//
// PURPOSE: Trigger the first two on minimum fluorescence threshold and outlier
// rejection only.  Trigger the rest using the peak detection algorithm.
//
// AUTHORS: 1) Yanwu and Rob; 2 October 2009
//
// Omitting a threshold shuts it off.
//
// For outlier rejection, there must be ngood samples (that pass the
// threshold tests) out of the last nsamples to trigger a gulp.
//

flag_PTL_INL = 0;   // 0 = Phytoplankton Thin Layer (PTL); 1 = Intermediate Nepheloid Layer (INL)

flag_BaselineWindow_RunningOrSliding = 1; // Window type for calculating the signal baseline = %d (0 = from time zero to now; 1 = over a number of yo-yo profiles)

num_profiles_BaselineWindow = 10; // Number of yo-yo profiles to average for giving the signal background = %d (No more than 200. Used only when window type for calculating the signal baseline = 1)

flag_ClosenessOfTwoCrossings = 0;   // Whether requiring closeness of the 1st and 2nd crossings. 0 = No; 1 = Yes.

flag_PeaksAtSurface = 1;   // Whether peaks are likely to be at sea surface. 0 = No; 1 = Yes.

ratio_pktrigs_ctrltrigs = 10; // One control-triggering after every 3rd peak-triggering.

len_window_full = 8;

//timewindow_peakbaseline = 3600.0; // Seconds

timewindow_peakbaseline = 1200.0; // Seconds

alpha_fl	= 1.5;

alpha_bb	= 1.2;

beta_fl	= 0.6;

beta_bb	= 0.6;

delta_dep	= 0.5;		// Meters

delta_fl_bb_rise	= 1.0e-4;	// Raw fl676, or bb470, or bb676 measurement

delta_fl_bb_drop	= 1.0e-5;	// Raw fl676, or bb470, or bb676 measurement

dep_shallow_upwelling = 5.0; // In meters. Shallow depth bound for detecting an upwelling water column.

dep_deep_upwelling = 20.0; // In meters. Deep depth bound for detecting an upwelling water column

thresh_TempDiffInUpwelling = 1.0; // Deg. C. Threshold of temperature difference btn shallow and deep depths for detecting an upwelling water column.

thresh_NumProfilesInUpwelling = 5; // Minimum number of consecutive profiles for declaring an upwelling water column.

num_ProfilesAvgTempdiff = 5; // Number of profiles for averaging vertical temperature difference

num_ProfilesGap = 5; // Gap (in number of profiles) btn present profile and the last profile participating in averaging vertical temperature difference

step_TempDiffInFront = 0.2; // Deg. C. Step change of temperature difference btn shallow and deep depths for detecting a front

thresh_TempDiffInFront = 1.5; // Deg. C. Upper limit of temperature difference btn shallow and deep depths for detecting a front

thresh_NumProfilesInFront = 3; // Minimum number of consecutive profiles for declaring a front.

peakDetection0  = 1;
upwellingDetection0  = 0;
frontDetection0  = 0;
mindepth0     	= 1.5;         	// Meters
timemaxwait0    = 10800.0;       // Seconds

peakDetection1  = 1;
upwellingDetection1  = 0;
frontDetection1  = 0;
mindepth1     	= 1.5;         	// Meters
timelockoutpeak1    = 3600.0;       // Seconds
refGulperNumberTimeMaxWait1 = 0;
timemaxwait1    = 7200.0;       // Seconds

peakDetection2  = 1;
upwellingDetection2  = 0;
frontDetection2  = 0;
mindepth2     	= 1.5;         	// Meters
timelockoutpeak2    = 3600.0;       // Seconds
refGulperNumberTimeMaxWait2 = 1;
timemaxwait2    = 7200.0;       // Seconds

peakDetection3  = 0;
upwellingDetection3  = 0;
frontDetection3  = 1;
mindepth3     	= 1.5;         	// Meters
timelockoutfront3    = 300.0;       // Seconds
timemaxwait3    = 28800.0;       // Seconds

peakDetection4  = 0;
upwellingDetection4  = 0;
frontDetection4  = 1;
mindepth4     	= 1.5;         	// Meters
timelockoutfront4    = 300.0;       // Seconds
refGulperNumberTimeMaxWait4 = 3;
timemaxwait4    = 3600.0;       // Seconds

peakDetection5  = 0;
upwellingDetection5  = 0;
frontDetection5  = 1;
mindepth5     	= 1.5;         	// Meters
timelockoutfront5    = 300.0;       // Seconds
refGulperNumberTimeMaxWait5 = 4;
timemaxwait5    = 3600.0;       // Seconds

peakDetection6  = 0;
upwellingDetection6  = 0;
frontDetection6  = 1;
mindepth6     	= 1.5;         	// Meters
timelockoutfront6    = 300.0;       // Seconds
refGulperNumberTimeMaxWait6 = 5;
timemaxwait6    = 3600.0;       // Seconds

peakDetection7  = 0;
upwellingDetection7  = 1;
frontDetection7  = 0;
mindepth7     	= 10.0;         	// Meters
maxdepth7     	= 11.0;         	// Meters
timelockoutupwelling7    = 1000.0;       // Seconds
timemaxwait7    = 43200.0;       // Seconds

peakDetection8  = 0;
upwellingDetection8  = 1;
frontDetection8  = 0;
mindepth8     	= 10.0;         	// Meters
maxdepth8     	= 11.0;         	// Meters
timelockoutupwelling8    = 500.0;       // Seconds
refGulperNumberTimeMaxWait8 = 7;
timemaxwait8    = 7200.0;       // Seconds

peakDetection9  = 0;
upwellingDetection9  = 1;
frontDetection9  = 0;
mindepth9     	= 10.0;         	// Meters
maxdepth9     	= 11.0;         	// Meters
timelockoutupwelling9    = 500.0;       // Seconds
refGulperNumberTimeMaxWait9 = 8;
timemaxwait9    = 7200.0;       // Seconds