combineAll.pl(): Processing begun for hourly data set creation: Tue Aug  2 08:24:44 2011

combineAll.pl finds recently modified instrument netCDF files produced by DStoNetCDF.pl and
pulls out selected variables for gridding onto a common hourly time axis.
It constructs a Ferret journal file (the 'jnl' link), executes it to produce the
hourly data set.  Time series and special plots, e.g. the Wind T/S contour, are created.
All processing is submitted to SSDS for provenance tracking.

constructFerretJNL(): checking file /mbari/ssdsdata/deployments/m1/200910/m1_adcp1352_20091020.nc

constructFerretJNL(): checking file /mbari/ssdsdata/deployments/m1/200910/OS_MBARI-M1_20091020_R_TS.nc

constructFerretJNL(): checking file /mbari/ssdsdata/deployments/m1/200910/m1_gps1468_20091020.nc

constructFerretJNL(): checking file /mbari/ssdsdata/deployments/m1/200910/m1_metsys_20091020_original.nc

constructFerretJNL(): checking file /mbari/ssdsdata/deployments/m1/200910/m1_asimetswr_20091022.nc

constructFerretJNL(): checking file /mbari/ssdsdata/deployments/m1/200910/m1_pco2_20091020.nc

constructFerretJNL(): WARNING: different start dates for instrument pco2:  1st = 20091020, last = 20091022.  Using the first.
constructFerretJNL(): Salient Ferret commands (see .jnl link for full file):

USE "http://dods.mbari.org/opendap/data/ssdsdata/deployments/m1/200910/m1_adcp1352_20091020.nc"
SAVE/APPEND/FILE="/mbari/ssdsdata/deployments/m1/200910/OS_M1_20091020hourly_CMSTV.nc" eastward_sea_water_velocity_HR, northward_sea_water_velocity_HR
SAVE/APPEND/FILE="/mbari/ssdsdata/deployments/m1/200910/OS_M1_20091020hourly_CMSTV.nc" eastward_sea_water_velocity_HR_QC, northward_sea_water_velocity_HR_QC

USE "http://dods.mbari.org/opendap/data/ssdsdata/deployments/m1/200910/OS_MBARI-M1_20091020_R_TS.nc"
SAVE/APPEND/FILE="/mbari/ssdsdata/deployments/m1/200910/OS_M1_20091020hourly_CMSTV.nc" SEA_WATER_SALINITY_HR, SEA_WATER_TEMPERATURE_HR
SAVE/APPEND/FILE="/mbari/ssdsdata/deployments/m1/200910/OS_M1_20091020hourly_CMSTV.nc" sea_water_salinity_HR_QC, sea_water_temperature_HR_QC

USE "http://dods.mbari.org/opendap/data/ssdsdata/deployments/m1/200910/m1_gps1468_20091020.nc"
SAVE/APPEND/FILE="/mbari/ssdsdata/deployments/m1/200910/OS_M1_20091020hourly_CMSTV.nc"/LLIMITS=1:`eastward_sea_water_velocity_HR[d=1],RETURN=lend`/T="20-Oct-2009 19:00:00":"27-Oct-2010 15:00:00" GPS_LATITUDE_HR, GPS_LONGITUDE_HR
SAVE/APPEND/FILE="/mbari/ssdsdata/deployments/m1/200910/OS_M1_20091020hourly_CMSTV.nc" GPS_LATITUDE_HR_QC, GPS_LONGITUDE_HR_QC

USE "http://dods.mbari.org/opendap/data/ssdsdata/deployments/m1/200910/m1_metsys_20091020_original.nc"
SAVE/APPEND/FILE="/mbari/ssdsdata/deployments/m1/200910/OS_M1_20091020hourly_CMSTV.nc"/LLIMITS=1:`eastward_sea_water_velocity_HR[d=1],RETURN=lend`/T="20-Oct-2009 19:00:00":"27-Oct-2010 15:00:00" AIR_PRESSURE_HR, AIR_TEMPERATURE_HR, EASTWARD_WIND_HR, NORTHWARD_WIND_HR, WIND_SPEED_HR
SAVE/APPEND/FILE="/mbari/ssdsdata/deployments/m1/200910/OS_M1_20091020hourly_CMSTV.nc" air_pressure_HR_QC, air_temperature_HR_QC, eastward_wind_HR_QC, northward_wind_HR_QC

USE "http://dods.mbari.org/opendap/data/ssdsdata/deployments/m1/200910/m1_asimetswr_20091022.nc"
SAVE/APPEND/FILE="/mbari/ssdsdata/deployments/m1/200910/OS_M1_20091020hourly_CMSTV.nc"/LLIMITS=1:`eastward_sea_water_velocity_HR[d=1],RETURN=lend`/T="22-Oct-2009 17:00:00":"27-Oct-2010 15:00:00" SW_FLUX_HR
SAVE/APPEND/FILE="/mbari/ssdsdata/deployments/m1/200910/OS_M1_20091020hourly_CMSTV.nc" sw_flux_HR_QC

USE "http://dods.mbari.org/opendap/data/ssdsdata/deployments/m1/200910/m1_pco2_20091020.nc"
SAVE/APPEND/FILE="/mbari/ssdsdata/deployments/m1/200910/OS_M1_20091020hourly_CMSTV.nc" DELTA_PCO2_PPM_HR
SAVE/APPEND/FILE="/mbari/ssdsdata/deployments/m1/200910/OS_M1_20091020hourly_CMSTV.nc" DELTA_PCO2_PPM_HR_QC

constructFerretJNL(): hourlyJnlFile = /mbari/ssdsdata/deployments/m1/200910/OS_M1_20091020hourly_CMSTV.jnl
combineAll.pl: Doing hourly plots and submitting ProcessRun to SSDS with libraryName = /home/cvs/DPforSSDS/cimt/combineAll.pl
combineAll.pl: Processing finished: Tue Aug  2 08:25:40 2011