);
  adding: u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Nitrate.kml (deflated 93%)
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Nitrate.kmz...
Copied to /mbari/AUVCTD/surveys/2003/kml/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
KML = write_kml(survey_shrt_filename_base, 'Oxygen', jetplus, varlimits(4,:), ctd1.O2, time.ctd1, auvnav, depth.ctd1, resultspath);
  adding: u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Oxygen.kml (deflated 93%)
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Oxygen.kmz...
Copied to /mbari/AUVCTD/surveys/2003/kml/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
KML = write_kml(survey_shrt_filename_base, 'Optical Backscatter @470 nm', jetplus, varlimits(5,:), hs2.bbp470, time.hs2, auvnav, depth.hs2, resultspath);
  adding: u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Optical_Backscatter_470_nm.kml (deflated 93%)
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Optical_Backscatter_470_nm.kmz...
Copied to /mbari/AUVCTD/surveys/2003/kml/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
KML = write_kml(survey_shrt_filename_base, 'Optical Backscatter @676 nm', jetplus, varlimits(6,:), hs2.bbp676, time.hs2, auvnav, depth.hs2, resultspath);
  adding: u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Optical_Backscatter_676_nm.kml (deflated 93%)
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Optical_Backscatter_676_nm.kmz...
Copied to /mbari/AUVCTD/surveys/2003/kml/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
KML = write_kml(survey_shrt_filename_base, 'Chlorophyll Fluorescence', jetplus, varlimits(7,:), hs2.fl676_uncorr, time.hs2, auvnav, depth.hs2, resultspath);
  adding: u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Chlorophyll_Fluorescence.kml (deflated 93%)
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Chlorophyll_Fluorescence.kmz...
Copied to /mbari/AUVCTD/surveys/2003/kml/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
KML = write_kml(survey_shrt_filename_base, 'Bioluminescence', jetplus, varlimits(8,:), biolume.biolume, time.biolume, auvnav, depth.biolume, resultspath);
length(v_esecs(gindx)) =   which is less than 2.  Not processing.
  adding: u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Bioluminescence.kml (deflated 94%)
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_Bioluminescence.kmz...
Copied to /mbari/AUVCTD/surveys/2003/kml/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
KML = write_kml(survey_shrt_filename_base, 'LOPC Total Count', jetplus, varlimits(9,:), lopc.countSum, time.lopc, auvnav, depth.lopc, resultspath);
length(v_esecs(gindx)) =   which is less than 2.  Not processing.
  adding: u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_LOPC_Total_Count.kml (deflated 94%)
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_LOPC_Total_Count.kmz...
Copied to /mbari/AUVCTD/surveys/2003/kml/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
Creating Dorado389_2003_308_02_308_04.kml file to hold all the variable .kmz files...
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04.kml...
Copied to /mbari/AUVCTD/surveys/2003/kml/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
[Warning: File
'/u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results//Dorado389_2003_308_02_308_04_LOPC_Total_Count.kml'
not found.] 
[> In create_data_products (line 414)
  In build_auv_survey (line 522)
  In AUVprocess_main (line 255)] 
 
 
*************************************************************************
Writing ODV file ...
Loading survey file /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04.mat ...
Iterpolating to isus time values...
Interpolating ctd1 temperature...
Interpolating ctd1 salinity...
Encountered 1422 NaN values in array of lon that is 14886 elements long
! gmt grdtrack -V ~/tmp/grdTrk.txt -GMonterey25.grd -bos >! ~/tmp/grdTrk.bath
grdtrack: Warning: -b option with type s, S, or D are deprecated; Use <n>f or <n>d, with w to indicate swab
grdtrack: Processing input grid(s)
grdtrack: Output 1 columns via binary records using format f
grdtrack: Sampled 13464 points from grid Monterey25.grd (2876 x 2447)
Number of depths returned from grdtrack = 13464 are not equal to number of Lat lon points = 14886
AUV track probably goes outside of the range of the .grd file being used.   Setting bottom depths to 1000 m
Writing to /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04.txt
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04.txt...
Copied to /mbari/AUVCTD/surveys/2003/odv/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_Gulper.txt...
Tried, but failed to copy to /mbari/AUVCTD/surveys/2003/odv/
cp: cannot stat ‘/u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_Gulper.txt’: No such file or directory
 
 
*************************************************************************
Writing decimated netCDF file ...
Iterpolating to isus time values...
Interpolating ctd1 temperature...
Interpolating ctd1 salinity...
Saving Global Attributes
Saving Variables and attributes
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_decim.nc...
Copied to /mbari/AUVCTD/surveys/2003/netcdf/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
 
*************************************************************************
Writing netCDF file ...
Saving Global Attributes
Saving Variables and attributes
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04.nc...
Copied to /mbari/AUVCTD/surveys/2003/netcdf/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04_gridded.mat...
Copied to /mbari/AUVCTD/surveys/2003/mat/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
 
*************************************************************************
Copying /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003_308_02_308_04.mat...
Copied to /mbari/AUVCTD/surveys/2003/mat/.  Removing from /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/
 
 
*************************************************************************
Composing email to send to mccann@mbari.org ...
!mail -s "Survey Dorado389_2003_308_02_308_04 processed" mccann@mbari.org < mail_Dorado389_2003_308_02_308_04.txt
Removing mission .mat files:
   /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003.308.02.mat
   /u/ssdsadmin/dev/auv_ctd/src/matlab/doradosdp/results/Dorado389_2003.308.04.mat
Processing time: 126 seconds